AT4G37170 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	AT4G37170
Entrez Gene ID	829871
Full Name	Pentatricopeptide repeat (PPR) superfamily protein
Synonyms	AP22.43,AP22_43
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_119880.2	NP_195434.1	Pentatricopeptide repeat (PPR) superfamily protein

Pathways from BioSystems

Homologies

Arabidopsis thaliana (thale cress)	AT4G37170	NP_195434.1
Oryza sativa (rice)	Os03g0235200	NP_001049485.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT4G37170 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G37170 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb17314	NM_119880.2 Latest version!	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G37170), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

AT4G37170 ( NM_119880.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_195434.1 Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G37170), partial mRNA.

Price & Availability↑

CloneID	OAb17314
Clone ID Related Accession (Same CDS sequence)	NM_119880.2
Accession Version	NM_119880.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2076bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Pentatricopeptide repeat (PPR) superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_119880.1. COMPLETENESS: incomplete on the 5' end.

ATGAATCATT CAAATGCGAG AAAGTTAACT ACTCTCCATG GATTTATATT AAAGAGAAAT 
CTATCATCTT TTCACGCCTC ACTGAAGCGG TTTTCAGATA AAAAGTTCTT CAATCCGAAC 
CATGAGGACG GTGGTGTTGT GGTGGAGCGA TTATGTAGAG CTAATAGATT TGGTGAAGCC 
ATTGATGTAT TATGTGGACA GAAGCTCTTA AGAGAAGCTG TTCAACTTCT GGGTCGGGCT 
AAGAAGCCAC CTGCTTCTAC TTATTGCAAT CTCATTCAAG TTTGTAGCCA AACACGTGCT 
CTTGAAGAAG GTAAGAAGGT CCATGAACAC ATTAGGACTT CTGGGTTTGT ACCTGGGATT 
GTTATATGGA ACCGTCTTTT GAGAATGTAT GCGAAATGTG GTAGCTTGGT TGATGCACGG 
AAGGTGTTCG ACGAAATGCC GAATAGAGAT TTGTGTTCGT GGAATGTAAT GGTTAATGGG 
TATGCGGAGG TTGGGTTGCT TGAGGAAGCG AGGAAGTTGT TTGATGAAAT GACTGAAAAA 
GATAGTTATT CGTGGACGGC TATGGTTACG GGTTATGTTA AGAAGGATCA GCCTGAAGAG 
GCATTGGTGT TGTATAGTTT GATGCAACGG GTACCGAATT CAAGACCAAA CATTTTTACA 
GTTTCTATTG CAGTAGCTGC TGCTGCTGCG GTTAAATGTA TCCGTAGAGG GAAAGAGATT 
CATGGGCATA TCGTTCGAGC TGGTTTGGAT TCAGATGAAG TGCTTTGGAG TTCATTGATG 
GATATGTATG GAAAATGTGG CTGTATCGAT GAAGCAAGAA ACATATTTGA TAAGATTGTT 
GAGAAAGATG TTGTCTCGTG GACATCAATG ATAGATAGAT ATTTCAAGTC TAGTAGATGG 
CGGGAAGGGT TTTCTTTGTT TTCCGAGTTG GTAGGTTCTT GTGAACGGCC CAATGAATAC 
ACTTTTGCTG GAGTCTTGAA TGCTTGTGCT GATCTCACAA CAGAAGAGCT AGGGAAGCAA 
GTTCATGGAT ATATGACAAG AGTTGGGTTT GATCCTTACT CTTTTGCATC AAGCTCTCTT 
GTAGATATGT ACACCAAATG TGGAAATATT GAAAGTGCAA AACACGTTGT CGATGGATGT 
CCTAAACCCG ATTTAGTTTC TTGGACTTCT TTGATCGGAG GGTGTGCTCA GAATGGGCAA 
CCTGATGAAG CCTTGAAATA TTTCGACTTG CTCCTCAAAT CCGGCACTAA ACCTGACCAT 
GTTACCTTTG TAAACGTCCT CTCCGCTTGT ACTCATGCCG GATTGGTCGA AAAAGGACTC 
GAATTCTTCT ATTCTATAAC TGAGAAACAC AGGTTATCTC ATACTTCTGA TCATTACACT 
TGTCTTGTTG ATCTTTTAGC TCGGTCTGGA AGATTCGAAC AGTTAAAGAG CGTCATTAGT 
GAAATGCCGA TGAAACCGAG TAAGTTTCTG TGGGCTTCTG TGCTCGGTGG GTGTAGCACT 
TACGGAAACA TTGACCTAGC AGAGGAAGCG GCTCAAGAAC TGTTCAAGAT AGAACCCGAA 
AATCCTGTTA CTTATGTTAC AATGGCTAAC ATCTATGCTG CAGCAGGTAA ATGGGAGGAA 
GAAGGGAAAA TGAGAAAGAG AATGCAAGAA ATCGGAGTCA CCAAAAGGCC TGGTTCAAGC 
TGGACCGAGA TAAAACGGAA GCGTCATGTA TTCATAGCAG CGGATACTTC GCATCCAATG 
TATAACCAAA TAGTTGAGTT CTTGAGGGAA TTGAGGAAGA AGATGAAAGA AGAAGGGTAT 
GTTCCGGCTA CGAGTCTTGT ATTGCACGAT GTAGAAGATG AACAAAAAGA AGAGAATCTT 
GTGTATCATA GCGAGAAACT TGCTGTTGCA TTTGCAATTC TATCGACAGA AGAAGGAACG 
GCGATTAAGG TGTTTAAGAA CTTGAGGTCT TGTGTGGATT GTCACGGTGC TATTAAGTTC 
ATATCGAACA TCACAAAGAG GAAGATAACC GTAAGGGACT CTACTCGGTT TCATTGCTTT 
GAGAATGGAC AATGTTCTTG TGGAGATTAT TGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_195434.1
CDS	1..2076
Translation	MNHSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW

Target ORF information:

RefSeq Version	NM_119880.2
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G37170), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_119880.2

ORF Insert Sequence:

ATGAATCATT CAAATGCGAG AAAGTTAACT ACTCTCCATG GATTTATATT AAAGAGAAAT 
CTATCATCTT TTCACGCCTC ACTGAAGCGG TTTTCAGATA AAAAGTTCTT CAATCCGAAC 
CATGAGGACG GTGGTGTTGT GGTGGAGCGA TTATGTAGAG CTAATAGATT TGGTGAAGCC 
ATTGATGTAT TATGTGGACA GAAGCTCTTA AGAGAAGCTG TTCAACTTCT GGGTCGGGCT 
AAGAAGCCAC CTGCTTCTAC TTATTGCAAT CTCATTCAAG TTTGTAGCCA AACACGTGCT 
CTTGAAGAAG GTAAGAAGGT CCATGAACAC ATTAGGACTT CTGGGTTTGT ACCTGGGATT 
GTTATATGGA ACCGTCTTTT GAGAATGTAT GCGAAATGTG GTAGCTTGGT TGATGCACGG 
AAGGTGTTCG ACGAAATGCC GAATAGAGAT TTGTGTTCGT GGAATGTAAT GGTTAATGGG 
TATGCGGAGG TTGGGTTGCT TGAGGAAGCG AGGAAGTTGT TTGATGAAAT GACTGAAAAA 
GATAGTTATT CGTGGACGGC TATGGTTACG GGTTATGTTA AGAAGGATCA GCCTGAAGAG 
GCATTGGTGT TGTATAGTTT GATGCAACGG GTACCGAATT CAAGACCAAA CATTTTTACA 
GTTTCTATTG CAGTAGCTGC TGCTGCTGCG GTTAAATGTA TCCGTAGAGG GAAAGAGATT 
CATGGGCATA TCGTTCGAGC TGGTTTGGAT TCAGATGAAG TGCTTTGGAG TTCATTGATG 
GATATGTATG GAAAATGTGG CTGTATCGAT GAAGCAAGAA ACATATTTGA TAAGATTGTT 
GAGAAAGATG TTGTCTCGTG GACATCAATG ATAGATAGAT ATTTCAAGTC TAGTAGATGG 
CGGGAAGGGT TTTCTTTGTT TTCCGAGTTG GTAGGTTCTT GTGAACGGCC CAATGAATAC 
ACTTTTGCTG GAGTCTTGAA TGCTTGTGCT GATCTCACAA CAGAAGAGCT AGGGAAGCAA 
GTTCATGGAT ATATGACAAG AGTTGGGTTT GATCCTTACT CTTTTGCATC AAGCTCTCTT 
GTAGATATGT ACACCAAATG TGGAAATATT GAAAGTGCAA AACACGTTGT CGATGGATGT 
CCTAAACCCG ATTTAGTTTC TTGGACTTCT TTGATCGGAG GGTGTGCTCA GAATGGGCAA 
CCTGATGAAG CCTTGAAATA TTTCGACTTG CTCCTCAAAT CCGGCACTAA ACCTGACCAT 
GTTACCTTTG TAAACGTCCT CTCCGCTTGT ACTCATGCCG GATTGGTCGA AAAAGGACTC 
GAATTCTTCT ATTCTATAAC TGAGAAACAC AGGTTATCTC ATACTTCTGA TCATTACACT 
TGTCTTGTTG ATCTTTTAGC TCGGTCTGGA AGATTCGAAC AGTTAAAGAG CGTCATTAGT 
GAAATGCCGA TGAAACCGAG TAAGTTTCTG TGGGCTTCTG TGCTCGGTGG GTGTAGCACT 
TACGGAAACA TTGACCTAGC AGAGGAAGCG GCTCAAGAAC TGTTCAAGAT AGAACCCGAA 
AATCCTGTTA CTTATGTTAC AATGGCTAAC ATCTATGCTG CAGCAGGTAA ATGGGAGGAA 
GAAGGGAAAA TGAGAAAGAG AATGCAAGAA ATCGGAGTCA CCAAAAGGCC TGGTTCAAGC 
TGGACCGAGA TAAAACGGAA GCGTCATGTA TTCATAGCAG CGGATACTTC GCATCCAATG 
TATAACCAAA TAGTTGAGTT CTTGAGGGAA TTGAGGAAGA AGATGAAAGA AGAAGGGTAT 
GTTCCGGCTA CGAGTCTTGT ATTGCACGAT GTAGAAGATG AACAAAAAGA AGAGAATCTT 
GTGTATCATA GCGAGAAACT TGCTGTTGCA TTTGCAATTC TATCGACAGA AGAAGGAACG 
GCGATTAAGG TGTTTAAGAA CTTGAGGTCT TGTGTGGATT GTCACGGTGC TATTAAGTTC 
ATATCGAACA TCACAAAGAG GAAGATAACC GTAAGGGACT CTACTCGGTT TCATTGCTTT 
GAGAATGGAC AATGTTCTTG TGGAGATTAT TGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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AT4G37170 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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