Gene Symbol | AT5G05550 |
Entrez Gene ID | 830438 |
Full Name | sequence-specific DNA binding transcription factor |
Synonyms | MOP10.9,MOP10_9 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G05550 cDNA ORF clone
Gene Symbol | AT5G05550 |
Entrez Gene ID | 830438 |
Full Name | sequence-specific DNA binding transcription factor |
Synonyms | MOP10.9,MOP10_9 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_180443.2 | NP_850774.1 | sequence-specific DNA binding transcription factor |
NM_001342823.1 | NP_001332681.1 | sequence-specific DNA binding transcription factor |
NM_120637.2 | NP_568158.1 | sequence-specific DNA binding transcription factor |
Oryza sativa (rice) | Os05g0560600 | NP_001056310.1 |
Arabidopsis thaliana (thale cress) | AT5G05550 | NP_568158.1 |
Arabidopsis thaliana (thale cress) | AT3G11100 | NP_566386.1 |
Oryza sativa (rice) | Os01g0674000 | NP_001043837.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
VirF interacts with the VFP3 homolog VFP5 encoded by At5g05550.
Title: Interaction of Arabidopsis Trihelix-Domain Transcription Factors VFP3 and VFP5 with Agrobacterium Virulence Protein VirF.
The following AT5G05550 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G05550 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb17689 | |
Clone ID Related Accession (Same CDS sequence) | NM_180443.2 | |
Accession Version | NM_180443.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sequence-specific DNA binding transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_180443.1. |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850774.1 |
CDS | 411..1160 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180443.2 |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb17690 | |
Clone ID Related Accession (Same CDS sequence) | NM_120637.2 | |
Accession Version | NM_120637.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 741bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sequence-specific DNA binding transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_120637.1. |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_568158.1 |
CDS | 411..1151 |
Translation |
Target ORF information:
Target ORF information:
|
NM_120637.2 |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb40584 | |
Clone ID Related Accession (Same CDS sequence) | NM_001342823.1 | |
Accession Version | NM_001342823.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 747bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sequence-specific DNA binding transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332681.1 |
CDS | 411..1157 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001342823.1 |
1 | ATGGAGACGA CGACGCCGCA GTCAAAATCA AGTGTGTCCC ACCGACCGCC GTTGGGAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |