| Gene Symbol | LOC100535278 |
| Entrez Gene ID | 100535278 |
| Full Name | collagen alpha-6(VI) chain |
| Gene Type | protein-coding |
| Organism | Danio rerio(Zebrafish) |
The following LOC100535278 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100535278 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa148657 | |
| Clone ID Related Accession (Same CDS sequence) | XM_009307580.3 | |
| Accession Version | XM_009307580.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 8325bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-14 | |
| Organism | Danio rerio(zebrafish) | |
| Product | collagen alpha-6(VI) chain | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) and transcript sequences (GDQH01003119.1 and GFIL01024891.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009307580.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 399 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## | |
1 | ATGCAGAGAA CAAGGAACTC AAGCATGGGG AAGGAGTGGG GATTCCTTGG GATCCTTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_009305855.3 |
| CDS | 226..8550 |
| Translation |
Target ORF information:
Target ORF information:
|
 XM_009307580.3 |
1 | ATGCAGAGAA CAAGGAACTC AAGCATGGGG AAGGAGTGGG GATTCCTTGG GATCCTTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ODa54778 | |
| Clone ID Related Accession (Same CDS sequence) | XM_009307580.2 | |
| Accession Version | XM_009307580.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 8301bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-23 | |
| Organism | Danio rerio(Zebrafish) | |
| Product | collagen alpha-6(VI) chain | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) and transcript sequence (GDQH01003119.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009307580.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases assembly gap :: added 285 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## | |
1 | ATGGGGAAGG AGTGGGGATT CCTTGGGATC CTTGTTCTGT CATTATGCTT TCTTGACAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_009305855.2 |
| CDS | 128..8428 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_009307580.2 |
1 | ATGGGGAAGG AGTGGGGATT CCTTGGGATC CTTGTTCTGT CATTATGCTT TCTTGACAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
