Gene Symbol | CIRBP |
Entrez Gene ID | 507120 |
Full Name | cold inducible RNA binding protein |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CIRBP cDNA ORF clone
Gene Symbol | CIRBP |
Entrez Gene ID | 507120 |
Full Name | cold inducible RNA binding protein |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005209263.3 | XP_005209320.1 | cold-inducible RNA-binding protein isoform X1 |
XM_024993976.1 | XP_024849744.1 | cold-inducible RNA-binding protein isoform X1 |
XM_005209264.3 | XP_005209321.1 | cold-inducible RNA-binding protein isoform X2 |
XM_010807223.2 | XP_010805525.1 | cold-inducible RNA-binding protein isoform X3 |
XM_024993977.1 | XP_024849745.1 | cold-inducible RNA-binding protein isoform X2 |
XM_024993978.1 | XP_024849746.1 | cold-inducible RNA-binding protein isoform X5 |
XM_024993979.1 | XP_024849747.1 | cold-inducible RNA-binding protein isoform X6 |
NM_001034278.1 | NP_001029450.1 | cold-inducible RNA-binding protein |
XM_005209263.4 | XP_005209320.1 | cold-inducible RNA-binding protein isoform X3 |
XM_005209264.4 | XP_005209321.1 | cold-inducible RNA-binding protein isoform X4 |
CIRBP | XP_002801048.1 | |
Rattus norvegicus (Norway rat) | Cirbp | NP_112409.2 |
Homo sapiens (human) | CIRBP | NP_001271.1 |
Gallus gallus (chicken) | CIRBP | NP_001026518.1 |
Danio rerio (zebrafish) | cirbpa | NP_001017797.1 |
Mus musculus (house mouse) | Cirbp | NP_031731.1 |
Pan troglodytes (chimpanzee) | CIRBP | XP_003953358.1 |
Canis lupus familiaris (dog) | CIRBP | XP_005633202.1 |
Bos taurus (cattle) | CIRBP | NP_001029450.1 |
Xenopus tropicalis (tropical clawed frog) | cirbp | NP_001017228.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CIRBP gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CIRBP cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa21405 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034278.1 | |
Accession Version | NM_001034278.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 642bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC102773.1. On or before Aug 31, 2013 this sequence version replaced XR_235245.1, XM_866079.1, XM_583679.2, XM_877753.1. ##Evidence-Data-START## Transcript exon combination :: BC102773.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001029450.1 |
CDS | 85..726 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001034278.1 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21402 | |
Clone ID Related Accession (Same CDS sequence) | XM_005209263.3 , XM_005209263.4 | |
Accession Version | XM_005209263.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 945bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104031.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005209263.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005209320.1 |
CDS | 124..1068 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005209263.3 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21402 | |
Clone ID Related Accession (Same CDS sequence) | XM_005209263.3 , XM_005209263.4 | |
Accession Version | XM_005209263.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 945bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005209263.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005209320.1 |
CDS | 156..1100 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005209263.4 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21403 | |
Clone ID Related Accession (Same CDS sequence) | XM_005209264.3 , XM_005209264.4 | |
Accession Version | XM_005209264.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104031.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005209264.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005209321.1 |
CDS | 124..1065 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005209264.3 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21403 | |
Clone ID Related Accession (Same CDS sequence) | XM_005209264.3 , XM_005209264.4 | |
Accession Version | XM_005209264.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005209264.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005209321.1 |
CDS | 156..1097 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005209264.4 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21404 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807223.2 , XM_024993978.1 | |
Accession Version | XM_010807223.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 786bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104031.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807223.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GTCTGTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805525.1 |
CDS | 60..845 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807223.2 |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GTCTGTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa21404 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807223.2 , XM_024993978.1 | |
Accession Version | XM_024993978.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 786bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GTCTGTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024849746.1 |
CDS | 150..935 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024993978.1 |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GTCTGTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa235852 | |
Clone ID Related Accession (Same CDS sequence) | XM_024993976.1 | |
Accession Version | XM_024993976.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1071bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GGTGAGACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024849744.1 |
CDS | 153..1223 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024993976.1 |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GGTGAGACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa235853 | |
Clone ID Related Accession (Same CDS sequence) | XM_024993977.1 | |
Accession Version | XM_024993977.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GGTGAGACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024849745.1 |
CDS | 150..1217 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024993977.1 |
1 | ATGAGCAGTC ACTGGAGCAG GTCTTCTCAA AGTATGGACA GATCTCTGAA GGTGAGACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa235854 | |
Clone ID Related Accession (Same CDS sequence) | XM_024993979.1 | |
Accession Version | XM_024993979.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cold-inducible RNA-binding protein isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024849747.1 |
CDS | 156..659 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024993979.1 |
1 | ATGGCATCAG ATGAGGGCAA GCTTTTCGTC GGAGGGCTGA GTTTTGACAC CAATGAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |