LOC107101643 cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107101643
Entrez Gene ID	107101643
Full Name	inner ear-specific collagen-like
Gene Type	protein-coding
Organism	Cyprinodon variegatus(sheepshead minnow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015400631.1	XP_015256117.1	inner ear-specific collagen-like

Pathways from BioSystems
Gene Ontology

The following LOC107101643 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107101643 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy28354	XM_015400631.1 Latest version!	Cyprinodon variegatus inner ear-specific collagen-like (LOC107101643), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107101643 ( XM_015400631.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015256117.1 Cyprinodon variegatus inner ear-specific collagen-like (LOC107101643), mRNA.

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CloneID	OCy28354
Clone ID Related Accession (Same CDS sequence)	XM_015400631.1
Accession Version	XM_015400631.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1518bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	inner ear-specific collagen-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015151580.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGCCCA ACTCAGAGAG AAAGATGTTG TCCAGCATGC TGGGAGTCCT TGTCTTGTCC 
TCCACCTGTT CAGCCATGCT GCTCCGAAAC CTGACCAGAA ACATGATGCC ACCTGAGGAA 
GGCTCCGGGT TCGACCCCAA CACTTTACGC TGGCCTGAAG AGGGAGAGGA TTCACCTTCA 
GTTCCAGATC CCCAATGGTC AGCTAACGCT CAGCATGTAC GCATGCCGTT TTTGCCCTCC 
GACAACAATA TGACCAACAA CGGCCTACGG ATGTCAGCCA CCAACTCACC TCTGATGCCA 
GAGCCAGATA CTTCAATCTG TGACATCATT TTCAGCCAGC CGGTACCGCC CTCCATCGAC 
CAGATCCCAT TCTTCTGCAT CTGCTCCTAC TGCAAAGGAA CCATGGGGCC CAAAGGAGAC 
CGTGGGGACC GGGGCCTTCC AGGTCAACCT GGAAGTCCTG GAATGAGAGG AATGACAGGA 
TTCAAGGGTT ACCGAGGATT CACGGGCCCC CAGGGAATTA AAGGTCAAAA GGGAGACTTG 
GGAGAGAAAG GGCAGACTGG TCCATCTGGG TTCACTGGAA CGAAAGGCGA GCGGGGATAC 
AAAGGTGAGA AAGGTGACCA AGGACTGGCG GGACCTCCAG GCCTTCAAGG TCCCCAAGGA 
GAAATGGGCA CATGTCCTGC CTCTTGCGAG AGTGTCCCAG GTGCACCAGG TCTGCAGGGG 
CCACCAGGAC CAGCTGGGGC CCGGGGCCTG CCTGGGGTCC AGGGAGTTAT AGGACCTAAA 
GGTGGGAAGG GTGATAAAGG GGATACTGGA GTGCCTGGCA ATCCTGGAGT GAATGGTCAG 
AAAGGTGACC AGGGTGAGCA GGGGATCTGT GAATGCACAG ATGGAACTGA TGGTGCTAAT 
GGGGCGCCAG GAGATAAGGG AAGTAAAGGG GAAAAAGGTG ACCTTGGTCC ACAAGGTATA 
CAGGGTCCTG TGGGTCTGAA AGGAGATCAG GGTGGTATGG GTCTCATGGG GCCACCTGGT 
CCCTGCTCCC CCGCCATCCA ATCAGCATTC TCAGCATGCA TCGACCAATC ATTCCCACCT 
GCAAACTGGC CAGTACCCTT CCCTGAAGTC ATAACAAATG TGCAGAGGCA CTTTGACCCA 
GCCATGGGAA TGTACACAGC ACCGGTAAAT GGCACTTATG TTTTCTCTTT CCACCTGGCA 
ACCAAGGAGA AGCCACTGAA AGTTGGCCTG TTCCGAAATT TCTTTCCTGT GGTGAGAGTA 
ACAGAAGCAT CGAGCCAAGC TACCACCAGC AATACGGTTG TTCTCCATCT GAACATTGGT 
GATAGGTTAT GGCTGCAGGT AAAGGACACC CTTACCAACG GCATGCACAC CGACAGTGAA 
ACCAAAAGCA CATTCTCTGG CTACCTGCTG CACCCAGATT CCTGCGATGC AGCCTTTGGT 
AGAGGCTTTT TCCCAGCACT CCCTGCCCCC ACAAGTGGCT TTAGCTGGGA TGGCCCTGGT 
GGTCCTGCCA CTCCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015256117.1
CDS	92..1609
Translation	MLPNSERKMLSSMLGVLVLSSTCSAMLLRNLTRNMMPPEEGSGFDPNTLRWPEEGEDSPSVPDPQWSANAQHVRMPFLPSDNNMTNNGLRMSATNSPLMPEPDTSICDIIFSQPVPPSIDQIPFFCICSYCKGTMGPKGDRGDRGLPGQPGSPGMRGMTGFKGYRGFTGPQGIKGQKGDLGEKGQTGPSGFTGTKGERGYKGEKGDQGLAGPPGLQGPQGEMGTCPASCESVPGAPGLQGPPGPAGARGLPGVQGVIGPKGGKGDKGDTGVPGNPGVNGQKGDQGEQGICECTDGTDGANGAPGDKGSKGEKGDLGPQGIQGPVGLKGDQGGMGLMGPPGPCSPAIQSAFSACIDQSFPPANWPVPFPEVITNVQRHFDPAMGMYTAPVNGTYVFSFHLATKEKPLKVGLFRNFFPVVRVTEASSQATTSNTVVLHLNIGDRLWLQVKDTLTNGMHTDSETKSTFSGYLLHPDSCDAAFGRGFFPALPAPTSGFSWDGPGGPATP

Target ORF information:

RefSeq Version	XM_015400631.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus inner ear-specific collagen-like (LOC107101643), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015400631.1

ORF Insert Sequence:

ATGCTGCCCA ACTCAGAGAG AAAGATGTTG TCCAGCATGC TGGGAGTCCT TGTCTTGTCC 
TCCACCTGTT CAGCCATGCT GCTCCGAAAC CTGACCAGAA ACATGATGCC ACCTGAGGAA 
GGCTCCGGGT TCGACCCCAA CACTTTACGC TGGCCTGAAG AGGGAGAGGA TTCACCTTCA 
GTTCCAGATC CCCAATGGTC AGCTAACGCT CAGCATGTAC GCATGCCGTT TTTGCCCTCC 
GACAACAATA TGACCAACAA CGGCCTACGG ATGTCAGCCA CCAACTCACC TCTGATGCCA 
GAGCCAGATA CTTCAATCTG TGACATCATT TTCAGCCAGC CGGTACCGCC CTCCATCGAC 
CAGATCCCAT TCTTCTGCAT CTGCTCCTAC TGCAAAGGAA CCATGGGGCC CAAAGGAGAC 
CGTGGGGACC GGGGCCTTCC AGGTCAACCT GGAAGTCCTG GAATGAGAGG AATGACAGGA 
TTCAAGGGTT ACCGAGGATT CACGGGCCCC CAGGGAATTA AAGGTCAAAA GGGAGACTTG 
GGAGAGAAAG GGCAGACTGG TCCATCTGGG TTCACTGGAA CGAAAGGCGA GCGGGGATAC 
AAAGGTGAGA AAGGTGACCA AGGACTGGCG GGACCTCCAG GCCTTCAAGG TCCCCAAGGA 
GAAATGGGCA CATGTCCTGC CTCTTGCGAG AGTGTCCCAG GTGCACCAGG TCTGCAGGGG 
CCACCAGGAC CAGCTGGGGC CCGGGGCCTG CCTGGGGTCC AGGGAGTTAT AGGACCTAAA 
GGTGGGAAGG GTGATAAAGG GGATACTGGA GTGCCTGGCA ATCCTGGAGT GAATGGTCAG 
AAAGGTGACC AGGGTGAGCA GGGGATCTGT GAATGCACAG ATGGAACTGA TGGTGCTAAT 
GGGGCGCCAG GAGATAAGGG AAGTAAAGGG GAAAAAGGTG ACCTTGGTCC ACAAGGTATA 
CAGGGTCCTG TGGGTCTGAA AGGAGATCAG GGTGGTATGG GTCTCATGGG GCCACCTGGT 
CCCTGCTCCC CCGCCATCCA ATCAGCATTC TCAGCATGCA TCGACCAATC ATTCCCACCT 
GCAAACTGGC CAGTACCCTT CCCTGAAGTC ATAACAAATG TGCAGAGGCA CTTTGACCCA 
GCCATGGGAA TGTACACAGC ACCGGTAAAT GGCACTTATG TTTTCTCTTT CCACCTGGCA 
ACCAAGGAGA AGCCACTGAA AGTTGGCCTG TTCCGAAATT TCTTTCCTGT GGTGAGAGTA 
ACAGAAGCAT CGAGCCAAGC TACCACCAGC AATACGGTTG TTCTCCATCT GAACATTGGT 
GATAGGTTAT GGCTGCAGGT AAAGGACACC CTTACCAACG GCATGCACAC CGACAGTGAA 
ACCAAAAGCA CATTCTCTGG CTACCTGCTG CACCCAGATT CCTGCGATGC AGCCTTTGGT 
AGAGGCTTTT TCCCAGCACT CCCTGCCCCC ACAAGTGGCT TTAGCTGGGA TGGCCCTGGT 
GGTCCTGCCA CTCCTTAA