Gene Symbol | SYP61 |
Entrez Gene ID | 839749 |
Full Name | syntaxin of plants 61 |
Synonyms | ATSYP61,F3M18.7,F3M18_7,OSM1,syntaxin of plants 61 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SYP61 cDNA ORF clone
Gene Symbol | SYP61 |
Entrez Gene ID | 839749 |
Full Name | syntaxin of plants 61 |
Synonyms | ATSYP61,F3M18.7,F3M18_7,OSM1,syntaxin of plants 61 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001036025.5 | NP_001031102.2 | syntaxin of plants 61 |
NM_102617.4 | NP_564310.1 | syntaxin of plants 61 |
NM_001332815.1 | NP_001321010.1 | syntaxin of plants 61 |
Rattus norvegicus (Norway rat) | Stx6 | NP_113853.1 |
Gallus gallus (chicken) | STX6 | NP_001006531.1 |
Pan troglodytes (chimpanzee) | STX6 | XP_514037.2 |
Canis lupus familiaris (dog) | STX6 | XP_005622446.1 |
Mus musculus (house mouse) | Stx6 | NP_067408.1 |
Schizosaccharomyces pombe (fission yeast) | tlg1 | NP_595989.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_08082 | XP_003715037.1 |
Neurospora crassa | NCU01199 | XP_961565.1 |
Arabidopsis thaliana (thale cress) | SYP61 | NP_564310.1 |
Oryza sativa (rice) | Os01g0963300 | NP_001045485.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006251 | XP_316317.4 |
Xenopus tropicalis (tropical clawed frog) | stx6 | NP_001039240.1 |
Homo sapiens (human) | STX6 | NP_005810.1 |
Bos taurus (cattle) | STX6 | NP_001075900.1 |
Danio rerio (zebrafish) | stx6 | NP_001017879.1 |
STX6 | XP_001114975.1 | |
Drosophila melanogaster (fruit fly) | Syx6 | NP_995814.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Post-Golgi trafficking of PIP2;7 involves interactions with Qc-SNARE SYP61 and Qa-SNARE SYP121. The proper delivery of PIP2;7 to the plasma membrane depends on the activity of the two SNAREs, and that the SNAREs colocalize and physically interact.
Title: Arabidopsis SNAREs SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability.
SYP61 facilitates the trafficking of proteins to the plasma membrane.
Title: Isolation and proteomic analysis of the SYP61 compartment reveal its role in exocytic trafficking in Arabidopsis.
A functional characterization of AtVPS45 (for vacuolar protein sorting 45), a protein from the Sec1/Munc18 family in Arabidopsis (Arabidopsis thaliana) that interacts at the trans-Golgi network (TGN) with the SYP41/SYP61/VTI12 SNARE complex, is reported.
Title: AtVPS45 is a positive regulator of the SYP41/SYP61/VTI12 SNARE complex involved in trafficking of vacuolar cargo.
The following SYP61 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SYP61 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb25050 | |
Clone ID Related Accession (Same CDS sequence) | NM_102617.4 | |
Accession Version | NM_102617.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 738bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 61 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_102617.3. |
1 | ATGTCTTCAG CTCAAGATCC ATTCTACATT GTTAAAGAAG AGATTCAGGA TTCTATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_564310.1 |
CDS | 197..934 |
Translation |
Target ORF information:
Target ORF information:
|
NM_102617.4 |
1 | ATGTCTTCAG CTCAAGATCC ATTCTACATT GTTAAAGAAG AGATTCAGGA TTCTATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb25051 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036025.5 | |
Accession Version | NM_001036025.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 61 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Jun 19, 2009 this sequence version replaced NM_001036025.4. |
1 | ATGTGGCGAA GGAGCTTGTT GCTACTTGTG GAAGCATTGA GTGGCAGGAA GGTAGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031102.2 |
CDS | 196..816 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036025.5 |
1 | ATGTGGCGAA GGAGCTTGTT GCTACTTGTG GAAGCATTGA GTGGCAGGAA GGTAGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33931 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332815.1 | |
Accession Version | NM_001332815.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 603bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 61 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCTATTG AAGCTGTTTT TACTGATAGG AAGGTAGATG AGCTGGAAAA AGCGATTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321010.1 |
CDS | 86..688 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332815.1 |
1 | ATGGCTATTG AAGCTGTTTT TACTGATAGG AAGGTAGATG AGCTGGAAAA AGCGATTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |