Gene Symbol | LOC100331909 |
Entrez Gene ID | 100331909 |
Full Name | D-galactoside-specific lectin-like |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » LOC100331909 cDNA ORF clone
Gene Symbol | LOC100331909 |
Entrez Gene ID | 100331909 |
Full Name | D-galactoside-specific lectin-like |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021469608.1 | XP_021325283.1 | D-galactoside-specific lectin-like |
XM_002666304.5 | XP_002666350.3 | L-rhamnose-binding lectin CSL2-like |
NM_001365958.1 | NP_001352887.1 | D-galactoside-specific lectin-like precursor |
XM_002666304.4 | XP_002666350.2 | D-galactoside-specific lectin-like |
Danio rerio (zebrafish) | zgc:136410 | NP_001035384.1 |
Danio rerio (zebrafish) | LOC564145 | NP_001103581.1 |
Danio rerio (zebrafish) | si:ch211-12h2.6 | NP_001082869.1 |
Danio rerio (zebrafish) | si:ch211-250e5.16 | NP_001093874.1 |
Danio rerio (zebrafish) | si:ch211-226h8.11 | NP_001103856.1 |
Danio rerio (zebrafish) | si:ch211-145c1.1 | XP_692138.4 |
Danio rerio (zebrafish) | si:dkeyp-98a7.3 | XP_003201136.2 |
Danio rerio (zebrafish) | si:ch73-189n23.1 | NP_001103315.1 |
Danio rerio (zebrafish) | LOC100301575 | NP_001153837.1 |
Danio rerio (zebrafish) | LOC100535660 | XP_003201119.2 |
Danio rerio (zebrafish) | si:dkeyp-46h3.8 | XP_003200629.1 |
Danio rerio (zebrafish) | si:ch211-66i15.5 | XP_001922851.2 |
Danio rerio (zebrafish) | LOC561392 | XP_003201121.1 |
Danio rerio (zebrafish) | si:ch211-250e5.9 | XP_005174100.1 |
Danio rerio (zebrafish) | si:ch211-154a22.8 | XP_005174099.1 |
Danio rerio (zebrafish) | si:dkeyp-98a7.10 | NP_001138280.2 |
Danio rerio (zebrafish) | LOC100537146 | XP_003201139.2 |
Danio rerio (zebrafish) | LOC100331909 | XP_002666350.2 |
Danio rerio (zebrafish) | LOC564755 | XP_002663369.3 |
Danio rerio (zebrafish) | si:ch1073-75o15.4 | XP_002663370.1 |
Danio rerio (zebrafish) | LOC100331936 | XP_002667144.3 |
Danio rerio (zebrafish) | si:dkeyp-98a7.4 | NP_001128340.2 |
Danio rerio (zebrafish) | si:dkeyp-98a7.7 | XP_003201138.2 |
Danio rerio (zebrafish) | si:ch211-226h8.4 | NP_001103858.1 |
Danio rerio (zebrafish) | LOC798111 | NP_001153845.1 |
Danio rerio (zebrafish) | si:dkeyp-98a7.5 | NP_001153834.1 |
Danio rerio (zebrafish) | zgc:171717 | NP_001098604.1 |
Danio rerio (zebrafish) | LOC100331830 | XP_002666349.3 |
Danio rerio (zebrafish) | si:dkey-240e12.6 | NP_001082844.1 |
Danio rerio (zebrafish) | si:ch211-226h8.14 | NP_001095862.1 |
Danio rerio (zebrafish) | si:dkey-179j5.5 | XP_005174092.1 |
Danio rerio (zebrafish) | LOC100331690 | XP_002666347.3 |
Danio rerio (zebrafish) | MGC172218 | NP_001103589.1 |
Danio rerio (zebrafish) | LOC100535847 | XP_003201123.1 |
Danio rerio (zebrafish) | zgc:171776 | NP_001103190.1 |
Danio rerio (zebrafish) | si:dkeyp-46h3.2 | XP_005170166.1 |
Danio rerio (zebrafish) | LOC100536038 | XP_003200654.2 |
Danio rerio (zebrafish) | si:dkey-90l23.1 | XP_003199229.2 |
Danio rerio (zebrafish) | zgc:153499 | NP_001038891.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100331909 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100331909 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa27043 | |
Clone ID Related Accession (Same CDS sequence) | XM_021469608.1 , NM_001365958.1 , XM_002666304.4 | |
Accession Version | NM_001365958.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | D-galactoside-specific lectin-like precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL929192.17. On or before Sep 19, 2018 this sequence version replaced XM_021469608.1, XM_002666304.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EH467368.1, EH466753.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708832, SAMEA898399 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352887.1 |
CDS | 25..411 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001365958.1 |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa27043 | |
Clone ID Related Accession (Same CDS sequence) | XM_021469608.1 , NM_001365958.1 , XM_002666304.4 | |
Accession Version | XM_021469608.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | D-galactoside-specific lectin-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021325283.1 |
CDS | 38..424 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021469608.1 |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa27043 | |
Clone ID Related Accession (Same CDS sequence) | XM_021469608.1 , NM_001365958.1 , XM_002666304.4 | |
Accession Version | XM_002666304.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | D-galactoside-specific lectin-like | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_002666304.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002666350.2 |
CDS | 20..406 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002666304.4 |
1 | ATGCTCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATCCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa146180 | |
Clone ID Related Accession (Same CDS sequence) | XM_002666304.5 | |
Accession Version | XM_002666304.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | L-rhamnose-binding lectin CSL2-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018395111.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_002666304.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATTCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002666350.3 |
CDS | 30..416 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002666304.5 |
1 | ATGTGCTCTC TCAGTTTATT GTTTACCTTG GTGTTTCTGA ACTCCATTCT GCTGATATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |