Gene Symbol | ptrn-1 |
Entrez Gene ID | 181743 |
Full Name | Patronin (microtubule-binding protein) homolog |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » ptrn-1 cDNA ORF clone
Gene Symbol | ptrn-1 |
Entrez Gene ID | 181743 |
Full Name | Patronin (microtubule-binding protein) homolog |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_078350.6 | NP_510751.4 | Patronin (microtubule-binding protein) homolog |
NM_001307900.1 | NP_001294829.1 | Patronin (microtubule-binding protein) homolog |
NM_078350.7 | NP_510751.4 | Patronin (microtubule-binding protein) homolog |
NM_001307917.1 | NP_001294846.1 | Patronin (microtubule-binding protein) homolog |
NM_001307918.3 | NP_001294847.1 | Patronin (microtubule-binding protein) homolog |
NM_001307900.3 | NP_001294829.1 | Patronin (microtubule-binding protein) homolog |
NM_001307918.1 | NP_001294847.1 | Patronin (microtubule-binding protein) homolog |
NM_001307917.3 | NP_001294846.1 | Patronin (microtubule-binding protein) homolog |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
DAPK-1 and PTRN-1 physically interact in co-immunoprecipitation experiments, and DAPK-1 itself undergoes microtubule-dependent transport.
Title: DAPK interacts with Patronin and the microtubule cytoskeleton in epidermal development and wound repair.
These results show that NOCA-1 acts with gamma-tubulin to assemble non-centrosomal arrays in multiple tissues and highlight functional overlap between the ninein and Patronin protein families.
Title: NOCA-1 functions with ?-tubulin and in parallel to Patronin to assemble non-centrosomal microtubule arrays in C. elegans.
PTRN-1 and DLK-1 function together to promote axonal regrowth.
Title: The microtubule minus-end-binding protein patronin/PTRN-1 is required for axon regeneration in C. elegans.
Propose a model whereby minus-end microtubule stabilization mediated by a functional PTRN-1 is necessary for morphological maintenance of neurons in C.elegans.
Title: The Caenorhabditis elegans microtubule minus-end binding homolog PTRN-1 stabilizes synapses and neurites.
Suggest that PTRN-1 represents an important mechanism for promoting microtubule stability in neurons.
Title: PTRN-1, a microtubule minus end-binding CAMSAP homolog, promotes microtubule function in Caenorhabditis elegans neurons.
The following ptrn-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ptrn-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa350214 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307918.3 , NM_001307918.1 | |
Accession Version | NM_001307918.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Oct 18, 2019 this sequence version replaced NM_001307918.2. COMPLETENESS: incomplete on the 5' end. |
1 | ATGACTTACA AACAAGAAAT GCCAGCAAGG TCGATACCAT CGAGGAGGAC GTGGCAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294847.1 |
CDS | 1..1161 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307918.3 |
1 | ATGACTTACA AACAAGAAAT GCCAGCAAGG TCGATACCAT CGAGGAGGAC GTGGCAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa350214 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307918.3 , NM_001307918.1 | |
Accession Version | NM_001307918.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on both ends. |
1 | ATGACTTACA AACAAGAAAT GCCAGCAAGG TCGATACCAT CGAGGAGGAC GTGGCAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294847.1 |
CDS | 1..1161 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307918.1 |
1 | ATGACTTACA AACAAGAAAT GCCAGCAAGG TCGATACCAT CGAGGAGGAC GTGGCAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa349225 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307900.1 , NM_001307900.3 | |
Accession Version | NM_001307900.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on both ends. |
1 | ATGACATTGC CGATGAACGC AGCTGCACAA ATGACACAGT CTTATATTCA ACATCCACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294829.1 |
CDS | 1..1794 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307900.1 |
1 | ATGACATTGC CGATGAACGC AGCTGCACAA ATGACACAGT CTTATATTCA ACATCCACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa349225 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307900.1 , NM_001307900.3 | |
Accession Version | NM_001307900.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Oct 18, 2019 this sequence version replaced NM_001307900.2. COMPLETENESS: incomplete on the 5' end. |
1 | ATGACATTGC CGATGAACGC AGCTGCACAA ATGACACAGT CTTATATTCA ACATCCACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294829.1 |
CDS | 1..1794 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307900.3 |
1 | ATGACATTGC CGATGAACGC AGCTGCACAA ATGACACAGT CTTATATTCA ACATCCACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa348741 | |
Clone ID Related Accession (Same CDS sequence) | NM_078350.6 , NM_078350.7 | |
Accession Version | NM_078350.6 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3333bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Apr 20, 2015 this sequence version replaced NM_078350.5. COMPLETENESS: incomplete on both ends. |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_510751.4 |
CDS | 1..3333 |
Translation |
Target ORF information:
Target ORF information:
|
NM_078350.6 |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa348741 | |
Clone ID Related Accession (Same CDS sequence) | NM_078350.6 , NM_078350.7 | |
Accession Version | NM_078350.7 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3333bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Sep 4, 2019 this sequence version replaced NM_078350.6. |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_510751.4 |
CDS | 20..3352 |
Translation |
Target ORF information:
Target ORF information:
|
NM_078350.7 |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa350213 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307917.1 , NM_001307917.3 | |
Accession Version | NM_001307917.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3339bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on both ends. |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294846.1 |
CDS | 1..3339 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307917.1 |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa350213 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307917.1 , NM_001307917.3 | |
Accession Version | NM_001307917.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3339bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Patronin (microtubule-binding protein) homolog | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Oct 18, 2019 this sequence version replaced NM_001307917.2. |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294846.1 |
CDS | 20..3358 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307917.3 |
1 | ATGGACTTCC CTTTGCCGGC TCTGCTTGCA ATAGAGGATT ATGATGAAAA TGAGGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |