Gene Symbol | AT5G08565 |
Entrez Gene ID | 830757 |
Full Name | Transcription initiation Spt4-like protein |
Synonyms | SPT4-1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G08565 cDNA ORF clone
Gene Symbol | AT5G08565 |
Entrez Gene ID | 830757 |
Full Name | Transcription initiation Spt4-like protein |
Synonyms | SPT4-1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001203335.1 | NP_001190264.1 | Transcription initiation Spt4-like protein |
NM_120943.4 | NP_568201.1 | Transcription initiation Spt4-like protein |
Oryza sativa (rice) | Os07g0623400 | NP_001060323.2 |
Arabidopsis thaliana (thale cress) | AT5G08565 | NP_568201.1 |
Arabidopsis thaliana (thale cress) | SPT42 | NP_568976.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data indicate that SPT4 is a novel component of the plant RNA-directed DNA methylation pathway required for efficient DNA methylation at various loci and shares the locus specificity with SPT5L.
Title: The zinc-finger protein SPT4 interacts with SPT5L/KTF1 and modulates transcriptional silencing in Arabidopsis.
SPT4/SPT5 acts as a transcript elongation factor in Arabidopsis, regulating transcription during the elongation stage with particular impact on the expression of certain auxin-related genes.
Title: The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis.
The following AT5G08565 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G08565 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb17926 | |
Clone ID Related Accession (Same CDS sequence) | NM_120943.4 | |
Accession Version | NM_120943.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 351bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Transcription initiation Spt4-like protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_120943.3. |
1 | ATGGGAGAAG CGCCTGCCCA GATTCCGACG AGTTTCGGCC ACGAGCTTAG GGCTTGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_568201.1 |
CDS | 67..417 |
Translation |
Target ORF information:
Target ORF information:
|
NM_120943.4 |
1 | ATGGGAGAAG CGCCTGCCCA GATTCCGACG AGTTTCGGCC ACGAGCTTAG GGCTTGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb29608 | |
Clone ID Related Accession (Same CDS sequence) | NM_001203335.1 | |
Accession Version | NM_001203335.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 351bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Transcription initiation Spt4-like protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGAGAAG CGCCTGCCCA GATTCCGACG AGTTTCGGCC ACGAGCTTAG GGCTTGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001190264.1 |
CDS | 68..418 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001203335.1 |
1 | ATGGGAGAAG CGCCTGCCCA GATTCCGACG AGTTTCGGCC ACGAGCTTAG GGCTTGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |