Gene Symbol | AT3G48900 |
Entrez Gene ID | 824051 |
Full Name | single-stranded DNA endonuclease family protein |
Synonyms | AtSEND1,SEND1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT3G48900 cDNA ORF clone
Gene Symbol | AT3G48900 |
Entrez Gene ID | 824051 |
Full Name | single-stranded DNA endonuclease family protein |
Synonyms | AtSEND1,SEND1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_114749.3 | NP_190459.2 | single-stranded DNA endonuclease family protein |
NM_001339388.1 | NP_001325691.1 | single-stranded DNA endonuclease family protein |
NM_001125323.2 | NP_001118795.1 | single-stranded DNA endonuclease family protein |
Arabidopsis thaliana (thale cress) | AT3G48900 | NP_001118795.1 |
Xenopus tropicalis (tropical clawed frog) | gen1 | NP_001120251.1 |
Oryza sativa (rice) | Os08g0101600 | NP_001060762.1 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SEND1 has at most a minor role in resolution of the Holliday junction but acts as an essential backup to MUS81 for resolution of toxic replication structures to ensure genome stability and to maintain telomere integrity.
Title: The Structure-Specific Endonucleases MUS81 and SEND1 Are Essential for Telomere Stability in Arabidopsis.
resolvase activity involves resolving holliday junctions by symmetrically oriented incisions in two opposing strands
Title: AtGEN1 and AtSEND1, two paralogs in Arabidopsis, possess holliday junction resolvase activity.
The following AT3G48900 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT3G48900 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb06518 | |
Clone ID Related Accession (Same CDS sequence) | NM_001125323.2 | |
Accession Version | NM_001125323.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1803bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | single-stranded DNA endonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_001125323.1. |
1 | ATGGGAGTGA AGTATCTTTG GGATGTCTTG GAGCCTTGTA AGAAGACTTT CCCACTCGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001118795.1 |
CDS | 47..1849 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001125323.2 |
1 | ATGGGAGTGA AGTATCTTTG GGATGTCTTG GAGCCTTGTA AGAAGACTTT CCCACTCGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb06519 | |
Clone ID Related Accession (Same CDS sequence) | NM_114749.3 | |
Accession Version | NM_114749.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | single-stranded DNA endonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_114749.2. |
1 | ATGATGTCAA ATGTGGCACT TGTGGTTTCA TCCTTGCATA TGATGGCTAG TTTTTGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_190459.2 |
CDS | 331..1941 |
Translation |
Target ORF information:
Target ORF information:
|
NM_114749.3 |
1 | ATGATGTCAA ATGTGGCACT TGTGGTTTCA TCCTTGCATA TGATGGCTAG TTTTTGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb38168 | |
Clone ID Related Accession (Same CDS sequence) | NM_001339388.1 | |
Accession Version | NM_001339388.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1629bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | single-stranded DNA endonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). |
1 | ATGATGTCAA ATGTGGCACT TGTGGTTTCA TCCTTGCATA TGATGGCTAG TTTTTGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001325691.1 |
CDS | 323..1951 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001339388.1 |
1 | ATGATGTCAA ATGTGGCACT TGTGGTTTCA TCCTTGCATA TGATGGCTAG TTTTTGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |