LOC105344940 cDNA ORF clone, Crassostrea gigas(Pacific oyster)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105344940
Entrez Gene ID	105344940
Full Name	interleukin-1 receptor-associated kinase 1-binding protein 1-like
Synonyms	IAKBP1
Gene Type	protein-coding
Organism	Crassostrea gigas(Pacific oyster)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001305344.1	NP_001292273.1	interleukin-1 receptor-associated kinase 1-binding protein 1-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Identification and functional characterization of SIMPL in Crassostrea gigas reveals its ancient origin and involvement in the regulation of Rel/NF-?B transcription activity.
Zhang Y, Li J, Yu F, Tong Y, Zhang Y, Xiang Z, Yu Z
Fish & shellfish immunology40(1)239-44(2014 Sep)

The first homolog of a TRAF7 (TNF receptor-associated factor 7) gene in a mollusk, Crassostrea hongkongensis.
Fu D, Zhang Y, Xiao S, Yu Z
Fish & shellfish immunology31(6)1208-10(2011 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC105344940 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105344940 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr05863	NM_001305344.1 Latest version!	Crassostrea gigas interleukin-1 receptor-associated kinase 1-binding protein 1-like (LOC105344940), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105344940 ( NM_001305344.1 ) cDNA ORF clone, Crassostrea gigas(Pacific oyster) -> NP_001292273.1 Crassostrea gigas interleukin-1 receptor-associated kinase 1-binding protein 1-like (LOC105344940), mRNA.

Price & Availability↑

CloneID	OCr05863
Clone ID Related Accession (Same CDS sequence)	NM_001305344.1
Accession Version	NM_001305344.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 759bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-04
Organism	Crassostrea gigas(Pacific oyster)
Product	interleukin-1 receptor-associated kinase 1-binding protein 1-like
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JN029960.1. On Mar 8, 2015 this sequence version replaced XM_011452856.1. ##Evidence-Data-START## Transcript exon combination :: JN029960.1, HQ144188.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00139189, SAMN00714285 [ECO:0000348] ##Evidence-Data-END##

ATGAGTTTAT TTAAGCCTTC TCATGTATTT GCTAATCTTC CCGACACAGC TTCGGAAATG 
AACAAAATGA ACGCATTTGC GAATGATGAA AACAAAATAA CGGAGGCTAA AATTGACAAC 
CGTGTAATCC AAGTTTCCTC TGTTGGAGTT GTAACACTGC CACCTGACCG ATGTAGGCTG 
ACAATCAGAG TCACATCAAC AAAAGAAAAT GTAGCTGACG TGAAAGAGAG CACGACAAGG 
AGACTAGATT ATATCATTCA GACTCTTCAC AATCACTCGG TTAAGGATTC TGACATACAG 
ATAAGTAAAA GTATGCGTCG GTCAGATTCA ATGTACCAGA TGGATGTAGA AGTGACAGCT 
CTTTTCATTG ACCTCCACAA ATGTCAAAAT GTCTCCAATT TACTGGTAGA GAAACTTGAC 
CCAACAGTGA CAGTGTGCTT ACCAGAATTT TTTCATTCCT CTGTAACTTT ACAGAATCTC 
AGACATCAAG CTAGTCTCCT CGCCATTCAT AATGCCAAAC AGAAAGCGCA AGAAATGGCA 
CGATTTGTAA ACCAGTCTGT AGGTCGACCA ATCAGCATCA AGGAACAGGA AAACAAGGAG 
TGGCAGGGGA CAGAGGAGTC CGCGGAGGAA TTCCTTACCC CCAGGACCCT GCAGCAGAAA 
CTCAACGACG CCAGTGTCAC TGTCTCAAGC AAAATCTCCA TATCATTTGA ACTGAAACCA 
AAAGTGAAAA AGTCAGGACC AGATGCTGTT AAGAGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001292273.1
CDS	76..834
Translation	MSLFKPSHVFANLPDTASEMNKMNAFANDENKITEAKIDNRVIQVSSVGVVTLPPDRCRLTIRVTSTKENVADVKESTTRRLDYIIQTLHNHSVKDSDIQISKSMRRSDSMYQMDVEVTALFIDLHKCQNVSNLLVEKLDPTVTVCLPEFFHSSVTLQNLRHQASLLAIHNAKQKAQEMARFVNQSVGRPISIKEQENKEWQGTEESAEEFLTPRTLQQKLNDASVTVSSKISISFELKPKVKKSGPDAVKS

Target ORF information:

RefSeq Version	NM_001305344.1
Organism	Crassostrea gigas(Pacific oyster)
Definition	Crassostrea gigas interleukin-1 receptor-associated kinase 1-binding protein 1-like (LOC105344940), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001305344.1

ORF Insert Sequence:

ATGAGTTTAT TTAAGCCTTC TCATGTATTT GCTAATCTTC CCGACACAGC TTCGGAAATG 
AACAAAATGA ACGCATTTGC GAATGATGAA AACAAAATAA CGGAGGCTAA AATTGACAAC 
CGTGTAATCC AAGTTTCCTC TGTTGGAGTT GTAACACTGC CACCTGACCG ATGTAGGCTG 
ACAATCAGAG TCACATCAAC AAAAGAAAAT GTAGCTGACG TGAAAGAGAG CACGACAAGG 
AGACTAGATT ATATCATTCA GACTCTTCAC AATCACTCGG TTAAGGATTC TGACATACAG 
ATAAGTAAAA GTATGCGTCG GTCAGATTCA ATGTACCAGA TGGATGTAGA AGTGACAGCT 
CTTTTCATTG ACCTCCACAA ATGTCAAAAT GTCTCCAATT TACTGGTAGA GAAACTTGAC 
CCAACAGTGA CAGTGTGCTT ACCAGAATTT TTTCATTCCT CTGTAACTTT ACAGAATCTC 
AGACATCAAG CTAGTCTCCT CGCCATTCAT AATGCCAAAC AGAAAGCGCA AGAAATGGCA 
CGATTTGTAA ACCAGTCTGT AGGTCGACCA ATCAGCATCA AGGAACAGGA AAACAAGGAG 
TGGCAGGGGA CAGAGGAGTC CGCGGAGGAA TTCCTTACCC CCAGGACCCT GCAGCAGAAA 
CTCAACGACG CCAGTGTCAC TGTCTCAAGC AAAATCTCCA TATCATTTGA ACTGAAACCA 
AAAGTGAAAA AGTCAGGACC AGATGCTGTT AAGAGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Identification and functional characterization of SIMPL in Crassostrea gigas reveals its ancient origin and involvement in the regulation of Rel/NF-?B transcription activity.
Fish & shellfish immunology40(1)239-44(2014 Sep)
Zhang Y,Li J,Yu F,Tong Y,Zhang Y,Xiang Z,Yu Z

The first homolog of a TRAF7 (TNF receptor-associated factor 7) gene in a mollusk, Crassostrea hongkongensis.
Fish & shellfish immunology31(6)1208-10(2011 Dec)
Fu D,Zhang Y,Xiao S,Yu Z