stn1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	stn1
Entrez Gene ID	393360
Full Name	STN1, CST complex subunit
Synonyms	obfc1,zgc:64174
General protein information	Preferred Names STN1, CST complex subunit Names CST complex subunit STN1 oligonucleotide/oligosaccharide-binding fold containing 1 oligonucleotide/oligosaccharide-binding fold-containing protein 1 suppressor of cdc thirteen homolog
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200389.1	NP_956683.1	CST complex subunit STN1

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	OBFC1	XP_005637747.1
Mus musculus (house mouse)	Obfc1	NP_780569.1
Pan troglodytes (chimpanzee)	OBFC1	XP_508016.2
Homo sapiens (human)	OBFC1	NP_079204.2
Bos taurus (cattle)	OBFC1	NP_001070317.1
	OBFC1	XP_001114080.1
Gallus gallus (chicken)	OBFC1	XP_421742.3
Rattus norvegicus (Norway rat)	Obfc1	NP_001011943.1
Danio rerio (zebrafish)	obfc1	NP_956683.1
Xenopus tropicalis (tropical clawed frog)	obfc1	NP_001004908.1

Gene Ontology
Bibliography

Related articles in PubMed

Mutations in STN1 cause Coats plus syndrome and are associated with genomic and telomere defects.
Simon AJ, Lev A, Zhang Y, Weiss B, Rylova A, Eyal E, Kol N, Barel O, Cesarkas K, Soudack M, Greenberg-Kushnir N, Rhodes M, Wiest DL, Schiby G, Barshack I, Katz S, Pras E, Poran H, Reznik-Wolf H, Ribakovsky E, Simon C, Hazou W, Sidi Y, Lahad A, Katzir H, Sagie S, Aqeilan HA, Glousker G, Amariglio N, Tzfati Y, Selig S, Rechavi G, Somech R
The Journal of experimental medicine213(8)1429-40(2016 Jul)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following stn1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the stn1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa01994	NM_200389.1 Latest version!	Danio rerio STN1 subunit of CST complex (stn1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

stn1 ( NM_200389.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956683.1 Danio rerio STN1 subunit of CST complex (stn1), mRNA.

Price & Availability↑

CloneID	ODa01994
Clone ID Related Accession (Same CDS sequence)	NM_200389.1
Accession Version	NM_200389.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	CST complex subunit STN1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053298.1. ##Evidence-Data-START## Transcript exon combination :: BC053298.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGGTGA GTCTGGGAGA TGATGATGCG GATGAGCTGC CGTCTATGTT GTGGGGTCTG 
GACCCCGTGT TTTCTTCCTA TTGCAGACTC TACATCACTG ATATCCTACT GATGAAAGAG 
TCCAGACAAG TACCCGGGAT TTATTTCTAC AAGACTCACC CCATCTTCCA GGTGGATGTA 
CTGGGGATTG TTGTTTATAA GCGGGAGAGA GAGGATTTCT ACTGCTATGG AGTGGATGAC 
AGTACTGGGG TCATTAATTG TCTTTGTTGG AAAGATGAGA AATGGCGGGA TCAAGGAGGT 
TCAACAACAT GTGGAGATGC TAGCGGATTC CCCAGGAGCT TTAACATTGA GGATGAACTC 
AAAGGGCTGA AAGAGGCTGA ACTTAAGAGC ACCGTGCTGG AGATCGGAGA CCTGCTGAGG 
GTGCGAGGGA CTGTCAAAAC CTCCAGAGAT AACAGGGAAA TCAAGGCCAC CTCCTTCTAT 
AAAGTACATG ACCCTGCGAT GGCAGTGCAG ATCTCACGTA TGCTGGAACT GCCTCAGCTG 
TACAGAAAGT GCTACGATCA GCCGTTCAAG ATGCCGAGTG ATGACCTGGG CTGCACAGAA 
GCAGGTGGTT CCTCACATCC CCAGTATCTG CTGTCTCGGG CAGTTCTCAC CCTTAAGGAG 
TTCCTCTTGG AGAAAGAGGT GACCAGGTTT CGTCCTTATG ATGTTGAGTT CCTCTTACAT 
CCACTGATCC AGAGATCTTC AGCAGAACAG GAGGCAGATC AGCCCGGGAC ATCATTTGCC 
ACACAAGTTG GAAAACTTCT AAAAGAAACC CTGAGTTTCC TCCAGGACGA AGGACAAATA 
TTTCGCAAAA AGCGCACCCA GGATGAAGTC TACAACGTAA CAGAACAAGA CAAAGATCTT 
CATATAGCGA TCAAGGATGT TTTACGAGAG GATACCAAAC GGGAAAAATA TGCAGAGAAA 
GGATGCCATG TCCTTCATAT ACTGTCCAGC GTGAGGCAGC GCTACAGCCA GAATCTGAGT 
CGAGAGGTGC TGGAGGTTGC CCTGACTTTC TTAGAAAGCA ACAGTGATAT TATAAGCACA 
ACAGAAGCGC ACTACATTGT TCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956683.1
CDS	142..1248
Translation	MAVSLGDDDADELPSMLWGLDPVFSSYCRLYITDILLMKESRQVPGIYFYKTHPIFQVDVLGIVVYKREREDFYCYGVDDSTGVINCLCWKDEKWRDQGGSTTCGDASGFPRSFNIEDELKGLKEAELKSTVLEIGDLLRVRGTVKTSRDNREIKATSFYKVHDPAMAVQISRMLELPQLYRKCYDQPFKMPSDDLGCTEAGGSSHPQYLLSRAVLTLKEFLLEKEVTRFRPYDVEFLLHPLIQRSSAEQEADQPGTSFATQVGKLLKETLSFLQDEGQIFRKKRTQDEVYNVTEQDKDLHIAIKDVLREDTKREKYAEKGCHVLHILSSVRQRYSQNLSREVLEVALTFLESNSDIISTTEAHYIVL

Target ORF information:

RefSeq Version	NM_200389.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio STN1 subunit of CST complex (stn1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200389.1

ORF Insert Sequence:

ATGGCGGTGA GTCTGGGAGA TGATGATGCG GATGAGCTGC CGTCTATGTT GTGGGGTCTG 
GACCCCGTGT TTTCTTCCTA TTGCAGACTC TACATCACTG ATATCCTACT GATGAAAGAG 
TCCAGACAAG TACCCGGGAT TTATTTCTAC AAGACTCACC CCATCTTCCA GGTGGATGTA 
CTGGGGATTG TTGTTTATAA GCGGGAGAGA GAGGATTTCT ACTGCTATGG AGTGGATGAC 
AGTACTGGGG TCATTAATTG TCTTTGTTGG AAAGATGAGA AATGGCGGGA TCAAGGAGGT 
TCAACAACAT GTGGAGATGC TAGCGGATTC CCCAGGAGCT TTAACATTGA GGATGAACTC 
AAAGGGCTGA AAGAGGCTGA ACTTAAGAGC ACCGTGCTGG AGATCGGAGA CCTGCTGAGG 
GTGCGAGGGA CTGTCAAAAC CTCCAGAGAT AACAGGGAAA TCAAGGCCAC CTCCTTCTAT 
AAAGTACATG ACCCTGCGAT GGCAGTGCAG ATCTCACGTA TGCTGGAACT GCCTCAGCTG 
TACAGAAAGT GCTACGATCA GCCGTTCAAG ATGCCGAGTG ATGACCTGGG CTGCACAGAA 
GCAGGTGGTT CCTCACATCC CCAGTATCTG CTGTCTCGGG CAGTTCTCAC CCTTAAGGAG 
TTCCTCTTGG AGAAAGAGGT GACCAGGTTT CGTCCTTATG ATGTTGAGTT CCTCTTACAT 
CCACTGATCC AGAGATCTTC AGCAGAACAG GAGGCAGATC AGCCCGGGAC ATCATTTGCC 
ACACAAGTTG GAAAACTTCT AAAAGAAACC CTGAGTTTCC TCCAGGACGA AGGACAAATA 
TTTCGCAAAA AGCGCACCCA GGATGAAGTC TACAACGTAA CAGAACAAGA CAAAGATCTT 
CATATAGCGA TCAAGGATGT TTTACGAGAG GATACCAAAC GGGAAAAATA TGCAGAGAAA 
GGATGCCATG TCCTTCATAT ACTGTCCAGC GTGAGGCAGC GCTACAGCCA GAATCTGAGT 
CGAGAGGTGC TGGAGGTTGC CCTGACTTTC TTAGAAAGCA ACAGTGATAT TATAAGCACA 
ACAGAAGCGC ACTACATTGT TCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Mutations in STN1 cause Coats plus syndrome and are associated with genomic and telomere defects.
The Journal of experimental medicine213(8)1429-40(2016 Jul)
Simon AJ,Lev A,Zhang Y,Weiss B,Rylova A,Eyal E,Kol N,Barel O,Cesarkas K,Soudack M,Greenberg-Kushnir N,Rhodes M,Wiest DL,Schiby G,Barshack I,Katz S,Pras E,Poran H,Reznik-Wolf H,Ribakovsky E,Simon C,Hazou W,Sidi Y,Lahad A,Katzir H,Sagie S,Aqeilan HA,Glousker G,Amariglio N,Tzfati Y,Selig S,Rechavi G,Somech R

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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stn1 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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