LOC108197103 cDNA ORF clone, Daucus carota subsp. sativus

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108197103
Entrez Gene ID	108197103
Full Name	ESX-3 secretion system protein EccA3
Gene Type	protein-coding
Organism	Daucus carota subsp. sativus

mRNA and Protein(s)

mRNA	Protein	Name
XM_017364611.1	XP_017220100.1	ESX-3 secretion system protein EccA3

Pathways from BioSystems
Gene Ontology

The following LOC108197103 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108197103 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa92675	XM_017364611.1 Latest version!	Daucus carota subsp. sativus ESX-3 secretion system protein EccA3 (LOC108197103), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108197103 ( XM_017364611.1 ) cDNA ORF clone, Daucus carota subsp. sativus -> XP_017220100.1 Daucus carota subsp. sativus ESX-3 secretion system protein EccA3 (LOC108197103), mRNA.

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CloneID	ODa92675
Clone ID Related Accession (Same CDS sequence)	XM_017364611.1
Accession Version	XM_017364611.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1449bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-26
Organism	Daucus carota subsp. sativus
Product	ESX-3 secretion system protein EccA3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030388.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Daucus carota subsp. sativus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGAGGA ATAACAAGCA AGATCAACGG GCAAGATCTG CCAAGCCCAA CACCCTTCAT 
GGATGTGCTC AAGCTGGAGA TCTCAATGGA TTTTTGAAGC TTCTTAAAGA CAACCCTTCT 
CTTGTTAATG ATCGCAACCC TGTTATGGCA CATACACCTC TTCATGTCTG TGCTGGTCAC 
AATAGTGTTG AGATAGTTAA AGTTCTGCTT GACTGGCAAG GATCAGAAAA GGTTGAATTG 
GAAGCCAAGA ACATGTATGG TGAAACTCCT CTTCATATGG CTGCTAAGAA TGGTTGCAAT 
CAGGCTGCAC AAATGCTTCT TTCTCATGGT GCTTCAGTTG AAGCCAAAGC AAATAATGGG 
ATGACTCCGT TGCACCTTGC AGTTTGGCAC TCAACACGAT CTGAAGAAGA TTGTTCTACT 
GTTCAGACAT TGCTCGAGTA TAATGCAGAT TGCAGTGCCA AAGACAATGA GGGCATGACT 
CCGTTGAACC ATCTGTCACA AGGACCTGGA AATGAGAAAC TGCGGAAACT TCTAAATTCG 
TATCTTGAGG AGCAGAGAAA ACGGAGGGCT ATTGAAGCAT GTAGTCAGAC AAAAGCGAAG 
ATGGATGAAC TTGAGAATGA GTTGTCTAAA ATTGTTGGTC TGGATGACCT AAAGTTACAA 
CTCCGGAAAT GGGCAAAGGG GATGCTTTTG GATGAGAGGC GTAGGGCCCT TGGGCTGAAA 
GTTGGTGCTC GGAGACCTCC TCATATGGCC TTCCTTGGTA ATCCTGGTAC AGGTAAAACT 
ATGGTTGCTA GAATTCTTGG AAAATTACTC TACATGGTGG GCATTTTACC CACTGACAAG 
GTAACAGAAG TACAAAGAAC TGATTTGGTT GGGGAATTCG TAGGCCATAC TGGACCGAAG 
ACCAGGAAAA TGATTAAAGA AGCAGAAGGA GGTATTCTAT TTGTAGATGA AGCATATCGA 
CTAATACCTA TGCAGAAGTC GGATGATAAG GATTATGGAT TGGAAGCTTT AGAGGAGATA 
ATGTCAGTCA TGGACAGTGG AAAAATTGTG GTAATTTTTG CAGGCTATAG CGAACCAATG 
AAGCGTGTTA TTACATCTAA TGAAGGTTTC TGCAGAAGGG TTACCAAGTT CTTCAACTTT 
GAGGACTTCA GTTCTGAAGA CCTTGCGAGA ATCCTTCATC TTAAGATGAA TAGTGTAGCC 
GAGGGTAGTT TGCTATATGG ATTTAAGTTG CATCCTTTGT GTACCATTGA AGCCATTGTA 
TCATTGATAG AGAGAGAAAC AACTGAAAAG CAGCGAAGAG AGATGAATGG AGGTTTGGTA 
GATCCGATGC TAGTTAATGC CAGAGAGTAT CTGGACTTGA GGCTCGATTT TGATTGTATA 
GACACAGATG AGCTGCTTAC CATCAGAATA GAGGACTTAG AAGGGGGGCT TCGTGTATTA 
TCTCACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017220100.1
CDS	212..1660
Translation	MLRNNKQDQRARSAKPNTLHGCAQAGDLNGFLKLLKDNPSLVNDRNPVMAHTPLHVCAGHNSVEIVKVLLDWQGSEKVELEAKNMYGETPLHMAAKNGCNQAAQMLLSHGASVEAKANNGMTPLHLAVWHSTRSEEDCSTVQTLLEYNADCSAKDNEGMTPLNHLSQGPGNEKLRKLLNSYLEEQRKRRAIEACSQTKAKMDELENELSKIVGLDDLKLQLRKWAKGMLLDERRRALGLKVGARRPPHMAFLGNPGTGKTMVARILGKLLYMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKMIKEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSEPMKRVITSNEGFCRRVTKFFNFEDFSSEDLARILHLKMNSVAEGSLLYGFKLHPLCTIEAIVSLIERETTEKQRREMNGGLVDPMLVNAREYLDLRLDFDCIDTDELLTIRIEDLEGGLRVLSH

Target ORF information:

RefSeq Version	XM_017364611.1
Organism	Daucus carota subsp. sativus
Definition	Daucus carota subsp. sativus ESX-3 secretion system protein EccA3 (LOC108197103), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017364611.1

ORF Insert Sequence:

ATGCTGAGGA ATAACAAGCA AGATCAACGG GCAAGATCTG CCAAGCCCAA CACCCTTCAT 
GGATGTGCTC AAGCTGGAGA TCTCAATGGA TTTTTGAAGC TTCTTAAAGA CAACCCTTCT 
CTTGTTAATG ATCGCAACCC TGTTATGGCA CATACACCTC TTCATGTCTG TGCTGGTCAC 
AATAGTGTTG AGATAGTTAA AGTTCTGCTT GACTGGCAAG GATCAGAAAA GGTTGAATTG 
GAAGCCAAGA ACATGTATGG TGAAACTCCT CTTCATATGG CTGCTAAGAA TGGTTGCAAT 
CAGGCTGCAC AAATGCTTCT TTCTCATGGT GCTTCAGTTG AAGCCAAAGC AAATAATGGG 
ATGACTCCGT TGCACCTTGC AGTTTGGCAC TCAACACGAT CTGAAGAAGA TTGTTCTACT 
GTTCAGACAT TGCTCGAGTA TAATGCAGAT TGCAGTGCCA AAGACAATGA GGGCATGACT 
CCGTTGAACC ATCTGTCACA AGGACCTGGA AATGAGAAAC TGCGGAAACT TCTAAATTCG 
TATCTTGAGG AGCAGAGAAA ACGGAGGGCT ATTGAAGCAT GTAGTCAGAC AAAAGCGAAG 
ATGGATGAAC TTGAGAATGA GTTGTCTAAA ATTGTTGGTC TGGATGACCT AAAGTTACAA 
CTCCGGAAAT GGGCAAAGGG GATGCTTTTG GATGAGAGGC GTAGGGCCCT TGGGCTGAAA 
GTTGGTGCTC GGAGACCTCC TCATATGGCC TTCCTTGGTA ATCCTGGTAC AGGTAAAACT 
ATGGTTGCTA GAATTCTTGG AAAATTACTC TACATGGTGG GCATTTTACC CACTGACAAG 
GTAACAGAAG TACAAAGAAC TGATTTGGTT GGGGAATTCG TAGGCCATAC TGGACCGAAG 
ACCAGGAAAA TGATTAAAGA AGCAGAAGGA GGTATTCTAT TTGTAGATGA AGCATATCGA 
CTAATACCTA TGCAGAAGTC GGATGATAAG GATTATGGAT TGGAAGCTTT AGAGGAGATA 
ATGTCAGTCA TGGACAGTGG AAAAATTGTG GTAATTTTTG CAGGCTATAG CGAACCAATG 
AAGCGTGTTA TTACATCTAA TGAAGGTTTC TGCAGAAGGG TTACCAAGTT CTTCAACTTT 
GAGGACTTCA GTTCTGAAGA CCTTGCGAGA ATCCTTCATC TTAAGATGAA TAGTGTAGCC 
GAGGGTAGTT TGCTATATGG ATTTAAGTTG CATCCTTTGT GTACCATTGA AGCCATTGTA 
TCATTGATAG AGAGAGAAAC AACTGAAAAG CAGCGAAGAG AGATGAATGG AGGTTTGGTA 
GATCCGATGC TAGTTAATGC CAGAGAGTAT CTGGACTTGA GGCTCGATTT TGATTGTATA 
GACACAGATG AGCTGCTTAC CATCAGAATA GAGGACTTAG AAGGGGGGCT TCGTGTATTA 
TCTCACTGA