CDC42SE1 cDNA ORF clone, Bos taurus(cattle)

Gene
Clones
gRNAs

Summary

Gene Symbol	CDC42SE1
Entrez Gene ID	614042
Full Name	CDC42 small effector 1
General protein information	Preferred Names CDC42 small effector 1 Names CDC42 small effector protein 1
Gene Type	protein-coding
Organism	Bos taurus(cattle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015462774.1	XP_015318260.1	CDC42 small effector protein 1 isoform X1
XM_015462774.2	XP_015318260.1	CDC42 small effector protein 1 isoform X1
XM_024989689.1	XP_024845457.1	CDC42 small effector protein 1 isoform X1
NM_001035112.1	NP_001030284.1	CDC42 small effector protein 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CDC42SE1	XP_001166242.2
	CDC42SE1	XP_002801812.1
Canis lupus familiaris (dog)	CDC42SE1	NP_001034132.1
Gallus gallus (chicken)	LOC100859506	XP_003642715.1
Homo sapiens (human)	CDC42SE1	NP_001033796.1
Bos taurus (cattle)	CDC42SE1	NP_001030284.1
Rattus norvegicus (Norway rat)	Cdc42se1	NP_001034133.1
Xenopus tropicalis (tropical clawed frog)	cdc42se1	NP_001025615.1
Mus musculus (house mouse)	Cdc42se1	NP_001033797.1
Gallus gallus (chicken)	CDC42SE1	XP_004948406.1
Danio rerio (zebrafish)	cdc42se1	NP_956354.1

Gene Ontology
Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)

Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CDC42SE1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CDC42SE1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OBa42779	NM_001035112.1 Latest version!	Bos taurus CDC42 small effector 1 (CDC42SE1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OBa42779	XM_015462774.2 Latest version!	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OBa42779	XM_024989689.1 Latest version!	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
OBa42779	XM_015462774.1	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CDC42SE1 ( NM_001035112.1 ) cDNA ORF clone, Bos taurus(cattle) -> NP_001030284.1 Bos taurus CDC42 small effector 1 (CDC42SE1), mRNA.

Price & Availability↑

CloneID	OBa42779
Clone ID Related Accession (Same CDS sequence)	XM_015462774.1 , XM_015462774.2 , XM_024989689.1 , NM_001035112.1
Accession Version	NM_001035112.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 240bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-18
Organism	Bos taurus(cattle)
Product	CDC42 small effector protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC102825.1. On or before Oct 24, 2005 this sequence version replaced XM_866373.1, XM_878360.1. ##Evidence-Data-START## Transcript exon combination :: BC102825.1, BT021151.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END##

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001030284.1
CDS	385..624
Translation	MSEFWHKLGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAMTGAVQEQMRSKGNRDRPWSNSRGL

Target ORF information:

RefSeq Version	NM_001035112.1
Organism	Bos taurus(cattle)
Definition	Bos taurus CDC42 small effector 1 (CDC42SE1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001035112.1

ORF Insert Sequence:

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CDC42SE1 ( XM_015462774.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015318260.1 Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBa42779
Clone ID Related Accession (Same CDS sequence)	XM_015462774.1 , XM_015462774.2 , XM_024989689.1 , NM_001035112.1
Accession Version	XM_015462774.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 240bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	CDC42 small effector protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103863.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015318260.1
CDS	345..584
Translation	MSEFWHKLGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAMTGAVQEQMRSKGNRDRPWSNSRGL

Target ORF information:

RefSeq Version	XM_015462774.1
Organism	Bos taurus(cattle)
Definition	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015462774.1

ORF Insert Sequence:

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CDC42SE1 ( XM_015462774.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015318260.1 Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBa42779
Clone ID Related Accession (Same CDS sequence)	XM_015462774.1 , XM_015462774.2 , XM_024989689.1 , NM_001035112.1
Accession Version	XM_015462774.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 240bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	CDC42 small effector protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015462774.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015318260.1
CDS	396..635
Translation	MSEFWHKLGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAMTGAVQEQMRSKGNRDRPWSNSRGL

Target ORF information:

RefSeq Version	XM_015462774.2
Organism	Bos taurus(cattle)
Definition	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015462774.2

ORF Insert Sequence:

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CDC42SE1 ( XM_024989689.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_024845457.1 Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OBa42779
Clone ID Related Accession (Same CDS sequence)	XM_015462774.1 , XM_015462774.2 , XM_024989689.1 , NM_001035112.1
Accession Version	XM_024989689.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 240bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	CDC42 small effector protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_024845457.1
CDS	396..635
Translation	MSEFWHKLGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAMTGAVQEQMRSKGNRDRPWSNSRGL

Target ORF information:

RefSeq Version	XM_024989689.1
Organism	Bos taurus(cattle)
Definition	Bos taurus CDC42 small effector 1 (CDC42SE1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_024989689.1

ORF Insert Sequence:

ATGAGTGAAT TTTGGCACAA ACTGGGCTGC TGCGTGGTAG AGAAACCCCA GCCGAAGAAG 
AAGAGGAGAC GGATTGACCG GACCATGATT GGGGAACCAA TGAATTTTGT CCACCTGACT 
CACATCGGCT CTGGGGAGAT GGGGGCCGGA GATGGACTTG CCATGACAGG TGCAGTTCAG 
GAGCAGATGA GATCCAAGGG AAACCGAGAC AGGCCATGGA GCAATTCTAG GGGCTTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL

Characterization of 954 bovine full-CDS cDNA sequences.
BMC genomics6166(2005 Nov)
Harhay GP,Sonstegard TS,Keele JW,Heaton MP,Clawson ML,Snelling WM,Wiedmann RT,Van Tassell CP,Smith TP

Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Genome research11(4)626-30(2001 Apr)
Smith TP,Grosse WM,Freking BA,Roberts AJ,Stone RT,Casas E,Wray JE,White J,Cho J,Fahrenkrug SC,Bennett GL,Heaton MP,Laegreid WW,Rohrer GA,Chitko-McKown CG,Pertea G,Holt I,Karamycheva S,Liang F,Quackenbush J,Keele JW

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CDC42SE1 cDNA ORF clone, Bos taurus(cattle)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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