ORF » Species Summary » Arabidopsis thaliana » AT5G06540 cDNA ORF clone

AT5G06540 cDNA ORF clone, Arabidopsis thaliana(thale cress)

The following AT5G06540 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G06540 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb17795 NM_120737.2
Latest version!		 Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT5G06540), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    AT5G06540 ( NM_120737.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_196272.1 Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT5G06540), partial mRNA.
    Price & Availability↑
    CloneID OAb17795
    Clone ID Related Accession (Same CDS sequence) NM_120737.2
    Accession Version NM_120737.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1869bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product Pentatricopeptide repeat (PPR) superfamily protein
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_120737.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGAGTAACA TTGTGCTCAA CACACTTCGA TTCAAACACC CGAAGCTTGC CTTGCTCCAA 
    TCCTGCTCTT CCTTTTCCGA CCTCAAGATC ATACATGGCT TTCTCTTACG AACCCATCTC 
    ATCTCCGACG TCTTCGTTGC CAGTCGTCTC CTCGCTCTCT GCGTTGACGA CTCCACCTTC 
    AACAAACCAA CCAATCTCTT GGGATATGCA TACGGAATCT TCTCTCAGAT TCAAAACCCT 
    AATCTTTTCG TCTTCAATCT ACTCATTCGC TGCTTCTCCA CTGGTGCAGA GCCTAGTAAG 
    GCTTTTGGGT TCTATACCCA GATGTTGAAA TCTCGGATTT GGCCAGATAA CATCACGTTT 
    CCGTTTCTGA TTAAGGCGTC TAGTGAGATG GAGTGTGTTC TAGTGGGAGA GCAAACGCAT 
    TCACAGATTG TTAGATTCGG ATTTCAGAAT GATGTTTATG TAGAGAATTC GCTTGTTCAT 
    ATGTACGCTA ATTGTGGGTT CATCGCTGCT GCTGGTAGAA TCTTTGGGCA AATGGGGTTT 
    CGAGATGTTG TTTCATGGAC TTCTATGGTG GCTGGGTATT GTAAATGCGG GATGGTTGAG 
    AATGCACGAG AGATGTTCGA TGAAATGCCT CACAGAAATT TGTTTACTTG GAGTATTATG 
    ATTAATGGGT ATGCGAAGAA CAACTGTTTT GAGAAAGCCA TTGACTTGTT TGAATTCATG 
    AAAAGGGAAG GAGTTGTCGC GAATGAGACG GTTATGGTGA GTGTGATTTC GTCTTGTGCT 
    CATTTGGGTG CACTTGAGTT TGGAGAAAGA GCATATGAGT ATGTGGTTAA GAGTCACATG 
    ACTGTGAATC TTATTCTTGG GACAGCTCTT GTGGATATGT TTTGGAGGTG TGGGGATATC 
    GAGAAAGCAA TTCATGTATT TGAGGGATTG CCTGAGACGG ATAGCTTGAG CTGGAGTTCA 
    ATAATCAAAG GTCTTGCAGT GCATGGGCAT GCTCACAAGG CAATGCATTA CTTCTCCCAA 
    ATGATTAGTT TAGGGTTTAT TCCAAGGGAT GTTACATTCA CAGCGGTTCT TTCAGCTTGC 
    AGCCACGGTG GATTAGTTGA AAAAGGGTTA GAGATATATG AGAACATGAA AAAGGATCAT 
    GGGATCGAGC CTAGACTCGA GCATTATGGT TGCATTGTTG ATATGCTTGG TCGTGCTGGG 
    AAATTAGCCG AAGCGGAGAA CTTTATCCTT AAAATGCATG TGAAGCCAAA CGCTCCTATA 
    TTGGGAGCAT TGCTTGGAGC ATGTAAGATT TATAAGAACA CCGAGGTTGC AGAGAGAGTA 
    GGAAACATGT TGATAAAGGT GAAACCAGAA CATAGCGGTT ACTATGTCTT ACTGTCAAAT 
    ATATACGCGT GTGCAGGACA ATGGGATAAG ATAGAGAGCT TGAGAGACAT GATGAAGGAG 
    AAGCTTGTTA AGAAACCACC AGGGTGGAGC TTAATAGAGA TTGATGGGAA AATAAACAAG 
    TTCACAATGG GAGATGATCA GAAGCATCCT GAAATGGGTA AGATCAGAAG GAAGTGGGAA 
    GAGATCTTGG GGAAGATAAG ATTGATAGGG TATAAAGGGA ACACAGGTGA TGCGTTTTTC 
    GATGTAGACG AGGAGGAGAA GGAGAGTTCG ATTCATATGC ATAGTGAGAA ACTTGCAATT 
    GCATATGGTA TGATGAAGAC TAAGCCTGGT ACAACCATTA GGATAGTGAA GAACTTGAGG 
    GTATGTGAAG ATTGTCATAC AGTAACAAAG CTTATCTCTG AGGTTTATGG TAGAGAGTTA 
    ATTGTAAGAG ACCGCAACAG ATTTCATCAT TTTAGAAATG GAGTATGTTC CTGCAGAGAT 
    TATTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_196272.1
    CDS1..1869
    Translation

    Target ORF information:

    RefSeq Version NM_120737.2
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT5G06540), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_120737.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGAGTAACA TTGTGCTCAA CACACTTCGA TTCAAACACC CGAAGCTTGC CTTGCTCCAA 
    TCCTGCTCTT CCTTTTCCGA CCTCAAGATC ATACATGGCT TTCTCTTACG AACCCATCTC 
    ATCTCCGACG TCTTCGTTGC CAGTCGTCTC CTCGCTCTCT GCGTTGACGA CTCCACCTTC 
    AACAAACCAA CCAATCTCTT GGGATATGCA TACGGAATCT TCTCTCAGAT TCAAAACCCT 
    AATCTTTTCG TCTTCAATCT ACTCATTCGC TGCTTCTCCA CTGGTGCAGA GCCTAGTAAG 
    GCTTTTGGGT TCTATACCCA GATGTTGAAA TCTCGGATTT GGCCAGATAA CATCACGTTT 
    CCGTTTCTGA TTAAGGCGTC TAGTGAGATG GAGTGTGTTC TAGTGGGAGA GCAAACGCAT 
    TCACAGATTG TTAGATTCGG ATTTCAGAAT GATGTTTATG TAGAGAATTC GCTTGTTCAT 
    ATGTACGCTA ATTGTGGGTT CATCGCTGCT GCTGGTAGAA TCTTTGGGCA AATGGGGTTT 
    CGAGATGTTG TTTCATGGAC TTCTATGGTG GCTGGGTATT GTAAATGCGG GATGGTTGAG 
    AATGCACGAG AGATGTTCGA TGAAATGCCT CACAGAAATT TGTTTACTTG GAGTATTATG 
    ATTAATGGGT ATGCGAAGAA CAACTGTTTT GAGAAAGCCA TTGACTTGTT TGAATTCATG 
    AAAAGGGAAG GAGTTGTCGC GAATGAGACG GTTATGGTGA GTGTGATTTC GTCTTGTGCT 
    CATTTGGGTG CACTTGAGTT TGGAGAAAGA GCATATGAGT ATGTGGTTAA GAGTCACATG 
    ACTGTGAATC TTATTCTTGG GACAGCTCTT GTGGATATGT TTTGGAGGTG TGGGGATATC 
    GAGAAAGCAA TTCATGTATT TGAGGGATTG CCTGAGACGG ATAGCTTGAG CTGGAGTTCA 
    ATAATCAAAG GTCTTGCAGT GCATGGGCAT GCTCACAAGG CAATGCATTA CTTCTCCCAA 
    ATGATTAGTT TAGGGTTTAT TCCAAGGGAT GTTACATTCA CAGCGGTTCT TTCAGCTTGC 
    AGCCACGGTG GATTAGTTGA AAAAGGGTTA GAGATATATG AGAACATGAA AAAGGATCAT 
    GGGATCGAGC CTAGACTCGA GCATTATGGT TGCATTGTTG ATATGCTTGG TCGTGCTGGG 
    AAATTAGCCG AAGCGGAGAA CTTTATCCTT AAAATGCATG TGAAGCCAAA CGCTCCTATA 
    TTGGGAGCAT TGCTTGGAGC ATGTAAGATT TATAAGAACA CCGAGGTTGC AGAGAGAGTA 
    GGAAACATGT TGATAAAGGT GAAACCAGAA CATAGCGGTT ACTATGTCTT ACTGTCAAAT 
    ATATACGCGT GTGCAGGACA ATGGGATAAG ATAGAGAGCT TGAGAGACAT GATGAAGGAG 
    AAGCTTGTTA AGAAACCACC AGGGTGGAGC TTAATAGAGA TTGATGGGAA AATAAACAAG 
    TTCACAATGG GAGATGATCA GAAGCATCCT GAAATGGGTA AGATCAGAAG GAAGTGGGAA 
    GAGATCTTGG GGAAGATAAG ATTGATAGGG TATAAAGGGA ACACAGGTGA TGCGTTTTTC 
    GATGTAGACG AGGAGGAGAA GGAGAGTTCG ATTCATATGC ATAGTGAGAA ACTTGCAATT 
    GCATATGGTA TGATGAAGAC TAAGCCTGGT ACAACCATTA GGATAGTGAA GAACTTGAGG 
    GTATGTGAAG ATTGTCATAC AGTAACAAAG CTTATCTCTG AGGTTTATGG TAGAGAGTTA 
    ATTGTAAGAG ACCGCAACAG ATTTCATCAT TTTAGAAATG GAGTATGTTC CTGCAGAGAT 
    TATTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
    Nature408(6814)823-6(2000 Dec)
    Tabata S,Kaneko T,Nakamura Y,Kotani H,Kato T,Asamizu E,Miyajima N,Sasamoto S,Kimura T,Hosouchi T,Kawashima K,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Naruo K,Okumura S,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Sato S,de la Bastide M,Huang E,Spiegel L,Gnoj L,O'Shaughnessy A,Preston R,Habermann K,Murray J,Johnson D,Rohlfing T,Nelson J,Stoneking T,Pepin K,Spieth J,Sekhon M,Armstrong J,Becker M,Belter E,Cordum H,Cordes M,Courtney L,Courtney W,Dante M,Du H,Edwards J,Fryman J,Haakensen B,Lamar E,Latreille P,Leonard S,Meyer R,Mulvaney E,Ozersky P,Riley A,Strowmatt C,Wagner-McPherson C,Wollam A,Yoakum M,Bell M,Dedhia N,Parnell L,Shah R,Rodriguez M,See LH,Vil D,Baker J,Kirchoff K,Toth K,King L,Bahret A,Miller B,Marra M,Martienssen R,McCombie WR,Wilson RK,Murphy G,Bancroft I,Volckaert G,Wambutt R,D?sterh?ft A,Stiekema W,Pohl T,Entian KD,Terryn N,Hartley N,Bent E,Johnson S,Langham SA,McCullagh B,Robben J,Grymonprez B,Zimmermann W,Ramsperger U,Wedler H,Balke K,Wedler E,Peters S,van Staveren M,Dirkse W,Mooijman P,Lankhorst RK,Weitzenegger T,Bothe G,Rose M,Hauf J,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Villarroel R,Gielen J,Ardiles W,Bents O,Lemcke K,Kolesov G,Mayer K,Rudd S,Schoof H,Schueller C,Zaccaria P,Mewes HW,Bevan M,Fransz P,,,


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