Gene Symbol | HAVCR2 |
Entrez Gene ID | 768047 |
Full Name | hepatitis A virus cellular receptor 2 |
Synonyms | Tim-3 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » HAVCR2 cDNA ORF clone
Gene Symbol | HAVCR2 |
Entrez Gene ID | 768047 |
Full Name | hepatitis A virus cellular receptor 2 |
Synonyms | Tim-3 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_010807556.3 | XP_010805858.1 | hepatitis A virus cellular receptor 2 isoform X2 |
XM_010807556.2 | XP_010805858.1 | hepatitis A virus cellular receptor 2 isoform X2 |
XM_010807555.2 | XP_010805857.1 | hepatitis A virus cellular receptor 2 isoform X1 |
XM_010807559.2 | XP_010805861.1 | hepatitis A virus cellular receptor 2 isoform X4 |
XM_010807554.2 | XP_010805856.1 | hepatitis A virus cellular receptor 2 isoform X1 |
XM_010807557.2 | XP_010805859.1 | hepatitis A virus cellular receptor 2 isoform X3 |
XM_010807554.3 | XP_010805856.1 | hepatitis A virus cellular receptor 2 isoform X1 |
NM_001077105.2 | NP_001070573.1 | hepatitis A virus cellular receptor 2 precursor |
Increased bovine Tim-3 and its ligand expressions during bovine leukemia virus infection.
Okagawa T, Konnai S, Ikebuchi R, Suzuki S, Shirai T, Sunden Y, Onuma M, Murata S, Ohashi K
Veterinary research4345(2012 May)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The Tim-3/Gal-9 pathway might link disease progression with T cell exhaustion during bovine leukemia virus infection.
Title: Increased bovine Tim-3 and its ligand expressions during bovine leukemia virus infection.
The following HAVCR2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HAVCR2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa36024 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807556.3 , XM_010807556.2 , NM_001077105.2 | |
Accession Version | NM_001077105.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC114846.1. On Aug 31, 2012 this sequence version replaced NM_001077105.1. ##Evidence-Data-START## Transcript exon combination :: BC114846.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001070573.1 |
CDS | 62..904 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001077105.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa36024 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807556.3 , XM_010807556.2 , NM_001077105.2 | |
Accession Version | XM_010807556.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010807556.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805858.1 |
CDS | 197..1039 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807556.3 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa36024 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807556.3 , XM_010807556.2 , NM_001077105.2 | |
Accession Version | XM_010807556.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104048.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807556.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805858.1 |
CDS | 642..1484 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807556.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa56931 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807555.2 , XM_010807554.2 , XM_010807554.3 | |
Accession Version | XM_010807555.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807555.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805857.1 |
CDS | 148..1032 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807555.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa56931 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807555.2 , XM_010807554.2 , XM_010807554.3 | |
Accession Version | XM_010807554.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104048.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807554.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805856.1 |
CDS | 561..1445 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807554.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa56931 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807555.2 , XM_010807554.2 , XM_010807554.3 | |
Accession Version | XM_010807554.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010807554.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805856.1 |
CDS | 283..1167 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807554.3 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa56932 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807557.2 | |
Accession Version | XM_010807557.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 795bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104048.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807557.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805859.1 |
CDS | 575..1369 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807557.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa56934 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807559.2 | |
Accession Version | XM_010807559.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 741bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | hepatitis A virus cellular receptor 2 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104048.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807559.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805861.1 |
CDS | 567..1307 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807559.2 |
1 | ATGTTTTCAC ATCTTCTTTT TGATTGTGTC CTGCTCATGC TGCTACTGCT TACAAGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Increased bovine Tim-3 and its ligand expressions during bovine leukemia virus infection. |
A whole-genome assembly of the domestic cow, Bos taurus. |