LOC103850340 cDNA ORF clone, Brassica rapa(field mustard)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103850340
Entrez Gene ID	103850340
Full Name	protein UPSTREAM OF FLC
Gene Type	protein-coding
Organism	Brassica rapa(field mustard)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009127077.2	XP_009125325.1	protein UPSTREAM OF FLC isoform X1
XM_009127078.2	XP_009125326.1	protein UPSTREAM OF FLC isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC103850340 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103850340 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBr05688	XM_009127077.2 Latest version!	Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OBr137475	XM_009127078.2 Latest version!	Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103850340 ( XM_009127077.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009125325.1 Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBr05688
Clone ID Related Accession (Same CDS sequence)	XM_009127077.2
Accession Version	XM_009127077.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	protein UPSTREAM OF FLC isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024796.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009127077.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCTG CAAGAAGAAG AGGCAGAGAG AGCAACAAAA GTCCAGAGAG GCTAATAAGG 
TCTTTAAATC TTCAGCAAGA TGATGAAGAA GAGGAGGCCA AGACAAAGAG ACCAATCTTC 
AGAAGAGTCC AAGTCGTTTA TTATCTCACT AGAAATGGCC ACCTCGAACA CCCTCACTTC 
ATCGAAGTCA TTACTCCGGT TAACCAGCAT CTCCGGTTAA GAGATGTGAT GAACAGGCTT 
ACTGTTTTGA GAGGGAAGAA CATGCCATCA CTATACGCTT GGTCATGCAA AAGGAGCTAT 
AGAAATGGAT TCGTGTGGAA TGATTTAGCT GAAAACGATG TGATTTATCC GTCGAACTGT 
GGTGAGTATG TGTTGAAAGG GTCTGAGATC TCCGAGAATG TTGAAGAGAC ACATGTGAAG 
AGAACACTGT CTGGTCCAAA TCAAGAAGCG CCAAAAAGTC GACTTCTCAG GTTAAAACCA 
AAACTTCAAA ACAGAACGAC GTCGTTCGAC GACTCAGAGC TCTACGTCGG AGAAGATGAA 
GAAGAAGAAG ACGGAGAGTA CGGACTTTCC GAAGAGAAAA CCAGCTACAC ATCCTCCACA 
ACGCCGCAGT CTCGCTGCTC TCGTGGAATC TACACGGAGA CAATCGAATT CACCGAGAAA 
AAATCTAACT TGGTCAAGAC GGAGGAGAGC CTGCCGGTCC GGTCTGACTC GTCCGAGTTG 
ACTCGTTCCG CCGAGCGGGT CGAGGACGGT GACCCGGTGT GTCCCGGATC GGTTCGCGGG 
TCGATTTGGC TCCAGATGAT CTCGTGCGGG CACATAGCCA AGCACTACGC TCCGAGTCTG 
ATGAACTCGA GACCAAAGGA AGAGAGTCTT CGAAAAGGTG TCATGTGCAA GAACGTTGTG 
AAGAAGGCTG TCGTGGAAGA CGAACGTGAG ATGATAAGGT TCATGTCGGA GAATCCGAGG 
TTCGGGAATC CTCAGGCGGA GGAGAAAGAG TATTTCAGCG GCAGCATCGT TGAGTCAGTG 
AGTCATGAAC GAGTCACGGC ACAACCCACG TTGAGACGAT CCAACTCGTT CAACGAGGAA 
AGATCAAAGG TTGTGGATAT GGCTAAGGAG GTGAAGGATC AAGAGGAAAA GGAAGAAAGA 
TCGAACGTGA AGGTGAGATG TATACCGAGG AGGAAGAGCT CATCGTGCTT AATGTCTTCA 
TCGAAGCAAA CCAAGAATTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009125325.1
CDS	79..1299
Translation	MEAARRRGRESNKSPERLIRSLNLQQDDEEEEAKTKRPIFRRVQVVYYLTRNGHLEHPHFIEVITPVNQHLRLRDVMNRLTVLRGKNMPSLYAWSCKRSYRNGFVWNDLAENDVIYPSNCGEYVLKGSEISENVEETHVKRTLSGPNQEAPKSRLLRLKPKLQNRTTSFDDSELYVGEDEEEEDGEYGLSEEKTSYTSSTTPQSRCSRGIYTETIEFTEKKSNLVKTEESLPVRSDSSELTRSAERVEDGDPVCPGSVRGSIWLQMISCGHIAKHYAPSLMNSRPKEESLRKGVMCKNVVKKAVVEDEREMIRFMSENPRFGNPQAEEKEYFSGSIVESVSHERVTAQPTLRRSNSFNEERSKVVDMAKEVKDQEEKEERSNVKVRCIPRRKSSSCLMSSSKQTKN

Target ORF information:

RefSeq Version	XM_009127077.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009127077.2

ORF Insert Sequence:

ATGGAAGCTG CAAGAAGAAG AGGCAGAGAG AGCAACAAAA GTCCAGAGAG GCTAATAAGG 
TCTTTAAATC TTCAGCAAGA TGATGAAGAA GAGGAGGCCA AGACAAAGAG ACCAATCTTC 
AGAAGAGTCC AAGTCGTTTA TTATCTCACT AGAAATGGCC ACCTCGAACA CCCTCACTTC 
ATCGAAGTCA TTACTCCGGT TAACCAGCAT CTCCGGTTAA GAGATGTGAT GAACAGGCTT 
ACTGTTTTGA GAGGGAAGAA CATGCCATCA CTATACGCTT GGTCATGCAA AAGGAGCTAT 
AGAAATGGAT TCGTGTGGAA TGATTTAGCT GAAAACGATG TGATTTATCC GTCGAACTGT 
GGTGAGTATG TGTTGAAAGG GTCTGAGATC TCCGAGAATG TTGAAGAGAC ACATGTGAAG 
AGAACACTGT CTGGTCCAAA TCAAGAAGCG CCAAAAAGTC GACTTCTCAG GTTAAAACCA 
AAACTTCAAA ACAGAACGAC GTCGTTCGAC GACTCAGAGC TCTACGTCGG AGAAGATGAA 
GAAGAAGAAG ACGGAGAGTA CGGACTTTCC GAAGAGAAAA CCAGCTACAC ATCCTCCACA 
ACGCCGCAGT CTCGCTGCTC TCGTGGAATC TACACGGAGA CAATCGAATT CACCGAGAAA 
AAATCTAACT TGGTCAAGAC GGAGGAGAGC CTGCCGGTCC GGTCTGACTC GTCCGAGTTG 
ACTCGTTCCG CCGAGCGGGT CGAGGACGGT GACCCGGTGT GTCCCGGATC GGTTCGCGGG 
TCGATTTGGC TCCAGATGAT CTCGTGCGGG CACATAGCCA AGCACTACGC TCCGAGTCTG 
ATGAACTCGA GACCAAAGGA AGAGAGTCTT CGAAAAGGTG TCATGTGCAA GAACGTTGTG 
AAGAAGGCTG TCGTGGAAGA CGAACGTGAG ATGATAAGGT TCATGTCGGA GAATCCGAGG 
TTCGGGAATC CTCAGGCGGA GGAGAAAGAG TATTTCAGCG GCAGCATCGT TGAGTCAGTG 
AGTCATGAAC GAGTCACGGC ACAACCCACG TTGAGACGAT CCAACTCGTT CAACGAGGAA 
AGATCAAAGG TTGTGGATAT GGCTAAGGAG GTGAAGGATC AAGAGGAAAA GGAAGAAAGA 
TCGAACGTGA AGGTGAGATG TATACCGAGG AGGAAGAGCT CATCGTGCTT AATGTCTTCA 
TCGAAGCAAA CCAAGAATTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC103850340 ( XM_009127078.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009125326.1 Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OBr137475
Clone ID Related Accession (Same CDS sequence)	XM_009127078.2
Accession Version	XM_009127078.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1188bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	protein UPSTREAM OF FLC isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024796.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009127078.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCTG CAAGAAGAAG AGGCAGAGAG AGCAACAAAA GTCCAGAGAG GCTAATAAGG 
TCTTTAAATC TTCAGCAAGA TGATGAAGAA GAGGAGGCCA AGACAAAGAG ACCAATCTTC 
AGAAGAGTCC AAGTCGTTTA TTATCTCACT AGAAATGGCC ACCTCGAACA CCCTCACTTC 
ATCGAAGTCA TTACTCCGGT TAACCAGCAT CTCCGGTTAA GAGATGTGAT GAACAGGCTT 
ACTGTTTTGA GAGGGAAGAA CATGCCATCA CTATACGCTT GGTCATGCAA AAGGAGCTAT 
AGAAATGGAT TCGTGTGGAA TGATTTAGCT GAAAACGATG TGATTTATCC GTCGAACTGT 
GAGAATGTTG AAGAGACACA TGTGAAGAGA ACACTGTCTG GTCCAAATCA AGAAGCGCCA 
AAAAGTCGAC TTCTCAGGTT AAAACCAAAA CTTCAAAACA GAACGACGTC GTTCGACGAC 
TCAGAGCTCT ACGTCGGAGA AGATGAAGAA GAAGAAGACG GAGAGTACGG ACTTTCCGAA 
GAGAAAACCA GCTACACATC CTCCACAACG CCGCAGTCTC GCTGCTCTCG TGGAATCTAC 
ACGGAGACAA TCGAATTCAC CGAGAAAAAA TCTAACTTGG TCAAGACGGA GGAGAGCCTG 
CCGGTCCGGT CTGACTCGTC CGAGTTGACT CGTTCCGCCG AGCGGGTCGA GGACGGTGAC 
CCGGTGTGTC CCGGATCGGT TCGCGGGTCG ATTTGGCTCC AGATGATCTC GTGCGGGCAC 
ATAGCCAAGC ACTACGCTCC GAGTCTGATG AACTCGAGAC CAAAGGAAGA GAGTCTTCGA 
AAAGGTGTCA TGTGCAAGAA CGTTGTGAAG AAGGCTGTCG TGGAAGACGA ACGTGAGATG 
ATAAGGTTCA TGTCGGAGAA TCCGAGGTTC GGGAATCCTC AGGCGGAGGA GAAAGAGTAT 
TTCAGCGGCA GCATCGTTGA GTCAGTGAGT CATGAACGAG TCACGGCACA ACCCACGTTG 
AGACGATCCA ACTCGTTCAA CGAGGAAAGA TCAAAGGTTG TGGATATGGC TAAGGAGGTG 
AAGGATCAAG AGGAAAAGGA AGAAAGATCG AACGTGAAGG TGAGATGTAT ACCGAGGAGG 
AAGAGCTCAT CGTGCTTAAT GTCTTCATCG AAGCAAACCA AGAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009125326.1
CDS	81..1268
Translation	MEAARRRGRESNKSPERLIRSLNLQQDDEEEEAKTKRPIFRRVQVVYYLTRNGHLEHPHFIEVITPVNQHLRLRDVMNRLTVLRGKNMPSLYAWSCKRSYRNGFVWNDLAENDVIYPSNCENVEETHVKRTLSGPNQEAPKSRLLRLKPKLQNRTTSFDDSELYVGEDEEEEDGEYGLSEEKTSYTSSTTPQSRCSRGIYTETIEFTEKKSNLVKTEESLPVRSDSSELTRSAERVEDGDPVCPGSVRGSIWLQMISCGHIAKHYAPSLMNSRPKEESLRKGVMCKNVVKKAVVEDEREMIRFMSENPRFGNPQAEEKEYFSGSIVESVSHERVTAQPTLRRSNSFNEERSKVVDMAKEVKDQEEKEERSNVKVRCIPRRKSSSCLMSSSKQTKN

Target ORF information:

RefSeq Version	XM_009127078.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa protein UPSTREAM OF FLC (LOC103850340), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009127078.2

ORF Insert Sequence:

ATGGAAGCTG CAAGAAGAAG AGGCAGAGAG AGCAACAAAA GTCCAGAGAG GCTAATAAGG 
TCTTTAAATC TTCAGCAAGA TGATGAAGAA GAGGAGGCCA AGACAAAGAG ACCAATCTTC 
AGAAGAGTCC AAGTCGTTTA TTATCTCACT AGAAATGGCC ACCTCGAACA CCCTCACTTC 
ATCGAAGTCA TTACTCCGGT TAACCAGCAT CTCCGGTTAA GAGATGTGAT GAACAGGCTT 
ACTGTTTTGA GAGGGAAGAA CATGCCATCA CTATACGCTT GGTCATGCAA AAGGAGCTAT 
AGAAATGGAT TCGTGTGGAA TGATTTAGCT GAAAACGATG TGATTTATCC GTCGAACTGT 
GAGAATGTTG AAGAGACACA TGTGAAGAGA ACACTGTCTG GTCCAAATCA AGAAGCGCCA 
AAAAGTCGAC TTCTCAGGTT AAAACCAAAA CTTCAAAACA GAACGACGTC GTTCGACGAC 
TCAGAGCTCT ACGTCGGAGA AGATGAAGAA GAAGAAGACG GAGAGTACGG ACTTTCCGAA 
GAGAAAACCA GCTACACATC CTCCACAACG CCGCAGTCTC GCTGCTCTCG TGGAATCTAC 
ACGGAGACAA TCGAATTCAC CGAGAAAAAA TCTAACTTGG TCAAGACGGA GGAGAGCCTG 
CCGGTCCGGT CTGACTCGTC CGAGTTGACT CGTTCCGCCG AGCGGGTCGA GGACGGTGAC 
CCGGTGTGTC CCGGATCGGT TCGCGGGTCG ATTTGGCTCC AGATGATCTC GTGCGGGCAC 
ATAGCCAAGC ACTACGCTCC GAGTCTGATG AACTCGAGAC CAAAGGAAGA GAGTCTTCGA 
AAAGGTGTCA TGTGCAAGAA CGTTGTGAAG AAGGCTGTCG TGGAAGACGA ACGTGAGATG 
ATAAGGTTCA TGTCGGAGAA TCCGAGGTTC GGGAATCCTC AGGCGGAGGA GAAAGAGTAT 
TTCAGCGGCA GCATCGTTGA GTCAGTGAGT CATGAACGAG TCACGGCACA ACCCACGTTG 
AGACGATCCA ACTCGTTCAA CGAGGAAAGA TCAAAGGTTG TGGATATGGC TAAGGAGGTG 
AAGGATCAAG AGGAAAAGGA AGAAAGATCG AACGTGAAGG TGAGATGTAT ACCGAGGAGG 
AAGAGCTCAT CGTGCTTAAT GTCTTCATCG AAGCAAACCA AGAATTGA