Gene Symbol | HDA9 |
Entrez Gene ID | 823594 |
Full Name | histone deacetylase 9 |
Synonyms | AtHDA9,HDA09,HISTONE DEACETYLASE,histone deacetylase 9 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » HDA9 cDNA ORF clone
Gene Symbol | HDA9 |
Entrez Gene ID | 823594 |
Full Name | histone deacetylase 9 |
Synonyms | AtHDA9,HDA09,HISTONE DEACETYLASE,histone deacetylase 9 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_114336.4 | NP_190054.2 | histone deacetylase 9 |
Oryza sativa (rice) | Os04g0409600 | NP_001052725.1 |
Xenopus tropicalis (tropical clawed frog) | hdac3 | NP_001016883.1 |
HDAC3 | XP_001094295.1 | |
Canis lupus familiaris (dog) | HDAC3 | XP_535219.2 |
Homo sapiens (human) | HDAC3 | NP_003874.2 |
Gallus gallus (chicken) | HDAC3 | NP_990078.1 |
Bos taurus (cattle) | HDAC3 | NP_001193172.1 |
Mus musculus (house mouse) | Hdac3 | NP_034541.2 |
Drosophila melanogaster (fruit fly) | Hdac3 | NP_651978.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001143 | XP_322018.5 |
Arabidopsis thaliana (thale cress) | HDA9 | NP_190054.2 |
Pan troglodytes (chimpanzee) | HDAC3 | XP_001151495.1 |
Rattus norvegicus (Norway rat) | Hdac3 | NP_445900.1 |
Danio rerio (zebrafish) | hdac3 | NP_957284.1 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The authors found that HDA9 acts in complex with a SANT domain-containing protein POWERDRESS (PWR) and transcription factor WRKY53. Genome-wide profiling of HDA9 occupancy reveals that HDA9 directly binds to the promoters of key negative regulators of senescence and this association requires PWR.
Title: POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in
HDA9 might be a novel chromatin protein that negatively regulates plant sensitivity to salt and drought stresses.
Title: Histone deacetylase HDA9 negatively regulates salt and drought stress responsiveness in Arabidopsis.
HDA9 prevents precocious flowering under SD conditions by curbing the hyperactivation of AGL19, an upstream activator of FT, through resetting the local chromatin environment.
Title: Repression of flowering under a noninductive photoperiod by the HDA9-AGL19-FT module in Arabidopsis.
HDA9 negatively influences germination and is involved in the suppression of seedling traits in dry seeds, probably by transcriptional repression via histone deacetylation.
Title: HISTONE DEACETYLASE 9 represses seedling traits in Arabidopsis thaliana dry seeds.
The data indicate thatHDA9 represses flowering by repressing AGL19 gene expressionindependently of CONSTANS or FLC pathways.
Title: Arabidopsis histone deacetylase HDA9 regulates flowering time through repression of AGL19.
The following HDA9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HDA9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb12826 | |
Clone ID Related Accession (Same CDS sequence) | NM_114336.4 | |
Accession Version | NM_114336.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1281bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | histone deacetylase 9 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_114336.3. |
1 | ATGCGTTCCA AGGACAAAAT CTCTTACTTT TATGATGGGG ATGTGGGGAG TGTCTATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_190054.2 |
CDS | 258..1538 |
Translation |
Target ORF information:
Target ORF information:
|
NM_114336.4 |
1 | ATGCGTTCCA AGGACAAAAT CTCTTACTTT TATGATGGGG ATGTGGGGAG TGTCTATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |