LOC100175607 cDNA ORF clone, Ciona intestinalis(vase tunicate)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100175607
Entrez Gene ID	100175607
Full Name	sphingolipid delta(4)-desaturase DES1-like
Gene Type	protein-coding
Organism	Ciona intestinalis(vase tunicate)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018811864.1	XP_018667409.1	sphingolipid delta(4)-desaturase DES1

Pathways from BioSystems
Gene Ontology

The following LOC100175607 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100175607 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCi73304	XM_018811864.1 Latest version!	Ciona intestinalis sphingolipid delta(4)-desaturase DES1 (LOC100175607), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100175607 ( XM_018811864.1 ) cDNA ORF clone, Ciona intestinalis(vase tunicate) -> XP_018667409.1 Ciona intestinalis sphingolipid delta(4)-desaturase DES1 (LOC100175607), mRNA.

Price & Availability↑

CloneID	OCi73304
Clone ID Related Accession (Same CDS sequence)	XM_018811864.1
Accession Version	XM_018811864.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1137bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-10-21
Organism	Ciona intestinalis(vase tunicate)
Product	sphingolipid delta(4)-desaturase DES1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_020170.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ciona intestinalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END##

ATGGGTACTA AAGTATCGCG TAACGATTTT GAATGGGTTT ACACCGACCA ACCGCACGGA 
GATCGAAGAA GAGCAATGCT TAAGAAGTAT CCTCAAATCA AGAAGCTATT CTGTATCGAC 
GCACACTTCA AATACGTGGT GGCAGCCATG GTAGCCGCGC AAGTTATAGC GTGTTACTTT 
GTGAAGGACA TGAGCTGGCC ATGGATATTG GCCCTTGCTT ATTTCTTTGG TGGTACCATT 
AATCATTCAC TTACACTTGC TATCCATGAT ATATCCCATA ACACTGCATA TGGCTACCAG 
CATGCCAAGT GGAATAGATA TTTCGGCATG TTTGCCAATT TACCAATTGG TGTGCCTATG 
TCAATCAGTT TTAAAAAATA TCACATTGAT CATCATAGAT ATCTAGGTGG AGATGTACTG 
GATGTTGATC TGCCGACACC AATAGAAGGA TATTTATTCC GGAACAGTTT TTTGAAACTA 
ATTTGGTTAA TTTTGAACCC ACTTTTCTAC GTACTGAGAC CATTAGCTGT AAATCCCAAA 
CCACTGACAG TACTGGAGCT TCACAATGCT GTTATTCAAG TTATATTCGA TGGACTCATA 
ATGTACTTCT TTGGGTATAA AGCTGTACTT TATCTGGTAG TTGGCACTTT GATTTCAATG 
GGAATCCACC CTATTACCGG GCACTTTATT TCAGAGCATT ACATGTACAC AAAAGGCCAT 
GAAACTTATT CTTATTATGG AATTTTGAAT CTTATAACAT TTAATGTAGG ATATCATATG 
GAGCATCATG ATTTTCCTGC CATTCCCAGT TCAAAGTTGC CGCTGATGAA AAAAATTGCT 
CCCGATTTTT ACGATGACTT GCCAAGCTAT ACTTCATGGT GCAAGGTGCT GTGGGACTTT 
GTTTTTGATC CAGCTATTGG ACCCTTTGCC AGGGTAAGAA GAGAAATTGA GTTAGAGCAA 
TCGAAGATGC AACTGTCAAA TGGTAATAGG CATGCAAATG GAGTTATAGG CTCAGAAGTA 
ACCAAGACAC ACCTATCAAA TGGAAATGGT CATTCAAATG GTGTTTTAAG CAATGGAAAA 
ATGTTGAATG GTTACCACCA GAATGGTGTT CTATCAAATG GTGATTCAGC CGAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018667409.1
CDS	1..1137
Translation	MGTKVSRNDFEWVYTDQPHGDRRRAMLKKYPQIKKLFCIDAHFKYVVAAMVAAQVIACYFVKDMSWPWILALAYFFGGTINHSLTLAIHDISHNTAYGYQHAKWNRYFGMFANLPIGVPMSISFKKYHIDHHRYLGGDVLDVDLPTPIEGYLFRNSFLKLIWLILNPLFYVLRPLAVNPKPLTVLELHNAVIQVIFDGLIMYFFGYKAVLYLVVGTLISMGIHPITGHFISEHYMYTKGHETYSYYGILNLITFNVGYHMEHHDFPAIPSSKLPLMKKIAPDFYDDLPSYTSWCKVLWDFVFDPAIGPFARVRREIELEQSKMQLSNGNRHANGVIGSEVTKTHLSNGNGHSNGVLSNGKMLNGYHQNGVLSNGDSAE

Target ORF information:

RefSeq Version	XM_018811864.1
Organism	Ciona intestinalis(vase tunicate)
Definition	Ciona intestinalis sphingolipid delta(4)-desaturase DES1 (LOC100175607), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018811864.1

ORF Insert Sequence:

ATGGGTACTA AAGTATCGCG TAACGATTTT GAATGGGTTT ACACCGACCA ACCGCACGGA 
GATCGAAGAA GAGCAATGCT TAAGAAGTAT CCTCAAATCA AGAAGCTATT CTGTATCGAC 
GCACACTTCA AATACGTGGT GGCAGCCATG GTAGCCGCGC AAGTTATAGC GTGTTACTTT 
GTGAAGGACA TGAGCTGGCC ATGGATATTG GCCCTTGCTT ATTTCTTTGG TGGTACCATT 
AATCATTCAC TTACACTTGC TATCCATGAT ATATCCCATA ACACTGCATA TGGCTACCAG 
CATGCCAAGT GGAATAGATA TTTCGGCATG TTTGCCAATT TACCAATTGG TGTGCCTATG 
TCAATCAGTT TTAAAAAATA TCACATTGAT CATCATAGAT ATCTAGGTGG AGATGTACTG 
GATGTTGATC TGCCGACACC AATAGAAGGA TATTTATTCC GGAACAGTTT TTTGAAACTA 
ATTTGGTTAA TTTTGAACCC ACTTTTCTAC GTACTGAGAC CATTAGCTGT AAATCCCAAA 
CCACTGACAG TACTGGAGCT TCACAATGCT GTTATTCAAG TTATATTCGA TGGACTCATA 
ATGTACTTCT TTGGGTATAA AGCTGTACTT TATCTGGTAG TTGGCACTTT GATTTCAATG 
GGAATCCACC CTATTACCGG GCACTTTATT TCAGAGCATT ACATGTACAC AAAAGGCCAT 
GAAACTTATT CTTATTATGG AATTTTGAAT CTTATAACAT TTAATGTAGG ATATCATATG 
GAGCATCATG ATTTTCCTGC CATTCCCAGT TCAAAGTTGC CGCTGATGAA AAAAATTGCT 
CCCGATTTTT ACGATGACTT GCCAAGCTAT ACTTCATGGT GCAAGGTGCT GTGGGACTTT 
GTTTTTGATC CAGCTATTGG ACCCTTTGCC AGGGTAAGAA GAGAAATTGA GTTAGAGCAA 
TCGAAGATGC AACTGTCAAA TGGTAATAGG CATGCAAATG GAGTTATAGG CTCAGAAGTA 
ACCAAGACAC ACCTATCAAA TGGAAATGGT CATTCAAATG GTGTTTTAAG CAATGGAAAA 
ATGTTGAATG GTTACCACCA GAATGGTGTT CTATCAAATG GTGATTCAGC CGAATAA