ftsj3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ftsj3
Entrez Gene ID	321247
Full Name	FtsJ RNA methyltransferase homolog 3
Synonyms	cb410,ftsj,sb:cb410,wu:fa08a09
General protein information	Preferred Names FtsJ RNA methyltransferase homolog 3 Names pre-rRNA processing protein FTSJ3 FtsJ homolog 3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001305468.1	NP_001292397.1	pre-rRNA processing protein FTSJ3

Pathways from BioSystems

Homologies

Homo sapiens (human)	FTSJ3	NP_060117.3
Canis lupus familiaris (dog)	FTSJ3	XP_005624307.1
Rattus norvegicus (Norway rat)	Ftsj3	NP_001012014.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003002	XP_311882.5
Xenopus tropicalis (tropical clawed frog)	ftsj3	NP_001072428.1
Gallus gallus (chicken)	FTSJ3	NP_001026096.1
Drosophila melanogaster (fruit fly)	CG8939	NP_573099.1
Pan troglodytes (chimpanzee)	FTSJ3	XP_003315725.1
Bos taurus (cattle)	FTSJ3	NP_001068830.1
Mus musculus (house mouse)	Ftsj3	NP_079586.1
Danio rerio (zebrafish)	ftsj	XP_002666179.1
	FTSJ3	XP_001116413.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis.
Recher G, Jouralet J, Brombin A, Heuz? A, Mugniery E, Hermel JM, Desnoulez S, Savy T, Herbomel P, Bourrat F, Peyri?ras N, Jamen F, Joly JS
Development (Cambridge, England)140(24)4860-9(2013 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ftsj3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ftsj3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa26354	NM_001305468.1 Latest version!	Danio rerio FtsJ RNA 2'-O-methyltransferase 3 (ftsj3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ftsj3 ( NM_001305468.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001292397.1 Danio rerio FtsJ RNA 2'-O-methyltransferase 3 (ftsj3), mRNA.

Price & Availability↑

CloneID	ODa26354
Clone ID Related Accession (Same CDS sequence)	NM_001305468.1
Accession Version	NM_001305468.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2517bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	pre-rRNA processing protein FTSJ3
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU498832.4, CT583766.2, EB793829.1 and CT635598.2. On Mar 18, 2015 this sequence version replaced XM_002666133.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQQ01001353.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGGTAAAA AACTGAAAGT CGGAAAAACC CGAAAGGACA AATTCTACCA TCTCGCCAAA 
GAAACGGGTT ATCGCTCCCG GTCGTCATTT AAACTCATCC AGCTCAATCG GAAGTTCCAG 
TTTCTCCAGA AAGCTCGAGC TCTGGTGGAT CTGTGCGCCG CTCCCGGAGG ATGGCTCCAG 
GTGGCCTCTA AGTTCATGCC GGTGTCCAGT CTCGTCATAG GAGTGGATCT GGTGCCCATT 
AAACCCATCC CGAATGTGGT CACTCTTCAG GAGGACATCA CCACTGAGAA ATGCAGACAG 
GCTCTGAGAA AGGAGCTGCA GACGTGGAAG GTGGACGTGG TTCTCAATGA CGGTGCGCCG 
AATGTTGGTG CAAACTGGCA ACACGATGCT TTCTCTCAAG CCAACCTGAC GCTGATGGCT 
CTGAAGCTGG CCTGCGAGTT CCTGGCGAAG GGCGGCACGT TTATCACCAA AGTTTTCCGC 
TCCAAAGATT ACCAGCCGCT CATGTGGATC TTCCAGCAGT TCTTCAAGAA AGTCCAAGCC 
ACCAAACCTC AGGCCTCCAG GAACGAGTCC GCTGAGATCT TCGTCGTCTG CCAAGGTTTT 
TTGGCGCCGG ATAAAATTGA CAACAAATTC TTCGACCCCA AACATGCCTT TAAAGAGGTG 
GATGTGCAAG TGAAGACCGT CAAAGAGCTG GTTAACAAGA AGAAGCCCAA GGCTGAAGGC 
TACAGTGATG GCGATCTCAC TCTCTACCAC AAGTTCACCA TCACTGAATT CCTGAAGGCG 
GAAAACCCTG TGGATTTCCT GAGCAAAGCC AACGAAATCA CGTTTGATGA CCCGCTGCTG 
GAGTCTCACC CCCTGACGTC CGCTGAGATC AGAGAGTGCT GCTCAGATGT GAAAGTTCTG 
GGGCGTAAGG AGCTGCGTCT GCTGTTGTCA TGGAGATCCA AGCTGAGGAA GTTCCTAGCG 
AAAAAGCTGC GACAGGAAGC CAAACAACTC GATCAGGAAG CGAGCTCGGA TGATGAGCAG 
AGTGACACCG ATGAGAAGGA GAGCAAGAAG AAGAAGTCAG AAGAGAAGAA AGAGGAGGAA 
GATGAAGACG AGGCGATGGA GAAAAAGCTG ACAGAGCTGA AAGCAGAAGA GTTTGCTGAG 
CTCAAACGGA AGAAGAAGAA GCTGCTGAAG GAGCGTCGTA AGCAGCGGGA GCGTGTGGAG 
CTGAAGATGG ATCTTCCAGG AGTGTCGATC GCAGACGCTG GCGATTCCTC CATGTTCAGC 
CTCGGCAGCA TCAGGAAGAG CCAGGGTCTG CATCAGCTGG CTCAGGGTGA TATGTCTGCA 
GCAGACGCTC TGCTGGAGGA TGACGAGCAG GAGGATGTTC ATCTGTCTGA TGAAGAGCAG 
GAGGACGAGC GCATGTCTCT GGCCTCAGAC CTGGACTCTG ATGACCTGCA GGAGATCCAG 
CAGAAGGAGG AGCAGATGCT CAAAAACAAG CCCAAGAAGA AGAAGAAAGT GTCGTTTGAG 
CAGCAGGATG ATGGTGACGA GGACAATAAA AACGAATTGC TTGTCGAGCT TGAAGGAAAA 
GACGAGAGGA AGGAGCGCGA GACCAGCATG TGGTTCAGCA AGGATATCTT CGCTGAGCTC 
GATCTGAACG ACGACACCGA CGCCATGAAC GAACTCAAGC AAACGCAGAT CCTGCAGACC 
GGAAGAGGTA AAAAGAGGAA GGCACAGCAG GAGGAAGAGG CGGAGCCTAA GAAACCGGAA 
CAGAAAGTGG CCACTCCCTC ACAGGAAGTG AAGGAGGCTG AAGACAGCGA CTCTGATGAC 
AGCAGCGATG ATGAGAGGGA GATTGCGCAA ATGAAACAAG CGTCAGCGGC CGTCGGTACG 
AATGGAGCTG AAGAAAACGA CAACATCCAA GTTATTCCAG TTGAAAAAAC AAATAAGCGC 
GCTCGTGTTC TGGATGCTGA AGGTTTGGCT CTCGGTGCTC AGATCGCCAC GTCCAAAAAA 
AGAGAGCGAG ACCTGATTGA CGGCTCCTTC CACAGGTTTG CCAACTCTGA GGACATGACC 
GAGGTTCCGG CCTGGTTTGT GGACGATGAG AAGAAGCACC GAAAACGGCC GGTTCCTGTG 
ACCAAAGACA TGGTGGAGGA ATACAAGCAG AAGTGGAAAG AAATCAACGC TCGGCCAATC 
AGACGCGTGG CGGAGGCTAA AGCCCGCAAG AAGAGACGGA CGCTGAAGAA GATGGAGCAG 
GCCAAGAAGA AAGCTGAAGC TGTGGTGAAT ACAGTGGACA TTTCAGAGCG AGAGAAGATG 
GCTCAGCTTA AGAGTATCTA CAAGAAGGCC GGCGTGGGGA AGGAGAAGCG TGAAGTGACG 
TATGTTGTGG CCAAGAAGGG CGTCGGCCGC AGAGTTCGCC GTCCAGCAGG AGTGAAAGGA 
GCCTTTAAGG TCGTCGACGG GCGGATGAAG AAAGACACAA GAGCTGCGCA GAGGAAAGAT 
GAAAGGGGGC GGGGCAAAGG AGGGCGAGGT TCAAAAGGTG GGTGCGGTTC TAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001292397.1
CDS	161..2677
Translation	MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQANLTLMALKLACEFLAKGGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQASRNESAEIFVVCQGFLAPDKIDNKFFDPKHAFKEVDVQVKTVKELVNKKKPKAEGYSDGDLTLYHKFTITEFLKAENPVDFLSKANEITFDDPLLESHPLTSAEIRECCSDVKVLGRKELRLLLSWRSKLRKFLAKKLRQEAKQLDQEASSDDEQSDTDEKESKKKKSEEKKEEEDEDEAMEKKLTELKAEEFAELKRKKKKLLKERRKQRERVELKMDLPGVSIADAGDSSMFSLGSIRKSQGLHQLAQGDMSAADALLEDDEQEDVHLSDEEQEDERMSLASDLDSDDLQEIQQKEEQMLKNKPKKKKKVSFEQQDDGDEDNKNELLVELEGKDERKERETSMWFSKDIFAELDLNDDTDAMNELKQTQILQTGRGKKRKAQQEEEAEPKKPEQKVATPSQEVKEAEDSDSDDSSDDEREIAQMKQASAAVGTNGAEENDNIQVIPVEKTNKRARVLDAEGLALGAQIATSKKRERDLIDGSFHRFANSEDMTEVPAWFVDDEKKHRKRPVPVTKDMVEEYKQKWKEINARPIRRVAEAKARKKRRTLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGVGKEKREVTYVVAKKGVGRRVRRPAGVKGAFKVVDGRMKKDTRAAQRKDERGRGKGGRGSKGGCGSK

Target ORF information:

RefSeq Version	NM_001305468.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio FtsJ RNA 2'-O-methyltransferase 3 (ftsj3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001305468.1

ORF Insert Sequence:

ATGGGTAAAA AACTGAAAGT CGGAAAAACC CGAAAGGACA AATTCTACCA TCTCGCCAAA 
GAAACGGGTT ATCGCTCCCG GTCGTCATTT AAACTCATCC AGCTCAATCG GAAGTTCCAG 
TTTCTCCAGA AAGCTCGAGC TCTGGTGGAT CTGTGCGCCG CTCCCGGAGG ATGGCTCCAG 
GTGGCCTCTA AGTTCATGCC GGTGTCCAGT CTCGTCATAG GAGTGGATCT GGTGCCCATT 
AAACCCATCC CGAATGTGGT CACTCTTCAG GAGGACATCA CCACTGAGAA ATGCAGACAG 
GCTCTGAGAA AGGAGCTGCA GACGTGGAAG GTGGACGTGG TTCTCAATGA CGGTGCGCCG 
AATGTTGGTG CAAACTGGCA ACACGATGCT TTCTCTCAAG CCAACCTGAC GCTGATGGCT 
CTGAAGCTGG CCTGCGAGTT CCTGGCGAAG GGCGGCACGT TTATCACCAA AGTTTTCCGC 
TCCAAAGATT ACCAGCCGCT CATGTGGATC TTCCAGCAGT TCTTCAAGAA AGTCCAAGCC 
ACCAAACCTC AGGCCTCCAG GAACGAGTCC GCTGAGATCT TCGTCGTCTG CCAAGGTTTT 
TTGGCGCCGG ATAAAATTGA CAACAAATTC TTCGACCCCA AACATGCCTT TAAAGAGGTG 
GATGTGCAAG TGAAGACCGT CAAAGAGCTG GTTAACAAGA AGAAGCCCAA GGCTGAAGGC 
TACAGTGATG GCGATCTCAC TCTCTACCAC AAGTTCACCA TCACTGAATT CCTGAAGGCG 
GAAAACCCTG TGGATTTCCT GAGCAAAGCC AACGAAATCA CGTTTGATGA CCCGCTGCTG 
GAGTCTCACC CCCTGACGTC CGCTGAGATC AGAGAGTGCT GCTCAGATGT GAAAGTTCTG 
GGGCGTAAGG AGCTGCGTCT GCTGTTGTCA TGGAGATCCA AGCTGAGGAA GTTCCTAGCG 
AAAAAGCTGC GACAGGAAGC CAAACAACTC GATCAGGAAG CGAGCTCGGA TGATGAGCAG 
AGTGACACCG ATGAGAAGGA GAGCAAGAAG AAGAAGTCAG AAGAGAAGAA AGAGGAGGAA 
GATGAAGACG AGGCGATGGA GAAAAAGCTG ACAGAGCTGA AAGCAGAAGA GTTTGCTGAG 
CTCAAACGGA AGAAGAAGAA GCTGCTGAAG GAGCGTCGTA AGCAGCGGGA GCGTGTGGAG 
CTGAAGATGG ATCTTCCAGG AGTGTCGATC GCAGACGCTG GCGATTCCTC CATGTTCAGC 
CTCGGCAGCA TCAGGAAGAG CCAGGGTCTG CATCAGCTGG CTCAGGGTGA TATGTCTGCA 
GCAGACGCTC TGCTGGAGGA TGACGAGCAG GAGGATGTTC ATCTGTCTGA TGAAGAGCAG 
GAGGACGAGC GCATGTCTCT GGCCTCAGAC CTGGACTCTG ATGACCTGCA GGAGATCCAG 
CAGAAGGAGG AGCAGATGCT CAAAAACAAG CCCAAGAAGA AGAAGAAAGT GTCGTTTGAG 
CAGCAGGATG ATGGTGACGA GGACAATAAA AACGAATTGC TTGTCGAGCT TGAAGGAAAA 
GACGAGAGGA AGGAGCGCGA GACCAGCATG TGGTTCAGCA AGGATATCTT CGCTGAGCTC 
GATCTGAACG ACGACACCGA CGCCATGAAC GAACTCAAGC AAACGCAGAT CCTGCAGACC 
GGAAGAGGTA AAAAGAGGAA GGCACAGCAG GAGGAAGAGG CGGAGCCTAA GAAACCGGAA 
CAGAAAGTGG CCACTCCCTC ACAGGAAGTG AAGGAGGCTG AAGACAGCGA CTCTGATGAC 
AGCAGCGATG ATGAGAGGGA GATTGCGCAA ATGAAACAAG CGTCAGCGGC CGTCGGTACG 
AATGGAGCTG AAGAAAACGA CAACATCCAA GTTATTCCAG TTGAAAAAAC AAATAAGCGC 
GCTCGTGTTC TGGATGCTGA AGGTTTGGCT CTCGGTGCTC AGATCGCCAC GTCCAAAAAA 
AGAGAGCGAG ACCTGATTGA CGGCTCCTTC CACAGGTTTG CCAACTCTGA GGACATGACC 
GAGGTTCCGG CCTGGTTTGT GGACGATGAG AAGAAGCACC GAAAACGGCC GGTTCCTGTG 
ACCAAAGACA TGGTGGAGGA ATACAAGCAG AAGTGGAAAG AAATCAACGC TCGGCCAATC 
AGACGCGTGG CGGAGGCTAA AGCCCGCAAG AAGAGACGGA CGCTGAAGAA GATGGAGCAG 
GCCAAGAAGA AAGCTGAAGC TGTGGTGAAT ACAGTGGACA TTTCAGAGCG AGAGAAGATG 
GCTCAGCTTA AGAGTATCTA CAAGAAGGCC GGCGTGGGGA AGGAGAAGCG TGAAGTGACG 
TATGTTGTGG CCAAGAAGGG CGTCGGCCGC AGAGTTCGCC GTCCAGCAGG AGTGAAAGGA 
GCCTTTAAGG TCGTCGACGG GCGGATGAAG AAAGACACAA GAGCTGCGCA GAGGAAAGAT 
GAAAGGGGGC GGGGCAAAGG AGGGCGAGGT TCAAAAGGTG GGTGCGGTTC TAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis.
Development (Cambridge, England)140(24)4860-9(2013 Dec)
Recher G,Jouralet J,Brombin A,Heuz? A,Mugniery E,Hermel JM,Desnoulez S,Savy T,Herbomel P,Bourrat F,Peyri?ras N,Jamen F,Joly JS

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ftsj3 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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