Gene Symbol | BOLA-DQA5 |
Entrez Gene ID | 282494 |
Full Name | major histocompatibility complex, class II, DQ alpha 5 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
Genome |
ORF » Species Summary » Bos taurus » BOLA-DQA5 cDNA ORF clone
Gene Symbol | BOLA-DQA5 |
Entrez Gene ID | 282494 |
Full Name | major histocompatibility complex, class II, DQ alpha 5 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005223565.3 | XP_005223622.1 | major histocompatibility complex, class II, DQ alpha 5 isoform X2 |
XM_015459849.1 | XP_015315335.1 | major histocompatibility complex, class II, DQ alpha 5 isoform X1 |
XM_005223565.2 | XP_005223622.1 | major histocompatibility complex, class II, DQ alpha 5 isoform X2 |
XM_015459849.2 | XP_015315335.1 | major histocompatibility complex, class II, DQ alpha 5 isoform X1 |
NM_001012675.2 | NP_001012693.2 | major histocompatibility complex, class II, DQ alpha 5 precursor |
Homo sapiens (human) | HLA-DQA2 | NP_064440.1 |
Bos taurus (cattle) | BOLA-DQA5 | NP_001012693.2 |
Xenopus tropicalis (tropical clawed frog) | hla-dqa1 | NP_001106538.1 |
Pan troglodytes (chimpanzee) | PATR-DQA2 | XP_527354.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100495492 | XP_002942061.2 |
Canis lupus familiaris (dog) | DLA-DQA1 | NP_001011726.1 |
Evidence for an additional cattle DQA locus, BoLA-DQA5.
Gelhaus A, F?rster B, Wippern C, Horstmann RD
Immunogenetics49(4)321-7(1999 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BOLA-DQA5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BOLA-DQA5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40575 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459849.1 , XM_015459849.2 , NM_001012675.2 | |
Accession Version | NM_001012675.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-10-22 | |
Organism | Bos taurus(cattle) | |
Product | major histocompatibility complex, class II, DQ alpha 5 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EV614021.1, EE251935.1 and EV733097.1. On Aug 30, 2012 this sequence version replaced NM_001012675.1. ##Evidence-Data-START## Transcript exon combination :: AF037314.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145418, SAMN03145419 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001012693.2 |
CDS | 65..832 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001012675.2 |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32079 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223565.3 , XM_005223565.2 | |
Accession Version | XM_005223565.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | major histocompatibility complex, class II, DQ alpha 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005223565.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223622.1 |
CDS | 74..718 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223565.3 |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32079 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223565.3 , XM_005223565.2 | |
Accession Version | XM_005223565.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | major histocompatibility complex, class II, DQ alpha 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104552.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005223565.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223622.1 |
CDS | 61..705 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223565.2 |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa40575 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459849.1 , XM_015459849.2 , NM_001012675.2 | |
Accession Version | XM_015459849.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | major histocompatibility complex, class II, DQ alpha 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104552.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015315335.1 |
CDS | 61..828 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015459849.1 |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa40575 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459849.1 , XM_015459849.2 , NM_001012675.2 | |
Accession Version | XM_015459849.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | major histocompatibility complex, class II, DQ alpha 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015459849.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015315335.1 |
CDS | 74..841 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015459849.2 |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGA ACCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evidence for an additional cattle DQA locus, BoLA-DQA5. |