Gene Symbol | LOC100534909 |
Entrez Gene ID | 100534909 |
Full Name | transcription factor HES-5 |
Synonyms | Her15,hes5 |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » LOC100534909 cDNA ORF clone
Gene Symbol | LOC100534909 |
Entrez Gene ID | 100534909 |
Full Name | transcription factor HES-5 |
Synonyms | Her15,hes5 |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001366790.1 | NP_001353719.1 | hairy and enhancer of split-related 15, tandem duplicate 1 |
XM_003199526.5 | XP_003199574.1 | transcription factor HES-5 |
XM_003199526.4 | XP_003199574.1 | transcription factor HES-5-like |
Danio rerio (zebrafish) | her15.1 | NP_878295.1 |
Gallus gallus (chicken) | LOC419390 | NP_001264810.1 |
Danio rerio (zebrafish) | LOC100534909 | XP_003199574.1 |
Xenopus tropicalis (tropical clawed frog) | hes5.2 | NP_001037974.1 |
Danio rerio (zebrafish) | her12 | NP_991182.1 |
Completing the set of h/E(spl) cyclic genes in zebrafish: her12 and her15 reveal novel modes of expression and contribute to the segmentation clock.
Shankaran SS, Sieger D, Schr?ter C, Czepe C, Pauly MC, Laplante MA, Becker TS, Oates AC, Gajewski M
Developmental biology304(2)615-32(2007 Apr)
her11 is involved in the somitogenesis clock in zebrafish.
Sieger D, Tautz D, Gajewski M
Development genes and evolution214(8)393-406(2004 Aug)
Notch activity induces Nodal expression and mediates the establishment of left-right asymmetry in vertebrate embryos.
Raya A, Kawakami Y, Rodriguez-Esteban C, Buscher D, Koth CM, Itoh T, Morita M, Raya RM, Dubova I, Bessa JG, de la Pompa JL, Izpisua Belmonte JC
Genes & development17(10)1213-8(2003 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100534909 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100534909 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa17363 | |
Clone ID Related Accession (Same CDS sequence) | NM_001366790.1 , XM_003199526.5 , XM_003199526.4 | |
Accession Version | NM_001366790.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 450bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | hairy and enhancer of split-related 15, tandem duplicate 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL929185.14 and AY576277.1. On Oct 20, 2018 this sequence version replaced XM_003199526.5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EH581494.1, EH591395.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001353719.1 |
CDS | 55..504 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001366790.1 |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17363 | |
Clone ID Related Accession (Same CDS sequence) | NM_001366790.1 , XM_003199526.5 , XM_003199526.4 | |
Accession Version | XM_003199526.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 450bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transcription factor HES-5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_003199526.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003199574.1 |
CDS | 69..518 |
Translation |
Target ORF information:
Target ORF information:
|
XM_003199526.5 |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17363 | |
Clone ID Related Accession (Same CDS sequence) | NM_001366790.1 , XM_003199526.5 , XM_003199526.4 | |
Accession Version | XM_003199526.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 450bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transcription factor HES-5-like | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_003199526.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003199574.1 |
CDS | 63..512 |
Translation |
Target ORF information:
Target ORF information:
|
XM_003199526.4 |
1 | ATGGCTCCTG CGTATATGAC TGAATACTCC AAGCTTTCCA ACAAGGAGAA GCACAAATTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Completing the set of h/E(spl) cyclic genes in zebrafish: her12 and her15 reveal novel modes of expression and contribute to the segmentation clock. |
her11 is involved in the somitogenesis clock in zebrafish. |
Notch activity induces Nodal expression and mediates the establishment of left-right asymmetry in vertebrate embryos. |