ORF » Species Summary » Danio rerio » ZGC:109965 cDNA ORF clone

ZGC:109965 cDNA ORF clone, Danio rerio(Zebrafish)

The following ZGC:109965 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ZGC:109965 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa32018 NM_001033747.1
Latest version!		 Danio rerio zgc:109965 (zgc:109965), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
ODa46365 XM_009295215.3
Latest version!		 Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
View Old Accession Versions >>
ODa46365 XM_009295215.2 Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    ZGC:109965 ( NM_001033747.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_001028919.1 Danio rerio zgc:109965 (zgc:109965), mRNA.
    Price & Availability↑
    CloneID ODa32018
    Clone ID Related Accession (Same CDS sequence) NM_001033747.1
    Accession Version NM_001033747.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1656bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC619266 precursor
    Comment Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC096789.1. ##Evidence-Data-START## Transcript exon combination :: BC096789.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168447, SAMEA2168448 [ECO:0000350] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGACTGTGA GAAGCTCGTC AGTGGCGGCG CTGCTGCTGC TCTCAGTGCA TCTCCTGCAT 
    GCGTCTGCTC TTCCTGCTGC GTCTTCATAT GAGTTCAACG CCTACAGGAT GCAGCACTAC 
    AACCTACATC AACACAAACA TGGCTGTCGT GGCGCTATTG TGGTGGCGGA GGCAAGATCG 
    GCAGCAGACA CGAGTTTGAC CCGCCGCTGT GTGATCATGA AGCTACTCGA TTTTTCCACA 
    GAGAGATTCC TGGAGGCCAA AAAACAGAAC GCAGCAGCAG TTTTGATCCT GCTACCTCAA 
    AATCTCTCGT CTGTACAAGA GGAGACAGTG CAGGGCTTCA TGGTGGCTGA AGCTCAGATA 
    CTGCAGGAGG AGACCATCTT GCCGGTGTAT GTTGTCCCTG AGGATGAGCA GCTTCTCTGT 
    ATGTATGAAG AAGTCAATCA GGCTGTGGCA TCCAAGTCTG CTTCTGTGCT GGTGAGAGTT 
    CTCCGTAGTA TGATCACATC CACTGCCTTC CAAATATTAG TGAGCAACAA TTCCCCCATC 
    AAGCCCATTG CTGACACCAG CATCATTACT TTAGAGGGAG TACTTCCTGG AGCTGGAGAA 
    GACCCACCCA CTATTGTAAT TACAGCCCAT TTTGACACGT TCGGTCTTGC TCCTTGGCTG 
    GCGTATGGTG CAGACTCTAA TGGCAGCGGT GTCGCTATTC TTCTCGAGTT GGTTCGACTC 
    TTTCATCGTC TCTACAGTAA TCCACGAAGC CAGGCTCCAT ACCATCTTTT ATTCTCCTTG 
    ACTGGTGGTG GGAAATATAA CTTTCTTGGG ACTAAGCATT GGTTGGAGGA AAACATGGAC 
    CATGCAGAAT CCAGTCTTTT GCATGACAAT GTGGAGTTTG TTATCTGTCT TGACTCTCTT 
    GGCACGGGGG ATGAGATTTT CCTGCATGTT TCGCGGCCAC CTAAGCCTGG CACGCCTCAG 
    TACAGCTTTA TCCAGCAGCT GGAGCAGATA ATCTCTGCTA GGTTCCCCTG GGTGAGATTT 
    GGAACGGTTC ATAAGAAAAT CAACTTGCAG GAGACCAATG TGGCTTGGGA GCATGAGCGA 
    TATGGCATGA AACGTATCCC AGGATTCACT CTGTCACACA TCGAGAACCC TAAATCAGAG 
    CTTAGAGGAT CTATCCTTGA CACCATTGCA CAAGTGGACA TGAGGAAACT CAAGCGGAAC 
    ACAGTTATTG TTGCTGAGTC CTTGGCAAGA TTCATGTACA ATCTTTCAGA CAAGGGCTCT 
    GCTAAGGACA TGCAGGTTTT CAAGGGCAGT TTGGATATTC AAGACAGCCG TTTGTCTGCA 
    CTGATGACCA TGTTGACGTC TGTTCCCCGA GCTGTTCAAC TTCTGGACAG AGAACCAGAA 
    CACACACTCT TGATCAACAG CCTGGAGCAG GAGTTCAAAC ATTATCTAAA GCAGGTCCAC 
    AAACACACGT TTCACCAGGA CCGAAGAGAC CCTGAAATCA CTTTCTTCGA TCAAATGAAG 
    CAACCAATGA TGATGTACAG GGTGAAGCCT GCTGCCTTTG ACCTATTTTT GGGTGGTTGT 
    ATTGCTGGAT ACCTTGGAAT AGTTTATTAT GGAATCCAGA ACTTTGGGAA CGTCTACACG 
    AAACTGAAAG CAACCATGAA AGCCAAGCAC CAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001028919.1
    CDS115..1770
    Translation

    Target ORF information:

    RefSeq Version NM_001033747.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio zgc:109965 (zgc:109965), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001033747.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGACTGTGA GAAGCTCGTC AGTGGCGGCG CTGCTGCTGC TCTCAGTGCA TCTCCTGCAT 
    GCGTCTGCTC TTCCTGCTGC GTCTTCATAT GAGTTCAACG CCTACAGGAT GCAGCACTAC 
    AACCTACATC AACACAAACA TGGCTGTCGT GGCGCTATTG TGGTGGCGGA GGCAAGATCG 
    GCAGCAGACA CGAGTTTGAC CCGCCGCTGT GTGATCATGA AGCTACTCGA TTTTTCCACA 
    GAGAGATTCC TGGAGGCCAA AAAACAGAAC GCAGCAGCAG TTTTGATCCT GCTACCTCAA 
    AATCTCTCGT CTGTACAAGA GGAGACAGTG CAGGGCTTCA TGGTGGCTGA AGCTCAGATA 
    CTGCAGGAGG AGACCATCTT GCCGGTGTAT GTTGTCCCTG AGGATGAGCA GCTTCTCTGT 
    ATGTATGAAG AAGTCAATCA GGCTGTGGCA TCCAAGTCTG CTTCTGTGCT GGTGAGAGTT 
    CTCCGTAGTA TGATCACATC CACTGCCTTC CAAATATTAG TGAGCAACAA TTCCCCCATC 
    AAGCCCATTG CTGACACCAG CATCATTACT TTAGAGGGAG TACTTCCTGG AGCTGGAGAA 
    GACCCACCCA CTATTGTAAT TACAGCCCAT TTTGACACGT TCGGTCTTGC TCCTTGGCTG 
    GCGTATGGTG CAGACTCTAA TGGCAGCGGT GTCGCTATTC TTCTCGAGTT GGTTCGACTC 
    TTTCATCGTC TCTACAGTAA TCCACGAAGC CAGGCTCCAT ACCATCTTTT ATTCTCCTTG 
    ACTGGTGGTG GGAAATATAA CTTTCTTGGG ACTAAGCATT GGTTGGAGGA AAACATGGAC 
    CATGCAGAAT CCAGTCTTTT GCATGACAAT GTGGAGTTTG TTATCTGTCT TGACTCTCTT 
    GGCACGGGGG ATGAGATTTT CCTGCATGTT TCGCGGCCAC CTAAGCCTGG CACGCCTCAG 
    TACAGCTTTA TCCAGCAGCT GGAGCAGATA ATCTCTGCTA GGTTCCCCTG GGTGAGATTT 
    GGAACGGTTC ATAAGAAAAT CAACTTGCAG GAGACCAATG TGGCTTGGGA GCATGAGCGA 
    TATGGCATGA AACGTATCCC AGGATTCACT CTGTCACACA TCGAGAACCC TAAATCAGAG 
    CTTAGAGGAT CTATCCTTGA CACCATTGCA CAAGTGGACA TGAGGAAACT CAAGCGGAAC 
    ACAGTTATTG TTGCTGAGTC CTTGGCAAGA TTCATGTACA ATCTTTCAGA CAAGGGCTCT 
    GCTAAGGACA TGCAGGTTTT CAAGGGCAGT TTGGATATTC AAGACAGCCG TTTGTCTGCA 
    CTGATGACCA TGTTGACGTC TGTTCCCCGA GCTGTTCAAC TTCTGGACAG AGAACCAGAA 
    CACACACTCT TGATCAACAG CCTGGAGCAG GAGTTCAAAC ATTATCTAAA GCAGGTCCAC 
    AAACACACGT TTCACCAGGA CCGAAGAGAC CCTGAAATCA CTTTCTTCGA TCAAATGAAG 
    CAACCAATGA TGATGTACAG GGTGAAGCCT GCTGCCTTTG ACCTATTTTT GGGTGGTTGT 
    ATTGCTGGAT ACCTTGGAAT AGTTTATTAT GGAATCCAGA ACTTTGGGAA CGTCTACACG 
    AAACTGAAAG CAACCATGAA AGCCAAGCAC CAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    ZGC:109965 ( XM_009295215.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009293490.1 Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa46365
    Clone ID Related Accession (Same CDS sequence) XM_009295215.3 , XM_009295215.2
    Accession Version XM_009295215.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1827bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC619266 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009295215.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGTGCGAA AGGCTTACCT GCGGCCCTCT TTAAGCCTCG TTCCGGCCAT GCTTTGGACA 
    TCACATCCTA TTCAGAGCAG AAGACGGAGC GTTTTGCACA CGAGGACCAT CTATCGTGGA 
    GTTTGGATGT GTTGTTGGTT AGTGTGTTGG ACTCAGATGT GTGTTGCGAA GATGACTGTG 
    AGAAGCTCGT CAGTGGCGGC GCTGCTGCTG CTCTCAGTGC ATCTCCTGCA TGCGTCTGCT 
    CTTCCTGCTG CGTCTTCATA TGAGTTCAAC GCCTACAGGA TGCAGCACTA CAACCTACAT 
    CAACACAAAC ATGGCTGTCG TGGCGCTATT GTGGTGGCGG AGGCAAGATC GGCAGCAGAC 
    ACGAGTTTGA CCCGCCGCTG TGTGATCATG AAGCTACTCG ATTTTTCCAC AGAGAGATTC 
    CTGGAGGCCA AAAAACAGAA CGCAGCAGCA GTTTTGATCC TGCTACCTCA AAATCTCTCG 
    TCTGTACAAG AGGAGACAGT GCAGGGCTTC ATGGTGGCTG AAGCTCAGAT CCTGCAGGAG 
    GAGACCATCT TGCCGGTGTA TGTTGTCCCT GAGGATGAGC AGCTTCTCTG TATGTATGAA 
    GAAGTCAATC AGGCTGTGGC ATCCAAGTCT GCTTCTGTGC TGGTGAGAGT TCTCCGTAGT 
    ATGATCACAT CCACTGCCTT CCAAATATTA GTGAGCAATA ATTCCCCCAT CAAGCCCATT 
    ACTGACACCA GCATCATTAC TTTAGAGGGA GTACTTCCTG GAGCTGGAGA AGACCCACCC 
    ACTATTGTAA TTACAGCCCA TTTTGACACG TTCGGTCTTG CTCCTTGGCT GGCGTATGGT 
    GCAGACTCTA ATGGCAGCGG TGTCGCTATT CTTCTCGAGT TGGTTCGACT CTTTCATCGT 
    CTCAACAGTA ATCCACGAAG CCAGGCTCCA TACCATCTTT TATTCTCCTT GACTGGTGGT 
    GGGAAATATA ACTTTCTTGG GACTAAGCAT TGGTTGGAGG AAAACATGGA CCATGCAGAA 
    TCCAGTCTTT TGCATGACAA TGTGGAGTTT GTTATCTGTC TTGACTCTCT TGGCACGGGG 
    GATGAGATTT TCCTGCATGT TTCGCGGCCA CCTAAGCCTG GCACGCCTCA GTACAGCTTT 
    ATTCAGCAAC TGGAGCAGAT AATCTCTGCC AGGTTCCCCT GGGTAAGATT TGGAACGGTT 
    CATAAGAAGA TCAACTTGCA GGAGACCAAT GTGGCTTGGG AGCATGAGCG TTATGGCATG 
    AAACGTATCC CAGGATTCAC TCTGTCACAC ATCGAGAACC CTAAATCAGA GCTTAGAGGA 
    TCTATCCTTG ACACCATTGC ACAAGTGGAC ATGAGGAAAC TCAAGCGGAA CACAGTTATT 
    GTTGCTGAGT CCTTGGCAAG ATTCATGTAC AATCTTTCAG ACAAGGGCTC TGCTAAGGAC 
    ATGCAGGTTT TCAAGGGCAG TTTGGATATT CAAGACAGCC GTTTGTCTGC ACTGATGACC 
    ATGTTGACGT CAGTTCCCCG AGCTGTTCAA CTTCTAGACA GAGAACCAGA ACACACACTC 
    TTGATCAACA GCCTGGAGCA GGAGTTCAAA CATTATCTAA AGCAGGTCCA CAAACACACG 
    TTTCACCAGG ACCGAAGAGA CCCTGAAATC ACTTTCTTCG ATCAAATGAA GCAACCAATG 
    ATGATGTACA GGGTGAAGCC TGCTGCCTTT GACCTATTTT TGGGTGGTTG TATTGCTGGA 
    TACCTTGGAA TAGTTTATTA TGGAATCCAG AACTTTGGGA ACGTCTACAC GAAACTGAAA 
    GCATCCATGA AAGCCAAGCA CCAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009293490.1
    CDS16..1842
    Translation

    Target ORF information:

    RefSeq Version XM_009295215.3
    Organism Danio rerio(zebrafish)
    Definition Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_009295215.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGTGCGAA AGGCTTACCT GCGGCCCTCT TTAAGCCTCG TTCCGGCCAT GCTTTGGACA 
    TCACATCCTA TTCAGAGCAG AAGACGGAGC GTTTTGCACA CGAGGACCAT CTATCGTGGA 
    GTTTGGATGT GTTGTTGGTT AGTGTGTTGG ACTCAGATGT GTGTTGCGAA GATGACTGTG 
    AGAAGCTCGT CAGTGGCGGC GCTGCTGCTG CTCTCAGTGC ATCTCCTGCA TGCGTCTGCT 
    CTTCCTGCTG CGTCTTCATA TGAGTTCAAC GCCTACAGGA TGCAGCACTA CAACCTACAT 
    CAACACAAAC ATGGCTGTCG TGGCGCTATT GTGGTGGCGG AGGCAAGATC GGCAGCAGAC 
    ACGAGTTTGA CCCGCCGCTG TGTGATCATG AAGCTACTCG ATTTTTCCAC AGAGAGATTC 
    CTGGAGGCCA AAAAACAGAA CGCAGCAGCA GTTTTGATCC TGCTACCTCA AAATCTCTCG 
    TCTGTACAAG AGGAGACAGT GCAGGGCTTC ATGGTGGCTG AAGCTCAGAT CCTGCAGGAG 
    GAGACCATCT TGCCGGTGTA TGTTGTCCCT GAGGATGAGC AGCTTCTCTG TATGTATGAA 
    GAAGTCAATC AGGCTGTGGC ATCCAAGTCT GCTTCTGTGC TGGTGAGAGT TCTCCGTAGT 
    ATGATCACAT CCACTGCCTT CCAAATATTA GTGAGCAATA ATTCCCCCAT CAAGCCCATT 
    ACTGACACCA GCATCATTAC TTTAGAGGGA GTACTTCCTG GAGCTGGAGA AGACCCACCC 
    ACTATTGTAA TTACAGCCCA TTTTGACACG TTCGGTCTTG CTCCTTGGCT GGCGTATGGT 
    GCAGACTCTA ATGGCAGCGG TGTCGCTATT CTTCTCGAGT TGGTTCGACT CTTTCATCGT 
    CTCAACAGTA ATCCACGAAG CCAGGCTCCA TACCATCTTT TATTCTCCTT GACTGGTGGT 
    GGGAAATATA ACTTTCTTGG GACTAAGCAT TGGTTGGAGG AAAACATGGA CCATGCAGAA 
    TCCAGTCTTT TGCATGACAA TGTGGAGTTT GTTATCTGTC TTGACTCTCT TGGCACGGGG 
    GATGAGATTT TCCTGCATGT TTCGCGGCCA CCTAAGCCTG GCACGCCTCA GTACAGCTTT 
    ATTCAGCAAC TGGAGCAGAT AATCTCTGCC AGGTTCCCCT GGGTAAGATT TGGAACGGTT 
    CATAAGAAGA TCAACTTGCA GGAGACCAAT GTGGCTTGGG AGCATGAGCG TTATGGCATG 
    AAACGTATCC CAGGATTCAC TCTGTCACAC ATCGAGAACC CTAAATCAGA GCTTAGAGGA 
    TCTATCCTTG ACACCATTGC ACAAGTGGAC ATGAGGAAAC TCAAGCGGAA CACAGTTATT 
    GTTGCTGAGT CCTTGGCAAG ATTCATGTAC AATCTTTCAG ACAAGGGCTC TGCTAAGGAC 
    ATGCAGGTTT TCAAGGGCAG TTTGGATATT CAAGACAGCC GTTTGTCTGC ACTGATGACC 
    ATGTTGACGT CAGTTCCCCG AGCTGTTCAA CTTCTAGACA GAGAACCAGA ACACACACTC 
    TTGATCAACA GCCTGGAGCA GGAGTTCAAA CATTATCTAA AGCAGGTCCA CAAACACACG 
    TTTCACCAGG ACCGAAGAGA CCCTGAAATC ACTTTCTTCG ATCAAATGAA GCAACCAATG 
    ATGATGTACA GGGTGAAGCC TGCTGCCTTT GACCTATTTT TGGGTGGTTG TATTGCTGGA 
    TACCTTGGAA TAGTTTATTA TGGAATCCAG AACTTTGGGA ACGTCTACAC GAAACTGAAA 
    GCATCCATGA AAGCCAAGCA CCAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    ZGC:109965 ( XM_009295215.2 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009293490.1 Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa46365
    Clone ID Related Accession (Same CDS sequence) XM_009295215.3 , XM_009295215.2
    Accession Version XM_009295215.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1827bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product uncharacterized protein LOC619266 isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009295215.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGTGCGAA AGGCTTACCT GCGGCCCTCT TTAAGCCTCG TTCCGGCCAT GCTTTGGACA 
    TCACATCCTA TTCAGAGCAG AAGACGGAGC GTTTTGCACA CGAGGACCAT CTATCGTGGA 
    GTTTGGATGT GTTGTTGGTT AGTGTGTTGG ACTCAGATGT GTGTTGCGAA GATGACTGTG 
    AGAAGCTCGT CAGTGGCGGC GCTGCTGCTG CTCTCAGTGC ATCTCCTGCA TGCGTCTGCT 
    CTTCCTGCTG CGTCTTCATA TGAGTTCAAC GCCTACAGGA TGCAGCACTA CAACCTACAT 
    CAACACAAAC ATGGCTGTCG TGGCGCTATT GTGGTGGCGG AGGCAAGATC GGCAGCAGAC 
    ACGAGTTTGA CCCGCCGCTG TGTGATCATG AAGCTACTCG ATTTTTCCAC AGAGAGATTC 
    CTGGAGGCCA AAAAACAGAA CGCAGCAGCA GTTTTGATCC TGCTACCTCA AAATCTCTCG 
    TCTGTACAAG AGGAGACAGT GCAGGGCTTC ATGGTGGCTG AAGCTCAGAT CCTGCAGGAG 
    GAGACCATCT TGCCGGTGTA TGTTGTCCCT GAGGATGAGC AGCTTCTCTG TATGTATGAA 
    GAAGTCAATC AGGCTGTGGC ATCCAAGTCT GCTTCTGTGC TGGTGAGAGT TCTCCGTAGT 
    ATGATCACAT CCACTGCCTT CCAAATATTA GTGAGCAATA ATTCCCCCAT CAAGCCCATT 
    ACTGACACCA GCATCATTAC TTTAGAGGGA GTACTTCCTG GAGCTGGAGA AGACCCACCC 
    ACTATTGTAA TTACAGCCCA TTTTGACACG TTCGGTCTTG CTCCTTGGCT GGCGTATGGT 
    GCAGACTCTA ATGGCAGCGG TGTCGCTATT CTTCTCGAGT TGGTTCGACT CTTTCATCGT 
    CTCAACAGTA ATCCACGAAG CCAGGCTCCA TACCATCTTT TATTCTCCTT GACTGGTGGT 
    GGGAAATATA ACTTTCTTGG GACTAAGCAT TGGTTGGAGG AAAACATGGA CCATGCAGAA 
    TCCAGTCTTT TGCATGACAA TGTGGAGTTT GTTATCTGTC TTGACTCTCT TGGCACGGGG 
    GATGAGATTT TCCTGCATGT TTCGCGGCCA CCTAAGCCTG GCACGCCTCA GTACAGCTTT 
    ATTCAGCAAC TGGAGCAGAT AATCTCTGCC AGGTTCCCCT GGGTAAGATT TGGAACGGTT 
    CATAAGAAGA TCAACTTGCA GGAGACCAAT GTGGCTTGGG AGCATGAGCG TTATGGCATG 
    AAACGTATCC CAGGATTCAC TCTGTCACAC ATCGAGAACC CTAAATCAGA GCTTAGAGGA 
    TCTATCCTTG ACACCATTGC ACAAGTGGAC ATGAGGAAAC TCAAGCGGAA CACAGTTATT 
    GTTGCTGAGT CCTTGGCAAG ATTCATGTAC AATCTTTCAG ACAAGGGCTC TGCTAAGGAC 
    ATGCAGGTTT TCAAGGGCAG TTTGGATATT CAAGACAGCC GTTTGTCTGC ACTGATGACC 
    ATGTTGACGT CAGTTCCCCG AGCTGTTCAA CTTCTAGACA GAGAACCAGA ACACACACTC 
    TTGATCAACA GCCTGGAGCA GGAGTTCAAA CATTATCTAA AGCAGGTCCA CAAACACACG 
    TTTCACCAGG ACCGAAGAGA CCCTGAAATC ACTTTCTTCG ATCAAATGAA GCAACCAATG 
    ATGATGTACA GGGTGAAGCC TGCTGCCTTT GACCTATTTT TGGGTGGTTG TATTGCTGGA 
    TACCTTGGAA TAGTTTATTA TGGAATCCAG AACTTTGGGA ACGTCTACAC GAAACTGAAA 
    GCATCCATGA AAGCCAAGCA CCAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009293490.1
    CDS36..1862
    Translation

    Target ORF information:

    RefSeq Version XM_009295215.2
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio zgc:109965 (zgc:109965), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_009295215.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGTGCGAA AGGCTTACCT GCGGCCCTCT TTAAGCCTCG TTCCGGCCAT GCTTTGGACA 
    TCACATCCTA TTCAGAGCAG AAGACGGAGC GTTTTGCACA CGAGGACCAT CTATCGTGGA 
    GTTTGGATGT GTTGTTGGTT AGTGTGTTGG ACTCAGATGT GTGTTGCGAA GATGACTGTG 
    AGAAGCTCGT CAGTGGCGGC GCTGCTGCTG CTCTCAGTGC ATCTCCTGCA TGCGTCTGCT 
    CTTCCTGCTG CGTCTTCATA TGAGTTCAAC GCCTACAGGA TGCAGCACTA CAACCTACAT 
    CAACACAAAC ATGGCTGTCG TGGCGCTATT GTGGTGGCGG AGGCAAGATC GGCAGCAGAC 
    ACGAGTTTGA CCCGCCGCTG TGTGATCATG AAGCTACTCG ATTTTTCCAC AGAGAGATTC 
    CTGGAGGCCA AAAAACAGAA CGCAGCAGCA GTTTTGATCC TGCTACCTCA AAATCTCTCG 
    TCTGTACAAG AGGAGACAGT GCAGGGCTTC ATGGTGGCTG AAGCTCAGAT CCTGCAGGAG 
    GAGACCATCT TGCCGGTGTA TGTTGTCCCT GAGGATGAGC AGCTTCTCTG TATGTATGAA 
    GAAGTCAATC AGGCTGTGGC ATCCAAGTCT GCTTCTGTGC TGGTGAGAGT TCTCCGTAGT 
    ATGATCACAT CCACTGCCTT CCAAATATTA GTGAGCAATA ATTCCCCCAT CAAGCCCATT 
    ACTGACACCA GCATCATTAC TTTAGAGGGA GTACTTCCTG GAGCTGGAGA AGACCCACCC 
    ACTATTGTAA TTACAGCCCA TTTTGACACG TTCGGTCTTG CTCCTTGGCT GGCGTATGGT 
    GCAGACTCTA ATGGCAGCGG TGTCGCTATT CTTCTCGAGT TGGTTCGACT CTTTCATCGT 
    CTCAACAGTA ATCCACGAAG CCAGGCTCCA TACCATCTTT TATTCTCCTT GACTGGTGGT 
    GGGAAATATA ACTTTCTTGG GACTAAGCAT TGGTTGGAGG AAAACATGGA CCATGCAGAA 
    TCCAGTCTTT TGCATGACAA TGTGGAGTTT GTTATCTGTC TTGACTCTCT TGGCACGGGG 
    GATGAGATTT TCCTGCATGT TTCGCGGCCA CCTAAGCCTG GCACGCCTCA GTACAGCTTT 
    ATTCAGCAAC TGGAGCAGAT AATCTCTGCC AGGTTCCCCT GGGTAAGATT TGGAACGGTT 
    CATAAGAAGA TCAACTTGCA GGAGACCAAT GTGGCTTGGG AGCATGAGCG TTATGGCATG 
    AAACGTATCC CAGGATTCAC TCTGTCACAC ATCGAGAACC CTAAATCAGA GCTTAGAGGA 
    TCTATCCTTG ACACCATTGC ACAAGTGGAC ATGAGGAAAC TCAAGCGGAA CACAGTTATT 
    GTTGCTGAGT CCTTGGCAAG ATTCATGTAC AATCTTTCAG ACAAGGGCTC TGCTAAGGAC 
    ATGCAGGTTT TCAAGGGCAG TTTGGATATT CAAGACAGCC GTTTGTCTGC ACTGATGACC 
    ATGTTGACGT CAGTTCCCCG AGCTGTTCAA CTTCTAGACA GAGAACCAGA ACACACACTC 
    TTGATCAACA GCCTGGAGCA GGAGTTCAAA CATTATCTAA AGCAGGTCCA CAAACACACG 
    TTTCACCAGG ACCGAAGAGA CCCTGAAATC ACTTTCTTCG ATCAAATGAA GCAACCAATG 
    ATGATGTACA GGGTGAAGCC TGCTGCCTTT GACCTATTTT TGGGTGGTTG TATTGCTGGA 
    TACCTTGGAA TAGTTTATTA TGGAATCCAG AACTTTGGGA ACGTCTACAC GAAACTGAAA 
    GCATCCATGA AAGCCAAGCA CCAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    RFX transcription factors are essential for hearing in mice.
    Nature communications68549(2015 Oct)
    Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


    Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
    Briefings in bioinformatics12(5)449-62(2011 Sep)
    Gaudet P,Livstone MS,Lewis SE,Thomas PD


    Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
    Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,


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