Gene Symbol | RUNX1T1 |
Entrez Gene ID | 538628 |
Full Name | RUNX1 translocation partner 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » RUNX1T1 cDNA ORF clone
Gene Symbol | RUNX1T1 |
Entrez Gene ID | 538628 |
Full Name | RUNX1 translocation partner 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_025001688.1 | XP_024857456.1 | protein CBFA2T1 isoform X1 |
XM_025001689.1 | XP_024857457.1 | protein CBFA2T1 isoform X2 |
XM_025001690.1 | XP_024857458.1 | protein CBFA2T1 isoform X3 |
XM_025001691.1 | XP_024857459.1 | protein CBFA2T1 isoform X4 |
XM_025001694.1 | XP_024857462.1 | protein CBFA2T1 isoform X5 |
NM_001099385.1 | NP_001092855.1 | protein CBFA2T1 |
XM_025001692.1 | XP_024857460.1 | protein CBFA2T1 isoform X5 |
XM_025001693.1 | XP_024857461.1 | protein CBFA2T1 isoform X5 |
NM_001359988.1 | NP_001346917.1 | protein CBFA2T1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RUNX1T1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RUNX1T1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa41061 | |
Clone ID Related Accession (Same CDS sequence) | NM_001099385.1 | |
Accession Version | NM_001099385.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC140669.1. On Jul 3, 2007 this sequence version replaced XM_876426.2. ##Evidence-Data-START## Transcript exon combination :: BC140669.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02947220, SAMN04019643 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTTCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092855.1 |
CDS | 366..1019 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001099385.1 |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTTCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222384 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001688.1 , NM_001359988.1 | |
Accession Version | NM_001359988.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1812bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-30 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC140669.1 and NKLS02000014.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on orthologous transcript alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN03145415, SAMN05861924 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346917.1 |
CDS | 366..2177 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359988.1 |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222384 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001688.1 , NM_001359988.1 | |
Accession Version | XM_025001688.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1812bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857456.1 |
CDS | 198..2009 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001688.1 |
1 | ATGATATCTG TCAAAAGAAA CACTTGGAGA GCACTGAGTT TAGTAATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222385 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001689.1 | |
Accession Version | XM_025001689.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATACAA AGCCGCGGTC CGGGGGCCGC CTGCGCTGCG GCGGCCGCCT CTCCTGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857457.1 |
CDS | 196..1992 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001689.1 |
1 | ATGAATACAA AGCCGCGGTC CGGGGGCCGC CTGCGCTGCG GCGGCCGCCT CTCCTGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222386 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001690.1 | |
Accession Version | XM_025001690.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1752bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGGAC TCTCCGGCCC TGTGCAGTAT CGTACCGAGA AGCACTCCAC GATGCCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857458.1 |
CDS | 364..2115 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001690.1 |
1 | ATGGTGGGAC TCTCCGGCCC TGTGCAGTAT CGTACCGAGA AGCACTCCAC GATGCCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222387 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001691.1 | |
Accession Version | XM_025001691.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1731bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGATC GTACCGAGAA GCACTCCACG ATGCCAGACT CACCTGTGGA TGTGAAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857459.1 |
CDS | 117..1847 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001691.1 |
1 | ATGCCCGATC GTACCGAGAA GCACTCCACG ATGCCAGACT CACCTGTGGA TGTGAAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222388 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001694.1 , XM_025001692.1 , XM_025001693.1 | |
Accession Version | XM_025001694.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1701bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857462.1 |
CDS | 232..1932 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001694.1 |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222388 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001694.1 , XM_025001692.1 , XM_025001693.1 | |
Accession Version | XM_025001692.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1701bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857460.1 |
CDS | 212..1912 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001692.1 |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222388 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001694.1 , XM_025001692.1 , XM_025001693.1 | |
Accession Version | XM_025001693.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1701bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CBFA2T1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857461.1 |
CDS | 191..1891 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001693.1 |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACC CCATCCAGGC TGACTCCTCC CACCATGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |