CIITA cDNA ORF clone, Anas platyrhynchos(mallard)

The following CIITA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CIITA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAn118732 XM_013106875.1
Latest version!
Anas platyrhynchos class II, major histocompatibility complex, transactivator (CIITA), mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $713.30
$1019.00
OAn154572 XM_021277534.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $713.30
$1019.00
OAn166452 XM_027469340.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
OAn166453 XM_021277534.2
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
OAn166454 XM_027469341.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
OAn166455 XM_027469342.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
OAn166456 XM_027469343.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
OAn166457 XM_027469344.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X6, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00
OAn166458 XM_027469347.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X9, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00
OAn166458 XM_027469346.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X8, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00
OAn166458 XM_027469345.1
Latest version!
Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X7, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OAn118732
    Clone ID Related Accession (Same CDS sequence) XM_013106875.1
    Accession Version XM_013106875.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3654bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-07-08
    Organism Anas platyrhynchos(Mallard)
    Product LOW QUALITY PROTEIN: MHC class II transactivator
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004678113.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Anas platyrhynchos Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCT CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGCTTAGAA
    ATATTCAAAG AAGTCCAAGT TCCTCTAATT CCTTCTGAAG AACTTTTCAA AAGACCAAGG
    TCAGTGGAAG TCTTCTGTAG AGCACTTAAG GATTACTTCG GAGACATATG CAAATATGTG
    GCCATGGAGC GTGAAGTGAC TCTTGATCAC TTGTTTATTG ATGGTACACT TGTGCAAAAC
    CAAATTGAAA CCAAGACTGG AAAGCACAGT GTAAAAGCAA TGGAAAAGGA GCTGGTAACT
    TACAATCTAC AATGGAAGGA AAAGGCATCA CTTGAAAGAA GCCAAATATT TCAAATCCCA
    GGAGGTAAAG ATTTAGAGAC TAAAGTGATT GTGGTGCTGG GAAAAGCAGG AATGGGCAAA
    AGCATTCTTG TACAGAAGAT CTGTCAGGAC TGGTCCAATG GAGAGTTTCC TCAGTTTGAA
    TTTCTCTTTT GGTTTGACTG CAAACAAATA AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG
    GATCTGCTTC TTGATTTTTT TGTAAAACCT CAAGAGGGAA GCAACGAAAT CTTTGAGTAC
    ATATTGCAAA ATCCTGCTAA AGTCCTTCTG GTTTTTGATG GTTTTGAAGG GTTGCATGAC
    CATGAGAATT TTCCTCGTTG CTCAGACAGA CAGCCTGACA GAGGCTTGTA CAATATAAAG
    GAGCTGCTTT CAGGACTTAT CCAAAAAAAA ATATTCAGTT TCAGTGGCTG TACTTTATTA
    CTTACAGGAA GACCAAAAGA CAAGGTGAAC CAGTATGTGT CCAAAGTGGA TAAGACTATT
    GAAATAGTAG GATTCTCTCC TCAGCAGAGA GAATTGTACA TAACCAAATA CTTTGAAGGA
    TTACCCTACT GTGATAATGC ACTGAAATTA ATCAAAGAGA GTGAGTACCT GTTCAGTCAT
    TGTTACAGCC CTGTTATATG TAGATTTGTT TGTTTTCTCT GTGAGACAGT ACTTGAAATG
    GGAGACAAAG GCCTTCCTTC AACTCTTACT ACACTTTTCC TGAAATTTGT TCAGCAAAAG
    ATAATACCTA TGCAAACAGA TGTTACAGCT GTGCAAAATC AAAAGTGCCT TGCTACACTA
    GCCCGTATAG CCTGGTATCT TGGAGAAAAG CACCAAAGTA CCATGAAAAG TGATATTATT
    CCTTCTAAGG AACTTAAAGA ATTTGCTCTG AAATACGGAT TTTTCCTGCC ATTTGCATTC
    CCCAAACATT CAGATACTGA GGAGGAGGAA CTTGGGACCA CATTCTCCGA TTTTGTCATT
    CAGAATTTCT TGGGTGCGCT TCACCTTGTA TTAGCAGAAG ACGTGAAGGA TAAAAGTCTA
    ACAAAGTACC TGTCTTTTCC ATCCAAGAAG AAAAAGCCTT ATAACTGGTT AGACTTAGTG
    CCTCGATTTT TGGCTGGATT GTTGTTCCTC CAGGATGATG CCTACTTCTG CTCCCTTTCT
    AATAAGGAAA TAAAACAATC AACCAAGAAG CAGAAAACAC TCCTGAAATA TGTTAGAAGG
    TTGCAGATAA ATGACCTCTG TCCAGAGAGG TTACTTGAGC TTTTACACTG CATATATGAA
    ACACAATACA ATTATCTGTT GCAGCATGTG ACCTTAAGGC TCAAGACAGA CCTGTCTTTT
    CATGGCATTT TTATTACACC ACCAGATGTT CATGTACTCT ACTCTACTTT AAAAAGGTCA
    AGAAAAGAGT TTTCCTTGGA TTTGCAAAAC AGCAACATTG ACATGCAGGG GCTAAAAGAC
    TTGGTTGGCC TGAAGAATGT GGCATCATTC AGGGCCTCCC TTGGTGATAC AATCAGGCTA
    TGGAAATACT TAGAACAGAC AAAAGACTAT GAACTGCTGA AACTGTCAAC AGAAAAATTT
    GTTCTCGATC CCTTTAAGGC AAAGACAATG AAGGATATCA GTGACCTTTC AGACCTTGTA
    GAAATGCAGG AGATGATCAG TTGCATGCAA GATGCCTCTG GTTGCAGCAG CTATGAAATT
    CCTGCTATAA AGAACCTGAG AAAAATAGAA TTTGCTCTAG GTCCAGCATA TGGCCTTCAG
    GGATTTCTAA AACTTGTGGA AATTCTGCCG TCATTTCCAT CACTTCAGCA TTTAGACCTT
    GATGCTCTAA GTGAAAATGG CATAGGAGAT GAAGGAGCAA AGAGTCTATC TGAAGTCTTT
    CCAACACTGA GATCACTGGA AATATTGAAC TTATCACAGA ATAAGATAAC AGATGTGGGT
    GCAGAGAAAC TAGCTACAAC TCTTCCTGCC TTATCTTCAT TAACAACACT AAGCTTGTAC
    AATAATAACA TTTGTGATTT TGGAGCAGAA AATCTTGCAA AAGTTCTTCA TGCGATGGCA
    TCTTTAAGAG TGCTAGATGT TCAGTATAAC AAAATAACTG GTGTTGGAGC CCAACAGCTG
    ACTGACAGCC TACGAAAATG CCCCCATATA AAAAACTTGT TGATATGGAA TCCTACAATT
    CCTTATGGAG TTCTTGAACA CCTTCAGCAG CTGGACTCGA GGATCAGTGT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012962329.1
    CDS49..3702
    Translation

    Target ORF information:

    RefSeq Version XM_013106875.1
    Organism Anas platyrhynchos(Mallard)
    Definition Anas platyrhynchos class II, major histocompatibility complex, transactivator (CIITA), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_013106875.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCT CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGCTTAGAA
    ATATTCAAAG AAGTCCAAGT TCCTCTAATT CCTTCTGAAG AACTTTTCAA AAGACCAAGG
    TCAGTGGAAG TCTTCTGTAG AGCACTTAAG GATTACTTCG GAGACATATG CAAATATGTG
    GCCATGGAGC GTGAAGTGAC TCTTGATCAC TTGTTTATTG ATGGTACACT TGTGCAAAAC
    CAAATTGAAA CCAAGACTGG AAAGCACAGT GTAAAAGCAA TGGAAAAGGA GCTGGTAACT
    TACAATCTAC AATGGAAGGA AAAGGCATCA CTTGAAAGAA GCCAAATATT TCAAATCCCA
    GGAGGTAAAG ATTTAGAGAC TAAAGTGATT GTGGTGCTGG GAAAAGCAGG AATGGGCAAA
    AGCATTCTTG TACAGAAGAT CTGTCAGGAC TGGTCCAATG GAGAGTTTCC TCAGTTTGAA
    TTTCTCTTTT GGTTTGACTG CAAACAAATA AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG
    GATCTGCTTC TTGATTTTTT TGTAAAACCT CAAGAGGGAA GCAACGAAAT CTTTGAGTAC
    ATATTGCAAA ATCCTGCTAA AGTCCTTCTG GTTTTTGATG GTTTTGAAGG GTTGCATGAC
    CATGAGAATT TTCCTCGTTG CTCAGACAGA CAGCCTGACA GAGGCTTGTA CAATATAAAG
    GAGCTGCTTT CAGGACTTAT CCAAAAAAAA ATATTCAGTT TCAGTGGCTG TACTTTATTA
    CTTACAGGAA GACCAAAAGA CAAGGTGAAC CAGTATGTGT CCAAAGTGGA TAAGACTATT
    GAAATAGTAG GATTCTCTCC TCAGCAGAGA GAATTGTACA TAACCAAATA CTTTGAAGGA
    TTACCCTACT GTGATAATGC ACTGAAATTA ATCAAAGAGA GTGAGTACCT GTTCAGTCAT
    TGTTACAGCC CTGTTATATG TAGATTTGTT TGTTTTCTCT GTGAGACAGT ACTTGAAATG
    GGAGACAAAG GCCTTCCTTC AACTCTTACT ACACTTTTCC TGAAATTTGT TCAGCAAAAG
    ATAATACCTA TGCAAACAGA TGTTACAGCT GTGCAAAATC AAAAGTGCCT TGCTACACTA
    GCCCGTATAG CCTGGTATCT TGGAGAAAAG CACCAAAGTA CCATGAAAAG TGATATTATT
    CCTTCTAAGG AACTTAAAGA ATTTGCTCTG AAATACGGAT TTTTCCTGCC ATTTGCATTC
    CCCAAACATT CAGATACTGA GGAGGAGGAA CTTGGGACCA CATTCTCCGA TTTTGTCATT
    CAGAATTTCT TGGGTGCGCT TCACCTTGTA TTAGCAGAAG ACGTGAAGGA TAAAAGTCTA
    ACAAAGTACC TGTCTTTTCC ATCCAAGAAG AAAAAGCCTT ATAACTGGTT AGACTTAGTG
    CCTCGATTTT TGGCTGGATT GTTGTTCCTC CAGGATGATG CCTACTTCTG CTCCCTTTCT
    AATAAGGAAA TAAAACAATC AACCAAGAAG CAGAAAACAC TCCTGAAATA TGTTAGAAGG
    TTGCAGATAA ATGACCTCTG TCCAGAGAGG TTACTTGAGC TTTTACACTG CATATATGAA
    ACACAATACA ATTATCTGTT GCAGCATGTG ACCTTAAGGC TCAAGACAGA CCTGTCTTTT
    CATGGCATTT TTATTACACC ACCAGATGTT CATGTACTCT ACTCTACTTT AAAAAGGTCA
    AGAAAAGAGT TTTCCTTGGA TTTGCAAAAC AGCAACATTG ACATGCAGGG GCTAAAAGAC
    TTGGTTGGCC TGAAGAATGT GGCATCATTC AGGGCCTCCC TTGGTGATAC AATCAGGCTA
    TGGAAATACT TAGAACAGAC AAAAGACTAT GAACTGCTGA AACTGTCAAC AGAAAAATTT
    GTTCTCGATC CCTTTAAGGC AAAGACAATG AAGGATATCA GTGACCTTTC AGACCTTGTA
    GAAATGCAGG AGATGATCAG TTGCATGCAA GATGCCTCTG GTTGCAGCAG CTATGAAATT
    CCTGCTATAA AGAACCTGAG AAAAATAGAA TTTGCTCTAG GTCCAGCATA TGGCCTTCAG
    GGATTTCTAA AACTTGTGGA AATTCTGCCG TCATTTCCAT CACTTCAGCA TTTAGACCTT
    GATGCTCTAA GTGAAAATGG CATAGGAGAT GAAGGAGCAA AGAGTCTATC TGAAGTCTTT
    CCAACACTGA GATCACTGGA AATATTGAAC TTATCACAGA ATAAGATAAC AGATGTGGGT
    GCAGAGAAAC TAGCTACAAC TCTTCCTGCC TTATCTTCAT TAACAACACT AAGCTTGTAC
    AATAATAACA TTTGTGATTT TGGAGCAGAA AATCTTGCAA AAGTTCTTCA TGCGATGGCA
    TCTTTAAGAG TGCTAGATGT TCAGTATAAC AAAATAACTG GTGTTGGAGC CCAACAGCTG
    ACTGACAGCC TACGAAAATG CCCCCATATA AAAAACTTGT TGATATGGAA TCCTACAATT
    CCTTATGGAG TTCTTGAACA CCTTCAGCAG CTGGACTCGA GGATCAGTGT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn154572
    Clone ID Related Accession (Same CDS sequence) XM_021277534.1
    Accession Version XM_021277534.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3648bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-05-23
    Organism Anas platyrhynchos(mallard)
    Product LOW QUALITY PROTEIN: MHC class II transactivator
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004678113.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Anas platyrhynchos Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCT CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGGA TCTTCAGCAC CTTTGATTCC AGAGTGTCTA
    CCCTTTGGCA TGAAAGACAA ACAAGAGAAT GTAGACTTTG CAGATCTTGC TCAGCAGAAA
    AATAATTTTT TAATAGGAAA TGGCACATCA AGTATTATAA CATATCCAGC ACTGACTACC
    TCCACTGAAA CAATGTTTTC CCCGAGTTTT CCAGTTAATG TATGTGGCTT AGAAATATTC
    AAAGAAGTCC AAGTTCCTCT AATTCCTTCT GAAGAACTTT TCAAAAGACC AAGGTCAGTG
    GAAGTCTTCT GTAGAGCACT TAAGGATTAC TTCGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCTGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTG AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAGAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTTTCAGTG GCTGTACTTT ATTACTTACA
    GGAAGACCAA AAGACAAGGT GAACCAGTAT GTGTCCAAAG TGGATAAGAC TATTGAAATA
    GTAGGATTCT CTCCTCAGCA GAGAGAATTG TACATAACCA AATACTTTGA AGGATTACCC
    TACTGTGATA ATGCACTGAA ATTAATCAAA GAGAGTGAGT ACCTGTTCAG TCATTGTTAC
    AGCCCTGTTA TATGTAGATT TGTTTGTTTT CTCTGTGAGA CAGTACTTGA AATGGGAGAC
    AAAGGCCTTC CTTCAACTCT TACTACACTT TTCCTGAAAT TTGTTCAGCA AAAGATAATA
    CCTATGCAAA CAGATGTTAC AGCTGTGCAA AATCAAAAGT GCCTTGCTAC ACTAGCCCGT
    ATAGCCTGGT ATCTTGGAGA AAAGCACCAA AGTACCATGA AAAGTGATAT TATTCCTTCT
    AAGGAACTTA AAGAATTTGC TCTGAAATAC GGATTTTTCC TGCCATTTGC ATTCCCCAAA
    CATTCAGATA CTGAGGAGGA GGAACTTGGG ACCACATTCT CCGATTTTGT CATTCAGAAT
    TTCTTGGGTG CGCTTCACCT TGTATTAGCA GAAGACGTGA AGGATAAAAG TCTAACAAAG
    TACCTGTCTT TTCCATCCAA GAAGAAAAAG CCTTATAACT GGTTAGACTT AGTGCCTCGA
    TTTTTGGCTG GATTGTTGTT CCTCCAGGAT GATGCCTACT TCTGCTCCCT TTCTAATAAG
    GAAATAAAAC AATCAACCAA GAAGCAGAAA ACACTCCTGA AATATGTTAG AAGGTTGCAG
    ATAAATGACC TCTGTCCAGA GAGGTTACTT GAGCTTTTAC ACTGCATATA TGAAACACAA
    TACAATTATC TGTTGCAGCA TGTGACCTTA AGGCTCAAGA CAGACCTGTC TTTTCATGGC
    ATTTTTATTA CACCACCAGA TGTTCATGTA CTCTACTCTA CTTTAAAAAG GTCAAGAAAA
    GAGTTTTCCT TGGATTTGCA AAACAGCAAC ATTGACATGC AGGGGCTAAA AGACTTGGTT
    GGCCTGAAGA ATGTGGCATC ATTCAGGGCC TCCCTTGGTG ATACAATCAG GCTATGGAAA
    TACTTAGAAC AGACAAAAGA CTATGAACTG CTGAAACTGT CAACAGAAAA ATTTGTTCTC
    GATCCCTTTA AGGCAAAGAC AATGAAGGAT ATCAGTGACC TTTCAGACCT TGTAGAAATG
    CAGGAGATGA TCAGTTGCAT GCAAGATGCC TCTGGTTGCA GCAGCTATGA AATTCCTGCT
    ATAAAGAACC TGAGAAAAAT AGAATTTGCT CTAGGTCCAG CATATGGCCT TCAGGGATTT
    CTAAAACTTG TGGAAATTCT GCCGTCATTT CCATCACTTC AGCATTTAGA CCTTGATGCT
    CTAAGTGAAA ATGGCATAGG AGATGAAGGA GCAAAGAGTC TATCTGAAGT CTTTCCAACA
    CTGAGATCAC TGGAAATATT GAACTTATCA CAGAATAAGA TAACAGATGT GGGTGCAGAG
    AAACTAGCTA CAACTCTTCC TGCCTTATCT TCATTAACAA CACTAAGCTT GTACAATAAT
    AACATTTGTG ATTTTGGAGC AGAAAATCTT GCAAAAGTTC TTCATGCGAT GGCATCTTTA
    AGAGTGCTAG ATGTTCAGTA TAACAAAATA ACTGGTGTTG GAGCCCAACA GCTGACTGAC
    AGCCTACGAA AATGCCCCCA TATAAAAAAC TTGTTGATAT GGAATCCTAC AATTCCTTAT
    GGAGTTCTTG AACACCTTCA GCAGCTGGAC TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021133209.1
    CDS52..3699
    Translation

    Target ORF information:

    RefSeq Version XM_021277534.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_021277534.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCT CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGGA TCTTCAGCAC CTTTGATTCC AGAGTGTCTA
    CCCTTTGGCA TGAAAGACAA ACAAGAGAAT GTAGACTTTG CAGATCTTGC TCAGCAGAAA
    AATAATTTTT TAATAGGAAA TGGCACATCA AGTATTATAA CATATCCAGC ACTGACTACC
    TCCACTGAAA CAATGTTTTC CCCGAGTTTT CCAGTTAATG TATGTGGCTT AGAAATATTC
    AAAGAAGTCC AAGTTCCTCT AATTCCTTCT GAAGAACTTT TCAAAAGACC AAGGTCAGTG
    GAAGTCTTCT GTAGAGCACT TAAGGATTAC TTCGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCTGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTG AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAGAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTTTCAGTG GCTGTACTTT ATTACTTACA
    GGAAGACCAA AAGACAAGGT GAACCAGTAT GTGTCCAAAG TGGATAAGAC TATTGAAATA
    GTAGGATTCT CTCCTCAGCA GAGAGAATTG TACATAACCA AATACTTTGA AGGATTACCC
    TACTGTGATA ATGCACTGAA ATTAATCAAA GAGAGTGAGT ACCTGTTCAG TCATTGTTAC
    AGCCCTGTTA TATGTAGATT TGTTTGTTTT CTCTGTGAGA CAGTACTTGA AATGGGAGAC
    AAAGGCCTTC CTTCAACTCT TACTACACTT TTCCTGAAAT TTGTTCAGCA AAAGATAATA
    CCTATGCAAA CAGATGTTAC AGCTGTGCAA AATCAAAAGT GCCTTGCTAC ACTAGCCCGT
    ATAGCCTGGT ATCTTGGAGA AAAGCACCAA AGTACCATGA AAAGTGATAT TATTCCTTCT
    AAGGAACTTA AAGAATTTGC TCTGAAATAC GGATTTTTCC TGCCATTTGC ATTCCCCAAA
    CATTCAGATA CTGAGGAGGA GGAACTTGGG ACCACATTCT CCGATTTTGT CATTCAGAAT
    TTCTTGGGTG CGCTTCACCT TGTATTAGCA GAAGACGTGA AGGATAAAAG TCTAACAAAG
    TACCTGTCTT TTCCATCCAA GAAGAAAAAG CCTTATAACT GGTTAGACTT AGTGCCTCGA
    TTTTTGGCTG GATTGTTGTT CCTCCAGGAT GATGCCTACT TCTGCTCCCT TTCTAATAAG
    GAAATAAAAC AATCAACCAA GAAGCAGAAA ACACTCCTGA AATATGTTAG AAGGTTGCAG
    ATAAATGACC TCTGTCCAGA GAGGTTACTT GAGCTTTTAC ACTGCATATA TGAAACACAA
    TACAATTATC TGTTGCAGCA TGTGACCTTA AGGCTCAAGA CAGACCTGTC TTTTCATGGC
    ATTTTTATTA CACCACCAGA TGTTCATGTA CTCTACTCTA CTTTAAAAAG GTCAAGAAAA
    GAGTTTTCCT TGGATTTGCA AAACAGCAAC ATTGACATGC AGGGGCTAAA AGACTTGGTT
    GGCCTGAAGA ATGTGGCATC ATTCAGGGCC TCCCTTGGTG ATACAATCAG GCTATGGAAA
    TACTTAGAAC AGACAAAAGA CTATGAACTG CTGAAACTGT CAACAGAAAA ATTTGTTCTC
    GATCCCTTTA AGGCAAAGAC AATGAAGGAT ATCAGTGACC TTTCAGACCT TGTAGAAATG
    CAGGAGATGA TCAGTTGCAT GCAAGATGCC TCTGGTTGCA GCAGCTATGA AATTCCTGCT
    ATAAAGAACC TGAGAAAAAT AGAATTTGCT CTAGGTCCAG CATATGGCCT TCAGGGATTT
    CTAAAACTTG TGGAAATTCT GCCGTCATTT CCATCACTTC AGCATTTAGA CCTTGATGCT
    CTAAGTGAAA ATGGCATAGG AGATGAAGGA GCAAAGAGTC TATCTGAAGT CTTTCCAACA
    CTGAGATCAC TGGAAATATT GAACTTATCA CAGAATAAGA TAACAGATGT GGGTGCAGAG
    AAACTAGCTA CAACTCTTCC TGCCTTATCT TCATTAACAA CACTAAGCTT GTACAATAAT
    AACATTTGTG ATTTTGGAGC AGAAAATCTT GCAAAAGTTC TTCATGCGAT GGCATCTTTA
    AGAGTGCTAG ATGTTCAGTA TAACAAAATA ACTGGTGTTG GAGCCCAACA GCTGACTGAC
    AGCCTACGAA AATGCCCCCA TATAAAAAAC TTGTTGATAT GGAATCCTAC AATTCCTTAT
    GGAGTTCTTG AACACCTTCA GCAGCTGGAC TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166452
    Clone ID Related Accession (Same CDS sequence) XM_027469340.1
    Accession Version XM_027469340.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3648bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGCTTAGAA
    ATATTCAAAG AAGTCCAAGT TCCTCTAATT CCTTCTGAAG AACTTTTCAA AAGACCAAGG
    TCAGTGGAAG TCTTCTGTAG AGCGCTTAAG GATTACTTTG GAGACATATG CAAATATGTG
    GCCATGGAGC GTGAAGTGAC TCTTGATCAC TTGTTTATTG ATGGTACACT TGTGCAAAAC
    CAAATTGAAA CCAAGACTGG AAAGCACAGT GTAAAAGCAA TGGAAAAGGA GCCGGTAACT
    TACAATCTAC AATGGAAGGA AAAGGCATCA CTTGAAAGAA GCCAAATATT TCAAATCCCA
    GGAGGTAAAG ATTTAGAGAC TAAAGTGATT GTGGTGCTGG GAAAAGCAGG AATGGGCAAA
    AGCATTCTTG TACAGAAGAT CTGTCAGGAC TGGTCCAATG GAGAGTTTCC TCAGTTTGAA
    TTTCTCTTTT GGTTTGACTG CAAACAAATA AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG
    GATCTGCTTC TTGATTTTTT TGTAAAACCT CAAGAGGGAA GCAACGAAAT CTTTGAGTAC
    ATATTGCAAA ATCCTGCTAA AGTCCTTCTG GTTTTTGATG GTTTTCAAGG GTTGCATGAC
    CATGAGAATT TTCCTCGTTG CTCAGACAGA CAGCCTGACA AAGGCTTGTA CAATATAAAG
    GAGCTGCTTT CAGGACTTAT CCAAAAAAAA ATATTCAGTG GCTGTACTTT ATTACTTACA
    GGAAGACCAA AAGACAAGGT GAACCAGTAT GTGTCCAAAG TGGATAAGAC TATTGAAATA
    GTAGGATTCT CTCCTCAGCA GAGAGAATTG TACATAACCA AATACTTTGA AGGATTACCC
    TACTGTGATA ATGCACTGAA ATTAATCAAA GAGAGTGAGT ACCTGTTCAG TCATTGTTAC
    AGCCCTGTTA TATGTAGATT TGTTTGTTTT CTCTGTGAGA CAGTACTTGA AATGGGAGAC
    AAAGGCCTTC CTTCAACTCT TACTACACTT TTCCTGAAAT TTGTTCAGCA AAAGATAATA
    CCTATGCAAA CAGATGTTAC AGCTGTGCAA AATCAAAAGT GCCTTGCTAC ACTAGCCCGT
    ATAGCCTGGT ATCTTGGAGA AAAGCACCAA AGTACCATGA ACAGTGATAT TCTTCCTTCT
    AAGGAACTTA AAGAATTTGC TCTGAAATAT GGATTTTTCC TGCCATTTGC ATTCCCCAAA
    CATTCAGATA CTGAGGAGGA GGAACTTGGG ACCACATTCT CCGATTTTGT CATTCAGAAT
    TTCTTGGGTG CGCTTCACCT TGTATTAGCA GAAGACGTGA AGGATAAAAG TCTAACAAAG
    TACCTGTCTT TTCCATCCAA GAAGAAAAAG CCTTATAACT GGTTAGACTT AGTGCCTCGA
    TTTTTGGCTG GATTGTTGTT CCTCCAGGAT GATGCCTACT TCTGCTCCCT TTCTAATAAG
    GAAATAAAAC AATCAACCAA GAAGCAGAAA ACACTCCTGA AATATGTTAG AAGGTTGCAG
    ATAAATGACC TCTGTCCAGA GAGGTTACTC GAGCTTTTAC ACTGCATATA TGAAACACAA
    TACAATTATC TGTTGCAGCA TGTGACCTTA AGGCTCAAGA CAGACCTGTC TTTCCATGGC
    ATTTTTATTA CACCACCAGA TGTTCATGTA CTTTACTCTA CTTTAAAAAG GTCAAGAAAA
    GAGTTTTCCT TGGATTTGCA AAACAGCAAC ATTGACATGC AGGGGCTAAA AGACTTGGTT
    GGCCTGAAGA ATGTGGCATC ATTCAGGGCC TCCCTTGGTG ATACAATCAG GCTATGGAAA
    TACTTAGAAC AGACAAAAGA CTATGAACTG CTGAAACTGT CAACAGAAAA ATTTGTTCTC
    GATCCCTTTA AGGCAAAGAC AATGAAGGAT ATCAGTGACC TTTCAGACCT TGTAGAAATG
    CAGGAGATGA TCAGTTGCAT GCAAGATGCC TCTGGTTGCA GCAGCTATGA AATTCCTGCT
    ATAAAGAACC TGAGAAAAAT AGAATTTGCT CTAGGTCCAG CATATGGCCT TCAGGGATTT
    CTAAAACTTG TGGAAATTCT GCCGTCATTT CCATCACTTC AGCATTTAGA CCTTGATGCT
    CTGAGTGAAA ATGGCATAGG AGATGAAGGA GCAAAGAGTC TATCTGAAGT CTTTCCAACA
    CTGAGATCAC TGGAAATATT GAACTTATCA CAGAATAAGA TAACAGATGT GGGTGCAGAG
    AAACTAGCTA CAACTCTTCC TGCCTTATCT TCATTAACAA CACTAAGCTT GTACAATAAT
    AACATTTGTG ATTTTGGAGC AGAAAATCTT GCAAAAGTTC TTCATGCGAT GGCATCTTTA
    AGAGTGCTAG ATGTTCAGTA TAACAAAATA ACTGGTGTTG GAGCCCAACA GCTGACTGAC
    AGCCTACGAA AATGCCCCCA TATAAAAAAC TTGTTGATAT GGAATCCTAC AATTCCTTAT
    GGAGTTCTTG AACACCTTCA GCAGCTGGAC TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325141.1
    CDS54..3701
    Translation

    Target ORF information:

    RefSeq Version XM_027469340.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469340.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGCTTAGAA
    ATATTCAAAG AAGTCCAAGT TCCTCTAATT CCTTCTGAAG AACTTTTCAA AAGACCAAGG
    TCAGTGGAAG TCTTCTGTAG AGCGCTTAAG GATTACTTTG GAGACATATG CAAATATGTG
    GCCATGGAGC GTGAAGTGAC TCTTGATCAC TTGTTTATTG ATGGTACACT TGTGCAAAAC
    CAAATTGAAA CCAAGACTGG AAAGCACAGT GTAAAAGCAA TGGAAAAGGA GCCGGTAACT
    TACAATCTAC AATGGAAGGA AAAGGCATCA CTTGAAAGAA GCCAAATATT TCAAATCCCA
    GGAGGTAAAG ATTTAGAGAC TAAAGTGATT GTGGTGCTGG GAAAAGCAGG AATGGGCAAA
    AGCATTCTTG TACAGAAGAT CTGTCAGGAC TGGTCCAATG GAGAGTTTCC TCAGTTTGAA
    TTTCTCTTTT GGTTTGACTG CAAACAAATA AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG
    GATCTGCTTC TTGATTTTTT TGTAAAACCT CAAGAGGGAA GCAACGAAAT CTTTGAGTAC
    ATATTGCAAA ATCCTGCTAA AGTCCTTCTG GTTTTTGATG GTTTTCAAGG GTTGCATGAC
    CATGAGAATT TTCCTCGTTG CTCAGACAGA CAGCCTGACA AAGGCTTGTA CAATATAAAG
    GAGCTGCTTT CAGGACTTAT CCAAAAAAAA ATATTCAGTG GCTGTACTTT ATTACTTACA
    GGAAGACCAA AAGACAAGGT GAACCAGTAT GTGTCCAAAG TGGATAAGAC TATTGAAATA
    GTAGGATTCT CTCCTCAGCA GAGAGAATTG TACATAACCA AATACTTTGA AGGATTACCC
    TACTGTGATA ATGCACTGAA ATTAATCAAA GAGAGTGAGT ACCTGTTCAG TCATTGTTAC
    AGCCCTGTTA TATGTAGATT TGTTTGTTTT CTCTGTGAGA CAGTACTTGA AATGGGAGAC
    AAAGGCCTTC CTTCAACTCT TACTACACTT TTCCTGAAAT TTGTTCAGCA AAAGATAATA
    CCTATGCAAA CAGATGTTAC AGCTGTGCAA AATCAAAAGT GCCTTGCTAC ACTAGCCCGT
    ATAGCCTGGT ATCTTGGAGA AAAGCACCAA AGTACCATGA ACAGTGATAT TCTTCCTTCT
    AAGGAACTTA AAGAATTTGC TCTGAAATAT GGATTTTTCC TGCCATTTGC ATTCCCCAAA
    CATTCAGATA CTGAGGAGGA GGAACTTGGG ACCACATTCT CCGATTTTGT CATTCAGAAT
    TTCTTGGGTG CGCTTCACCT TGTATTAGCA GAAGACGTGA AGGATAAAAG TCTAACAAAG
    TACCTGTCTT TTCCATCCAA GAAGAAAAAG CCTTATAACT GGTTAGACTT AGTGCCTCGA
    TTTTTGGCTG GATTGTTGTT CCTCCAGGAT GATGCCTACT TCTGCTCCCT TTCTAATAAG
    GAAATAAAAC AATCAACCAA GAAGCAGAAA ACACTCCTGA AATATGTTAG AAGGTTGCAG
    ATAAATGACC TCTGTCCAGA GAGGTTACTC GAGCTTTTAC ACTGCATATA TGAAACACAA
    TACAATTATC TGTTGCAGCA TGTGACCTTA AGGCTCAAGA CAGACCTGTC TTTCCATGGC
    ATTTTTATTA CACCACCAGA TGTTCATGTA CTTTACTCTA CTTTAAAAAG GTCAAGAAAA
    GAGTTTTCCT TGGATTTGCA AAACAGCAAC ATTGACATGC AGGGGCTAAA AGACTTGGTT
    GGCCTGAAGA ATGTGGCATC ATTCAGGGCC TCCCTTGGTG ATACAATCAG GCTATGGAAA
    TACTTAGAAC AGACAAAAGA CTATGAACTG CTGAAACTGT CAACAGAAAA ATTTGTTCTC
    GATCCCTTTA AGGCAAAGAC AATGAAGGAT ATCAGTGACC TTTCAGACCT TGTAGAAATG
    CAGGAGATGA TCAGTTGCAT GCAAGATGCC TCTGGTTGCA GCAGCTATGA AATTCCTGCT
    ATAAAGAACC TGAGAAAAAT AGAATTTGCT CTAGGTCCAG CATATGGCCT TCAGGGATTT
    CTAAAACTTG TGGAAATTCT GCCGTCATTT CCATCACTTC AGCATTTAGA CCTTGATGCT
    CTGAGTGAAA ATGGCATAGG AGATGAAGGA GCAAAGAGTC TATCTGAAGT CTTTCCAACA
    CTGAGATCAC TGGAAATATT GAACTTATCA CAGAATAAGA TAACAGATGT GGGTGCAGAG
    AAACTAGCTA CAACTCTTCC TGCCTTATCT TCATTAACAA CACTAAGCTT GTACAATAAT
    AACATTTGTG ATTTTGGAGC AGAAAATCTT GCAAAAGTTC TTCATGCGAT GGCATCTTTA
    AGAGTGCTAG ATGTTCAGTA TAACAAAATA ACTGGTGTTG GAGCCCAACA GCTGACTGAC
    AGCCTACGAA AATGCCCCCA TATAAAAAAC TTGTTGATAT GGAATCCTAC AATTCCTTAT
    GGAGTTCTTG AACACCTTCA GCAGCTGGAC TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166453
    Clone ID Related Accession (Same CDS sequence) XM_021277534.2
    Accession Version XM_021277534.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3642bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 20, 2018 this sequence version replaced XM_021277534.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGGA TCTTCAGCAC CTTTGATTCC AGAGTGTCTA
    CCCTTTGGCA TGAAAGACAA ACAAGAGAAT GTAGACTTTG CAGATCTTGC TCAGCAGAAA
    AATAATTTTT TAATAGGAAA TGGCACATCA AGTATTATAA CATATCCAGC ACTGACTACC
    TCCACTGAAA CAATGTTTTC CCCGAGTTTT CCAGTTAATG TATGTGGCTT AGAAATATTC
    AAAGAAGTCC AAGTTCCTCT AATTCCTTCT GAAGAACTTT TCAAAAGACC AAGGTCAGTG
    GAAGTCTTCT GTAGAGCGCT TAAGGATTAC TTTGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCCGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTC AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAAAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTGGCTGTA CTTTATTACT TACAGGAAGA
    CCAAAAGACA AGGTGAACCA GTATGTGTCC AAAGTGGATA AGACTATTGA AATAGTAGGA
    TTCTCTCCTC AGCAGAGAGA ATTGTACATA ACCAAATACT TTGAAGGATT ACCCTACTGT
    GATAATGCAC TGAAATTAAT CAAAGAGAGT GAGTACCTGT TCAGTCATTG TTACAGCCCT
    GTTATATGTA GATTTGTTTG TTTTCTCTGT GAGACAGTAC TTGAAATGGG AGACAAAGGC
    CTTCCTTCAA CTCTTACTAC ACTTTTCCTG AAATTTGTTC AGCAAAAGAT AATACCTATG
    CAAACAGATG TTACAGCTGT GCAAAATCAA AAGTGCCTTG CTACACTAGC CCGTATAGCC
    TGGTATCTTG GAGAAAAGCA CCAAAGTACC ATGAACAGTG ATATTCTTCC TTCTAAGGAA
    CTTAAAGAAT TTGCTCTGAA ATATGGATTT TTCCTGCCAT TTGCATTCCC CAAACATTCA
    GATACTGAGG AGGAGGAACT TGGGACCACA TTCTCCGATT TTGTCATTCA GAATTTCTTG
    GGTGCGCTTC ACCTTGTATT AGCAGAAGAC GTGAAGGATA AAAGTCTAAC AAAGTACCTG
    TCTTTTCCAT CCAAGAAGAA AAAGCCTTAT AACTGGTTAG ACTTAGTGCC TCGATTTTTG
    GCTGGATTGT TGTTCCTCCA GGATGATGCC TACTTCTGCT CCCTTTCTAA TAAGGAAATA
    AAACAATCAA CCAAGAAGCA GAAAACACTC CTGAAATATG TTAGAAGGTT GCAGATAAAT
    GACCTCTGTC CAGAGAGGTT ACTCGAGCTT TTACACTGCA TATATGAAAC ACAATACAAT
    TATCTGTTGC AGCATGTGAC CTTAAGGCTC AAGACAGACC TGTCTTTCCA TGGCATTTTT
    ATTACACCAC CAGATGTTCA TGTACTTTAC TCTACTTTAA AAAGGTCAAG AAAAGAGTTT
    TCCTTGGATT TGCAAAACAG CAACATTGAC ATGCAGGGGC TAAAAGACTT GGTTGGCCTG
    AAGAATGTGG CATCATTCAG GGCCTCCCTT GGTGATACAA TCAGGCTATG GAAATACTTA
    GAACAGACAA AAGACTATGA ACTGCTGAAA CTGTCAACAG AAAAATTTGT TCTCGATCCC
    TTTAAGGCAA AGACAATGAA GGATATCAGT GACCTTTCAG ACCTTGTAGA AATGCAGGAG
    ATGATCAGTT GCATGCAAGA TGCCTCTGGT TGCAGCAGCT ATGAAATTCC TGCTATAAAG
    AACCTGAGAA AAATAGAATT TGCTCTAGGT CCAGCATATG GCCTTCAGGG ATTTCTAAAA
    CTTGTGGAAA TTCTGCCGTC ATTTCCATCA CTTCAGCATT TAGACCTTGA TGCTCTGAGT
    GAAAATGGCA TAGGAGATGA AGGAGCAAAG AGTCTATCTG AAGTCTTTCC AACACTGAGA
    TCACTGGAAA TATTGAACTT ATCACAGAAT AAGATAACAG ATGTGGGTGC AGAGAAACTA
    GCTACAACTC TTCCTGCCTT ATCTTCATTA ACAACACTAA GCTTGTACAA TAATAACATT
    TGTGATTTTG GAGCAGAAAA TCTTGCAAAA GTTCTTCATG CGATGGCATC TTTAAGAGTG
    CTAGATGTTC AGTATAACAA AATAACTGGT GTTGGAGCCC AACAGCTGAC TGACAGCCTA
    CGAAAATGCC CCCATATAAA AAACTTGTTG ATATGGAATC CTACAATTCC TTATGGAGTT
    CTTGAACACC TTCAGCAGCT GGACTCGAGG ATCAGTGTGT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021133209.2
    CDS55..3696
    Translation

    Target ORF information:

    RefSeq Version XM_021277534.2
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_021277534.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGGA TCTTCAGCAC CTTTGATTCC AGAGTGTCTA
    CCCTTTGGCA TGAAAGACAA ACAAGAGAAT GTAGACTTTG CAGATCTTGC TCAGCAGAAA
    AATAATTTTT TAATAGGAAA TGGCACATCA AGTATTATAA CATATCCAGC ACTGACTACC
    TCCACTGAAA CAATGTTTTC CCCGAGTTTT CCAGTTAATG TATGTGGCTT AGAAATATTC
    AAAGAAGTCC AAGTTCCTCT AATTCCTTCT GAAGAACTTT TCAAAAGACC AAGGTCAGTG
    GAAGTCTTCT GTAGAGCGCT TAAGGATTAC TTTGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCCGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTC AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAAAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTGGCTGTA CTTTATTACT TACAGGAAGA
    CCAAAAGACA AGGTGAACCA GTATGTGTCC AAAGTGGATA AGACTATTGA AATAGTAGGA
    TTCTCTCCTC AGCAGAGAGA ATTGTACATA ACCAAATACT TTGAAGGATT ACCCTACTGT
    GATAATGCAC TGAAATTAAT CAAAGAGAGT GAGTACCTGT TCAGTCATTG TTACAGCCCT
    GTTATATGTA GATTTGTTTG TTTTCTCTGT GAGACAGTAC TTGAAATGGG AGACAAAGGC
    CTTCCTTCAA CTCTTACTAC ACTTTTCCTG AAATTTGTTC AGCAAAAGAT AATACCTATG
    CAAACAGATG TTACAGCTGT GCAAAATCAA AAGTGCCTTG CTACACTAGC CCGTATAGCC
    TGGTATCTTG GAGAAAAGCA CCAAAGTACC ATGAACAGTG ATATTCTTCC TTCTAAGGAA
    CTTAAAGAAT TTGCTCTGAA ATATGGATTT TTCCTGCCAT TTGCATTCCC CAAACATTCA
    GATACTGAGG AGGAGGAACT TGGGACCACA TTCTCCGATT TTGTCATTCA GAATTTCTTG
    GGTGCGCTTC ACCTTGTATT AGCAGAAGAC GTGAAGGATA AAAGTCTAAC AAAGTACCTG
    TCTTTTCCAT CCAAGAAGAA AAAGCCTTAT AACTGGTTAG ACTTAGTGCC TCGATTTTTG
    GCTGGATTGT TGTTCCTCCA GGATGATGCC TACTTCTGCT CCCTTTCTAA TAAGGAAATA
    AAACAATCAA CCAAGAAGCA GAAAACACTC CTGAAATATG TTAGAAGGTT GCAGATAAAT
    GACCTCTGTC CAGAGAGGTT ACTCGAGCTT TTACACTGCA TATATGAAAC ACAATACAAT
    TATCTGTTGC AGCATGTGAC CTTAAGGCTC AAGACAGACC TGTCTTTCCA TGGCATTTTT
    ATTACACCAC CAGATGTTCA TGTACTTTAC TCTACTTTAA AAAGGTCAAG AAAAGAGTTT
    TCCTTGGATT TGCAAAACAG CAACATTGAC ATGCAGGGGC TAAAAGACTT GGTTGGCCTG
    AAGAATGTGG CATCATTCAG GGCCTCCCTT GGTGATACAA TCAGGCTATG GAAATACTTA
    GAACAGACAA AAGACTATGA ACTGCTGAAA CTGTCAACAG AAAAATTTGT TCTCGATCCC
    TTTAAGGCAA AGACAATGAA GGATATCAGT GACCTTTCAG ACCTTGTAGA AATGCAGGAG
    ATGATCAGTT GCATGCAAGA TGCCTCTGGT TGCAGCAGCT ATGAAATTCC TGCTATAAAG
    AACCTGAGAA AAATAGAATT TGCTCTAGGT CCAGCATATG GCCTTCAGGG ATTTCTAAAA
    CTTGTGGAAA TTCTGCCGTC ATTTCCATCA CTTCAGCATT TAGACCTTGA TGCTCTGAGT
    GAAAATGGCA TAGGAGATGA AGGAGCAAAG AGTCTATCTG AAGTCTTTCC AACACTGAGA
    TCACTGGAAA TATTGAACTT ATCACAGAAT AAGATAACAG ATGTGGGTGC AGAGAAACTA
    GCTACAACTC TTCCTGCCTT ATCTTCATTA ACAACACTAA GCTTGTACAA TAATAACATT
    TGTGATTTTG GAGCAGAAAA TCTTGCAAAA GTTCTTCATG CGATGGCATC TTTAAGAGTG
    CTAGATGTTC AGTATAACAA AATAACTGGT GTTGGAGCCC AACAGCTGAC TGACAGCCTA
    CGAAAATGCC CCCATATAAA AAACTTGTTG ATATGGAATC CTACAATTCC TTATGGAGTT
    CTTGAACACC TTCAGCAGCT GGACTCGAGG ATCAGTGTGT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166454
    Clone ID Related Accession (Same CDS sequence) XM_027469341.1
    Accession Version XM_027469341.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3591bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGGCTTA
    GAAATATTCA AAGAAGTCCA AGTTCCTCTA ATTCCTTCTG AAGAACTTTT CAAAAGACCA
    AGGTCAGTGG AAGTCTTCTG TAGAGCGCTT AAGGATTACT TTGGAGACAT ATGCAAATAT
    GTGGCCATGG AGCGTGAAGT GACTCTTGAT CACTTGTTTA TTGATGGTAC ACTTGTGCAA
    AACCAAATTG AAACCAAGAC TGGAAAGCAC AGTGTAAAAG CAATGGAAAA GGAGCCGGTA
    ACTTACAATC TACAATGGAA GGAAAAGGCA TCACTTGAAA GAAGCCAAAT ATTTCAAATC
    CCAGGAGGTA AAGATTTAGA GACTAAAGTG ATTGTGGTGC TGGGAAAAGC AGGAATGGGC
    AAAAGCATTC TTGTACAGAA GATCTGTCAG GACTGGTCCA ATGGAGAGTT TCCTCAGTTT
    GAATTTCTCT TTTGGTTTGA CTGCAAACAA ATAAGCTTGC CTGAGAAGTG TTACAGCTTG
    AAGGATCTGC TTCTTGATTT TTTTGTAAAA CCTCAAGAGG GAAGCAACGA AATCTTTGAG
    TACATATTGC AAAATCCTGC TAAAGTCCTT CTGGTTTTTG ATGGTTTTCA AGGGTTGCAT
    GACCATGAGA ATTTTCCTCG TTGCTCAGAC AGACAGCCTG ACAAAGGCTT GTACAATATA
    AAGGAGCTGC TTTCAGGACT TATCCAAAAA AAAATATTCA GTGGCTGTAC TTTATTACTT
    ACAGGAAGAC CAAAAGACAA GGTGAACCAG TATGTGTCCA AAGTGGATAA GACTATTGAA
    ATAGTAGGAT TCTCTCCTCA GCAGAGAGAA TTGTACATAA CCAAATACTT TGAAGGATTA
    CCCTACTGTG ATAATGCACT GAAATTAATC AAAGAGAGTG AGTACCTGTT CAGTCATTGT
    TACAGCCCTG TTATATGTAG ATTTGTTTGT TTTCTCTGTG AGACAGTACT TGAAATGGGA
    GACAAAGGCC TTCCTTCAAC TCTTACTACA CTTTTCCTGA AATTTGTTCA GCAAAAGATA
    ATACCTATGC AAACAGATGT TACAGCTGTG CAAAATCAAA AGTGCCTTGC TACACTAGCC
    CGTATAGCCT GGTATCTTGG AGAAAAGCAC CAAAGTACCA TGAACAGTGA TATTCTTCCT
    TCTAAGGAAC TTAAAGAATT TGCTCTGAAA TATGGATTTT TCCTGCCATT TGCATTCCCC
    AAACATTCAG ATACTGAGGA GGAGGAACTT GGGACCACAT TCTCCGATTT TGTCATTCAG
    AATTTCTTGG GTGCGCTTCA CCTTGTATTA GCAGAAGACG TGAAGGATAA AAGTCTAACA
    AAGTACCTGT CTTTTCCATC CAAGAAGAAA AAGCCTTATA ACTGGTTAGA CTTAGTGCCT
    CGATTTTTGG CTGGATTGTT GTTCCTCCAG GATGATGCCT ACTTCTGCTC CCTTTCTAAT
    AAGGAAATAA AACAATCAAC CAAGAAGCAG AAAACACTCC TGAAATATGT TAGAAGGTTG
    CAGATAAATG ACCTCTGTCC AGAGAGGTTA CTCGAGCTTT TACACTGCAT ATATGAAACA
    CAATACAATT ATCTGTTGCA GCATGTGACC TTAAGGCTCA AGACAGACCT GTCTTTCCAT
    GGCATTTTTA TTACACCACC AGATGTTCAT GTACTTTACT CTACTTTAAA AAGGTCAAGA
    AAAGAGTTTT CCTTGGATTT GCAAAACAGC AACATTGACA TGCAGGGGCT AAAAGACTTG
    GTTGGCCTGA AGAATGTGGC ATCATTCAGG GCCTCCCTTG GTGATACAAT CAGGCTATGG
    AAATACTTAG AACAGACAAA AGACTATGAA CTGCTGAAAC TGTCAACAGA AAAATTTGTT
    CTCGATCCCT TTAAGGCAAA GACAATGAAG GATATCAGTG ACCTTTCAGA CCTTGTAGAA
    ATGCAGGAGA TGATCAGTTG CATGCAAGAT GCCTCTGGTT GCAGCAGCTA TGAAATTCCT
    GCTATAAAGA ACCTGAGAAA AATAGAATTT GCTCTAGGTC CAGCATATGG CCTTCAGGGA
    TTTCTAAAAC TTGTGGAAAT TCTGCCGTCA TTTCCATCAC TTCAGCATTT AGACCTTGAT
    GCTCTGAGTG AAAATGGCAT AGGAGATGAA GGAGCAAAGA GTCTATCTGA AGTCTTTCCA
    ACACTGAGAT CACTGGAAAT ATTGAACTTA TCACAGAATA AGATAACAGA TGTGGGTGCA
    GAGAAACTAG CTACAACTCT TCCTGCCTTA TCTTCATTAA CAACACTAAG CTTGTACAAT
    AATAACATTT GTGATTTTGG AGCAGAAAAT CTTGCAAAAG TTCTTCATGC GATGGCATCT
    TTAAGAGTGC TAGATGTTCA GTATAACAAA ATAACTGGTG TTGGAGCCCA ACAGCTGACT
    GACAGCCTAC GAAAATGCCC CCATATAAAA AACTTGTTGA TATGGAATCC TACAATTCCT
    TATGGAGTTC TTGAACACCT TCAGCAGCTG GACTCGAGGA TCAGTGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325142.1
    CDS54..3644
    Translation

    Target ORF information:

    RefSeq Version XM_027469341.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469341.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGGCTTA
    GAAATATTCA AAGAAGTCCA AGTTCCTCTA ATTCCTTCTG AAGAACTTTT CAAAAGACCA
    AGGTCAGTGG AAGTCTTCTG TAGAGCGCTT AAGGATTACT TTGGAGACAT ATGCAAATAT
    GTGGCCATGG AGCGTGAAGT GACTCTTGAT CACTTGTTTA TTGATGGTAC ACTTGTGCAA
    AACCAAATTG AAACCAAGAC TGGAAAGCAC AGTGTAAAAG CAATGGAAAA GGAGCCGGTA
    ACTTACAATC TACAATGGAA GGAAAAGGCA TCACTTGAAA GAAGCCAAAT ATTTCAAATC
    CCAGGAGGTA AAGATTTAGA GACTAAAGTG ATTGTGGTGC TGGGAAAAGC AGGAATGGGC
    AAAAGCATTC TTGTACAGAA GATCTGTCAG GACTGGTCCA ATGGAGAGTT TCCTCAGTTT
    GAATTTCTCT TTTGGTTTGA CTGCAAACAA ATAAGCTTGC CTGAGAAGTG TTACAGCTTG
    AAGGATCTGC TTCTTGATTT TTTTGTAAAA CCTCAAGAGG GAAGCAACGA AATCTTTGAG
    TACATATTGC AAAATCCTGC TAAAGTCCTT CTGGTTTTTG ATGGTTTTCA AGGGTTGCAT
    GACCATGAGA ATTTTCCTCG TTGCTCAGAC AGACAGCCTG ACAAAGGCTT GTACAATATA
    AAGGAGCTGC TTTCAGGACT TATCCAAAAA AAAATATTCA GTGGCTGTAC TTTATTACTT
    ACAGGAAGAC CAAAAGACAA GGTGAACCAG TATGTGTCCA AAGTGGATAA GACTATTGAA
    ATAGTAGGAT TCTCTCCTCA GCAGAGAGAA TTGTACATAA CCAAATACTT TGAAGGATTA
    CCCTACTGTG ATAATGCACT GAAATTAATC AAAGAGAGTG AGTACCTGTT CAGTCATTGT
    TACAGCCCTG TTATATGTAG ATTTGTTTGT TTTCTCTGTG AGACAGTACT TGAAATGGGA
    GACAAAGGCC TTCCTTCAAC TCTTACTACA CTTTTCCTGA AATTTGTTCA GCAAAAGATA
    ATACCTATGC AAACAGATGT TACAGCTGTG CAAAATCAAA AGTGCCTTGC TACACTAGCC
    CGTATAGCCT GGTATCTTGG AGAAAAGCAC CAAAGTACCA TGAACAGTGA TATTCTTCCT
    TCTAAGGAAC TTAAAGAATT TGCTCTGAAA TATGGATTTT TCCTGCCATT TGCATTCCCC
    AAACATTCAG ATACTGAGGA GGAGGAACTT GGGACCACAT TCTCCGATTT TGTCATTCAG
    AATTTCTTGG GTGCGCTTCA CCTTGTATTA GCAGAAGACG TGAAGGATAA AAGTCTAACA
    AAGTACCTGT CTTTTCCATC CAAGAAGAAA AAGCCTTATA ACTGGTTAGA CTTAGTGCCT
    CGATTTTTGG CTGGATTGTT GTTCCTCCAG GATGATGCCT ACTTCTGCTC CCTTTCTAAT
    AAGGAAATAA AACAATCAAC CAAGAAGCAG AAAACACTCC TGAAATATGT TAGAAGGTTG
    CAGATAAATG ACCTCTGTCC AGAGAGGTTA CTCGAGCTTT TACACTGCAT ATATGAAACA
    CAATACAATT ATCTGTTGCA GCATGTGACC TTAAGGCTCA AGACAGACCT GTCTTTCCAT
    GGCATTTTTA TTACACCACC AGATGTTCAT GTACTTTACT CTACTTTAAA AAGGTCAAGA
    AAAGAGTTTT CCTTGGATTT GCAAAACAGC AACATTGACA TGCAGGGGCT AAAAGACTTG
    GTTGGCCTGA AGAATGTGGC ATCATTCAGG GCCTCCCTTG GTGATACAAT CAGGCTATGG
    AAATACTTAG AACAGACAAA AGACTATGAA CTGCTGAAAC TGTCAACAGA AAAATTTGTT
    CTCGATCCCT TTAAGGCAAA GACAATGAAG GATATCAGTG ACCTTTCAGA CCTTGTAGAA
    ATGCAGGAGA TGATCAGTTG CATGCAAGAT GCCTCTGGTT GCAGCAGCTA TGAAATTCCT
    GCTATAAAGA ACCTGAGAAA AATAGAATTT GCTCTAGGTC CAGCATATGG CCTTCAGGGA
    TTTCTAAAAC TTGTGGAAAT TCTGCCGTCA TTTCCATCAC TTCAGCATTT AGACCTTGAT
    GCTCTGAGTG AAAATGGCAT AGGAGATGAA GGAGCAAAGA GTCTATCTGA AGTCTTTCCA
    ACACTGAGAT CACTGGAAAT ATTGAACTTA TCACAGAATA AGATAACAGA TGTGGGTGCA
    GAGAAACTAG CTACAACTCT TCCTGCCTTA TCTTCATTAA CAACACTAAG CTTGTACAAT
    AATAACATTT GTGATTTTGG AGCAGAAAAT CTTGCAAAAG TTCTTCATGC GATGGCATCT
    TTAAGAGTGC TAGATGTTCA GTATAACAAA ATAACTGGTG TTGGAGCCCA ACAGCTGACT
    GACAGCCTAC GAAAATGCCC CCATATAAAA AACTTGTTGA TATGGAATCC TACAATTCCT
    TATGGAGTTC TTGAACACCT TCAGCAGCTG GACTCGAGGA TCAGTGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166455
    Clone ID Related Accession (Same CDS sequence) XM_027469342.1
    Accession Version XM_027469342.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3582bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGGTCAGTG
    GAAGTCTTCT GTAGAGCGCT TAAGGATTAC TTTGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCCGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTC AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAAAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTGGCTGTA CTTTATTACT TACAGGAAGA
    CCAAAAGACA AGGTGAACCA GTATGTGTCC AAAGTGGATA AGACTATTGA AATAGTAGGA
    TTCTCTCCTC AGCAGAGAGA ATTGTACATA ACCAAATACT TTGAAGGATT ACCCTACTGT
    GATAATGCAC TGAAATTAAT CAAAGAGAGT GAGTACCTGT TCAGTCATTG TTACAGCCCT
    GTTATATGTA GATTTGTTTG TTTTCTCTGT GAGACAGTAC TTGAAATGGG AGACAAAGGC
    CTTCCTTCAA CTCTTACTAC ACTTTTCCTG AAATTTGTTC AGCAAAAGAT AATACCTATG
    CAAACAGATG TTACAGCTGT GCAAAATCAA AAGTGCCTTG CTACACTAGC CCGTATAGCC
    TGGTATCTTG GAGAAAAGCA CCAAAGTACC ATGAACAGTG ATATTCTTCC TTCTAAGGAA
    CTTAAAGAAT TTGCTCTGAA ATATGGATTT TTCCTGCCAT TTGCATTCCC CAAACATTCA
    GATACTGAGG AGGAGGAACT TGGGACCACA TTCTCCGATT TTGTCATTCA GAATTTCTTG
    GGTGCGCTTC ACCTTGTATT AGCAGAAGAC GTGAAGGATA AAAGTCTAAC AAAGTACCTG
    TCTTTTCCAT CCAAGAAGAA AAAGCCTTAT AACTGGTTAG ACTTAGTGCC TCGATTTTTG
    GCTGGATTGT TGTTCCTCCA GGATGATGCC TACTTCTGCT CCCTTTCTAA TAAGGAAATA
    AAACAATCAA CCAAGAAGCA GAAAACACTC CTGAAATATG TTAGAAGGTT GCAGATAAAT
    GACCTCTGTC CAGAGAGGTT ACTCGAGCTT TTACACTGCA TATATGAAAC ACAATACAAT
    TATCTGTTGC AGCATGTGAC CTTAAGGCTC AAGACAGACC TGTCTTTCCA TGGCATTTTT
    ATTACACCAC CAGATGTTCA TGTACTTTAC TCTACTTTAA AAAGGTCAAG AAAAGAGTTT
    TCCTTGGATT TGCAAAACAG CAACATTGAC ATGCAGGGGC TAAAAGACTT GGTTGGCCTG
    AAGAATGTGG CATCATTCAG GGCCTCCCTT GGTGATACAA TCAGGCTATG GAAATACTTA
    GAACAGACAA AAGACTATGA ACTGCTGAAA CTGTCAACAG AAAAATTTGT TCTCGATCCC
    TTTAAGGCAA AGACAATGAA GGATATCAGT GACCTTTCAG ACCTTGTAGA AATGCAGGAG
    ATGATCAGTT GCATGCAAGA TGCCTCTGGT TGCAGCAGCT ATGAAATTCC TGCTATAAAG
    AACCTGAGAA AAATAGAATT TGCTCTAGGT CCAGCATATG GCCTTCAGGG ATTTCTAAAA
    CTTGTGGAAA TTCTGCCGTC ATTTCCATCA CTTCAGCATT TAGACCTTGA TGCTCTGAGT
    GAAAATGGCA TAGGAGATGA AGGAGCAAAG AGTCTATCTG AAGTCTTTCC AACACTGAGA
    TCACTGGAAA TATTGAACTT ATCACAGAAT AAGATAACAG ATGTGGGTGC AGAGAAACTA
    GCTACAACTC TTCCTGCCTT ATCTTCATTA ACAACACTAA GCTTGTACAA TAATAACATT
    TGTGATTTTG GAGCAGAAAA TCTTGCAAAA GTTCTTCATG CGATGGCATC TTTAAGAGTG
    CTAGATGTTC AGTATAACAA AATAACTGGT GTTGGAGCCC AACAGCTGAC TGACAGCCTA
    CGAAAATGCC CCCATATAAA AAACTTGTTG ATATGGAATC CTACAATTCC TTATGGAGTT
    CTTGAACACC TTCAGCAGCT GGACTCGAGG ATCAGTGTGT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325143.1
    CDS54..3635
    Translation

    Target ORF information:

    RefSeq Version XM_027469342.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469342.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGCACTG
    ACTACCTCCA CTGAAACAAT GTTTTCCCCG AGTTTTCCAG TTAATGTATG TGGGTCAGTG
    GAAGTCTTCT GTAGAGCGCT TAAGGATTAC TTTGGAGACA TATGCAAATA TGTGGCCATG
    GAGCGTGAAG TGACTCTTGA TCACTTGTTT ATTGATGGTA CACTTGTGCA AAACCAAATT
    GAAACCAAGA CTGGAAAGCA CAGTGTAAAA GCAATGGAAA AGGAGCCGGT AACTTACAAT
    CTACAATGGA AGGAAAAGGC ATCACTTGAA AGAAGCCAAA TATTTCAAAT CCCAGGAGGT
    AAAGATTTAG AGACTAAAGT GATTGTGGTG CTGGGAAAAG CAGGAATGGG CAAAAGCATT
    CTTGTACAGA AGATCTGTCA GGACTGGTCC AATGGAGAGT TTCCTCAGTT TGAATTTCTC
    TTTTGGTTTG ACTGCAAACA AATAAGCTTG CCTGAGAAGT GTTACAGCTT GAAGGATCTG
    CTTCTTGATT TTTTTGTAAA ACCTCAAGAG GGAAGCAACG AAATCTTTGA GTACATATTG
    CAAAATCCTG CTAAAGTCCT TCTGGTTTTT GATGGTTTTC AAGGGTTGCA TGACCATGAG
    AATTTTCCTC GTTGCTCAGA CAGACAGCCT GACAAAGGCT TGTACAATAT AAAGGAGCTG
    CTTTCAGGAC TTATCCAAAA AAAAATATTC AGTGGCTGTA CTTTATTACT TACAGGAAGA
    CCAAAAGACA AGGTGAACCA GTATGTGTCC AAAGTGGATA AGACTATTGA AATAGTAGGA
    TTCTCTCCTC AGCAGAGAGA ATTGTACATA ACCAAATACT TTGAAGGATT ACCCTACTGT
    GATAATGCAC TGAAATTAAT CAAAGAGAGT GAGTACCTGT TCAGTCATTG TTACAGCCCT
    GTTATATGTA GATTTGTTTG TTTTCTCTGT GAGACAGTAC TTGAAATGGG AGACAAAGGC
    CTTCCTTCAA CTCTTACTAC ACTTTTCCTG AAATTTGTTC AGCAAAAGAT AATACCTATG
    CAAACAGATG TTACAGCTGT GCAAAATCAA AAGTGCCTTG CTACACTAGC CCGTATAGCC
    TGGTATCTTG GAGAAAAGCA CCAAAGTACC ATGAACAGTG ATATTCTTCC TTCTAAGGAA
    CTTAAAGAAT TTGCTCTGAA ATATGGATTT TTCCTGCCAT TTGCATTCCC CAAACATTCA
    GATACTGAGG AGGAGGAACT TGGGACCACA TTCTCCGATT TTGTCATTCA GAATTTCTTG
    GGTGCGCTTC ACCTTGTATT AGCAGAAGAC GTGAAGGATA AAAGTCTAAC AAAGTACCTG
    TCTTTTCCAT CCAAGAAGAA AAAGCCTTAT AACTGGTTAG ACTTAGTGCC TCGATTTTTG
    GCTGGATTGT TGTTCCTCCA GGATGATGCC TACTTCTGCT CCCTTTCTAA TAAGGAAATA
    AAACAATCAA CCAAGAAGCA GAAAACACTC CTGAAATATG TTAGAAGGTT GCAGATAAAT
    GACCTCTGTC CAGAGAGGTT ACTCGAGCTT TTACACTGCA TATATGAAAC ACAATACAAT
    TATCTGTTGC AGCATGTGAC CTTAAGGCTC AAGACAGACC TGTCTTTCCA TGGCATTTTT
    ATTACACCAC CAGATGTTCA TGTACTTTAC TCTACTTTAA AAAGGTCAAG AAAAGAGTTT
    TCCTTGGATT TGCAAAACAG CAACATTGAC ATGCAGGGGC TAAAAGACTT GGTTGGCCTG
    AAGAATGTGG CATCATTCAG GGCCTCCCTT GGTGATACAA TCAGGCTATG GAAATACTTA
    GAACAGACAA AAGACTATGA ACTGCTGAAA CTGTCAACAG AAAAATTTGT TCTCGATCCC
    TTTAAGGCAA AGACAATGAA GGATATCAGT GACCTTTCAG ACCTTGTAGA AATGCAGGAG
    ATGATCAGTT GCATGCAAGA TGCCTCTGGT TGCAGCAGCT ATGAAATTCC TGCTATAAAG
    AACCTGAGAA AAATAGAATT TGCTCTAGGT CCAGCATATG GCCTTCAGGG ATTTCTAAAA
    CTTGTGGAAA TTCTGCCGTC ATTTCCATCA CTTCAGCATT TAGACCTTGA TGCTCTGAGT
    GAAAATGGCA TAGGAGATGA AGGAGCAAAG AGTCTATCTG AAGTCTTTCC AACACTGAGA
    TCACTGGAAA TATTGAACTT ATCACAGAAT AAGATAACAG ATGTGGGTGC AGAGAAACTA
    GCTACAACTC TTCCTGCCTT ATCTTCATTA ACAACACTAA GCTTGTACAA TAATAACATT
    TGTGATTTTG GAGCAGAAAA TCTTGCAAAA GTTCTTCATG CGATGGCATC TTTAAGAGTG
    CTAGATGTTC AGTATAACAA AATAACTGGT GTTGGAGCCC AACAGCTGAC TGACAGCCTA
    CGAAAATGCC CCCATATAAA AAACTTGTTG ATATGGAATC CTACAATTCC TTATGGAGTT
    CTTGAACACC TTCAGCAGCT GGACTCGAGG ATCAGTGTGT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166456
    Clone ID Related Accession (Same CDS sequence) XM_027469343.1
    Accession Version XM_027469343.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3525bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X5
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGGGTCA
    GTGGAAGTCT TCTGTAGAGC GCTTAAGGAT TACTTTGGAG ACATATGCAA ATATGTGGCC
    ATGGAGCGTG AAGTGACTCT TGATCACTTG TTTATTGATG GTACACTTGT GCAAAACCAA
    ATTGAAACCA AGACTGGAAA GCACAGTGTA AAAGCAATGG AAAAGGAGCC GGTAACTTAC
    AATCTACAAT GGAAGGAAAA GGCATCACTT GAAAGAAGCC AAATATTTCA AATCCCAGGA
    GGTAAAGATT TAGAGACTAA AGTGATTGTG GTGCTGGGAA AAGCAGGAAT GGGCAAAAGC
    ATTCTTGTAC AGAAGATCTG TCAGGACTGG TCCAATGGAG AGTTTCCTCA GTTTGAATTT
    CTCTTTTGGT TTGACTGCAA ACAAATAAGC TTGCCTGAGA AGTGTTACAG CTTGAAGGAT
    CTGCTTCTTG ATTTTTTTGT AAAACCTCAA GAGGGAAGCA ACGAAATCTT TGAGTACATA
    TTGCAAAATC CTGCTAAAGT CCTTCTGGTT TTTGATGGTT TTCAAGGGTT GCATGACCAT
    GAGAATTTTC CTCGTTGCTC AGACAGACAG CCTGACAAAG GCTTGTACAA TATAAAGGAG
    CTGCTTTCAG GACTTATCCA AAAAAAAATA TTCAGTGGCT GTACTTTATT ACTTACAGGA
    AGACCAAAAG ACAAGGTGAA CCAGTATGTG TCCAAAGTGG ATAAGACTAT TGAAATAGTA
    GGATTCTCTC CTCAGCAGAG AGAATTGTAC ATAACCAAAT ACTTTGAAGG ATTACCCTAC
    TGTGATAATG CACTGAAATT AATCAAAGAG AGTGAGTACC TGTTCAGTCA TTGTTACAGC
    CCTGTTATAT GTAGATTTGT TTGTTTTCTC TGTGAGACAG TACTTGAAAT GGGAGACAAA
    GGCCTTCCTT CAACTCTTAC TACACTTTTC CTGAAATTTG TTCAGCAAAA GATAATACCT
    ATGCAAACAG ATGTTACAGC TGTGCAAAAT CAAAAGTGCC TTGCTACACT AGCCCGTATA
    GCCTGGTATC TTGGAGAAAA GCACCAAAGT ACCATGAACA GTGATATTCT TCCTTCTAAG
    GAACTTAAAG AATTTGCTCT GAAATATGGA TTTTTCCTGC CATTTGCATT CCCCAAACAT
    TCAGATACTG AGGAGGAGGA ACTTGGGACC ACATTCTCCG ATTTTGTCAT TCAGAATTTC
    TTGGGTGCGC TTCACCTTGT ATTAGCAGAA GACGTGAAGG ATAAAAGTCT AACAAAGTAC
    CTGTCTTTTC CATCCAAGAA GAAAAAGCCT TATAACTGGT TAGACTTAGT GCCTCGATTT
    TTGGCTGGAT TGTTGTTCCT CCAGGATGAT GCCTACTTCT GCTCCCTTTC TAATAAGGAA
    ATAAAACAAT CAACCAAGAA GCAGAAAACA CTCCTGAAAT ATGTTAGAAG GTTGCAGATA
    AATGACCTCT GTCCAGAGAG GTTACTCGAG CTTTTACACT GCATATATGA AACACAATAC
    AATTATCTGT TGCAGCATGT GACCTTAAGG CTCAAGACAG ACCTGTCTTT CCATGGCATT
    TTTATTACAC CACCAGATGT TCATGTACTT TACTCTACTT TAAAAAGGTC AAGAAAAGAG
    TTTTCCTTGG ATTTGCAAAA CAGCAACATT GACATGCAGG GGCTAAAAGA CTTGGTTGGC
    CTGAAGAATG TGGCATCATT CAGGGCCTCC CTTGGTGATA CAATCAGGCT ATGGAAATAC
    TTAGAACAGA CAAAAGACTA TGAACTGCTG AAACTGTCAA CAGAAAAATT TGTTCTCGAT
    CCCTTTAAGG CAAAGACAAT GAAGGATATC AGTGACCTTT CAGACCTTGT AGAAATGCAG
    GAGATGATCA GTTGCATGCA AGATGCCTCT GGTTGCAGCA GCTATGAAAT TCCTGCTATA
    AAGAACCTGA GAAAAATAGA ATTTGCTCTA GGTCCAGCAT ATGGCCTTCA GGGATTTCTA
    AAACTTGTGG AAATTCTGCC GTCATTTCCA TCACTTCAGC ATTTAGACCT TGATGCTCTG
    AGTGAAAATG GCATAGGAGA TGAAGGAGCA AAGAGTCTAT CTGAAGTCTT TCCAACACTG
    AGATCACTGG AAATATTGAA CTTATCACAG AATAAGATAA CAGATGTGGG TGCAGAGAAA
    CTAGCTACAA CTCTTCCTGC CTTATCTTCA TTAACAACAC TAAGCTTGTA CAATAATAAC
    ATTTGTGATT TTGGAGCAGA AAATCTTGCA AAAGTTCTTC ATGCGATGGC ATCTTTAAGA
    GTGCTAGATG TTCAGTATAA CAAAATAACT GGTGTTGGAG CCCAACAGCT GACTGACAGC
    CTACGAAAAT GCCCCCATAT AAAAAACTTG TTGATATGGA ATCCTACAAT TCCTTATGGA
    GTTCTTGAAC ACCTTCAGCA GCTGGACTCG AGGATCAGTG TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325144.1
    CDS54..3578
    Translation

    Target ORF information:

    RefSeq Version XM_027469343.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469343.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTG
    GATGCCCCTG CAGTGTCTAT AAGGAATGGC AGTTTCTTGG CTATGCCTCA CAGCAGCCAT
    CCAGCTAGCT CCACCTCGCT AACTCACCAG CACATGTCCT TTTCTGTTCC CGCTATCAAT
    GCACTGGGAA GAAGTTTTGT AATTCCTGTT TCAGGATCTT CAGCACCTTT GATTCCAGAG
    TGTCTACCCT TTGGCATGAA AGACAAACAA GAGAATGTAG ACTTTGCAGA TCTTGCTCAG
    CAGAAAAATA ATTTTTTAAT AGGAAATGGC ACATCAAGTA TTATAACATA TCCAGGGTCA
    GTGGAAGTCT TCTGTAGAGC GCTTAAGGAT TACTTTGGAG ACATATGCAA ATATGTGGCC
    ATGGAGCGTG AAGTGACTCT TGATCACTTG TTTATTGATG GTACACTTGT GCAAAACCAA
    ATTGAAACCA AGACTGGAAA GCACAGTGTA AAAGCAATGG AAAAGGAGCC GGTAACTTAC
    AATCTACAAT GGAAGGAAAA GGCATCACTT GAAAGAAGCC AAATATTTCA AATCCCAGGA
    GGTAAAGATT TAGAGACTAA AGTGATTGTG GTGCTGGGAA AAGCAGGAAT GGGCAAAAGC
    ATTCTTGTAC AGAAGATCTG TCAGGACTGG TCCAATGGAG AGTTTCCTCA GTTTGAATTT
    CTCTTTTGGT TTGACTGCAA ACAAATAAGC TTGCCTGAGA AGTGTTACAG CTTGAAGGAT
    CTGCTTCTTG ATTTTTTTGT AAAACCTCAA GAGGGAAGCA ACGAAATCTT TGAGTACATA
    TTGCAAAATC CTGCTAAAGT CCTTCTGGTT TTTGATGGTT TTCAAGGGTT GCATGACCAT
    GAGAATTTTC CTCGTTGCTC AGACAGACAG CCTGACAAAG GCTTGTACAA TATAAAGGAG
    CTGCTTTCAG GACTTATCCA AAAAAAAATA TTCAGTGGCT GTACTTTATT ACTTACAGGA
    AGACCAAAAG ACAAGGTGAA CCAGTATGTG TCCAAAGTGG ATAAGACTAT TGAAATAGTA
    GGATTCTCTC CTCAGCAGAG AGAATTGTAC ATAACCAAAT ACTTTGAAGG ATTACCCTAC
    TGTGATAATG CACTGAAATT AATCAAAGAG AGTGAGTACC TGTTCAGTCA TTGTTACAGC
    CCTGTTATAT GTAGATTTGT TTGTTTTCTC TGTGAGACAG TACTTGAAAT GGGAGACAAA
    GGCCTTCCTT CAACTCTTAC TACACTTTTC CTGAAATTTG TTCAGCAAAA GATAATACCT
    ATGCAAACAG ATGTTACAGC TGTGCAAAAT CAAAAGTGCC TTGCTACACT AGCCCGTATA
    GCCTGGTATC TTGGAGAAAA GCACCAAAGT ACCATGAACA GTGATATTCT TCCTTCTAAG
    GAACTTAAAG AATTTGCTCT GAAATATGGA TTTTTCCTGC CATTTGCATT CCCCAAACAT
    TCAGATACTG AGGAGGAGGA ACTTGGGACC ACATTCTCCG ATTTTGTCAT TCAGAATTTC
    TTGGGTGCGC TTCACCTTGT ATTAGCAGAA GACGTGAAGG ATAAAAGTCT AACAAAGTAC
    CTGTCTTTTC CATCCAAGAA GAAAAAGCCT TATAACTGGT TAGACTTAGT GCCTCGATTT
    TTGGCTGGAT TGTTGTTCCT CCAGGATGAT GCCTACTTCT GCTCCCTTTC TAATAAGGAA
    ATAAAACAAT CAACCAAGAA GCAGAAAACA CTCCTGAAAT ATGTTAGAAG GTTGCAGATA
    AATGACCTCT GTCCAGAGAG GTTACTCGAG CTTTTACACT GCATATATGA AACACAATAC
    AATTATCTGT TGCAGCATGT GACCTTAAGG CTCAAGACAG ACCTGTCTTT CCATGGCATT
    TTTATTACAC CACCAGATGT TCATGTACTT TACTCTACTT TAAAAAGGTC AAGAAAAGAG
    TTTTCCTTGG ATTTGCAAAA CAGCAACATT GACATGCAGG GGCTAAAAGA CTTGGTTGGC
    CTGAAGAATG TGGCATCATT CAGGGCCTCC CTTGGTGATA CAATCAGGCT ATGGAAATAC
    TTAGAACAGA CAAAAGACTA TGAACTGCTG AAACTGTCAA CAGAAAAATT TGTTCTCGAT
    CCCTTTAAGG CAAAGACAAT GAAGGATATC AGTGACCTTT CAGACCTTGT AGAAATGCAG
    GAGATGATCA GTTGCATGCA AGATGCCTCT GGTTGCAGCA GCTATGAAAT TCCTGCTATA
    AAGAACCTGA GAAAAATAGA ATTTGCTCTA GGTCCAGCAT ATGGCCTTCA GGGATTTCTA
    AAACTTGTGG AAATTCTGCC GTCATTTCCA TCACTTCAGC ATTTAGACCT TGATGCTCTG
    AGTGAAAATG GCATAGGAGA TGAAGGAGCA AAGAGTCTAT CTGAAGTCTT TCCAACACTG
    AGATCACTGG AAATATTGAA CTTATCACAG AATAAGATAA CAGATGTGGG TGCAGAGAAA
    CTAGCTACAA CTCTTCCTGC CTTATCTTCA TTAACAACAC TAAGCTTGTA CAATAATAAC
    ATTTGTGATT TTGGAGCAGA AAATCTTGCA AAAGTTCTTC ATGCGATGGC ATCTTTAAGA
    GTGCTAGATG TTCAGTATAA CAAAATAACT GGTGTTGGAG CCCAACAGCT GACTGACAGC
    CTACGAAAAT GCCCCCATAT AAAAAACTTG TTGATATGGA ATCCTACAAT TCCTTATGGA
    GTTCTTGAAC ACCTTCAGCA GCTGGACTCG AGGATCAGTG TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166457
    Clone ID Related Accession (Same CDS sequence) XM_027469344.1
    Accession Version XM_027469344.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3498bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X6
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTT
    TCAGGATCTT CAGCACCTTT GATTCCAGAG TGTCTACCCT TTGGCATGAA AGACAAACAA
    GAGAATGTAG ACTTTGCAGA TCTTGCTCAG CAGAAAAATA ATTTTTTAAT AGGAAATGGC
    ACATCAAGTA TTATAACATA TCCAGCACTG ACTACCTCCA CTGAAACAAT GTTTTCCCCG
    AGTTTTCCAG TTAATGTATG TGGCTTAGAA ATATTCAAAG AAGTCCAAGT TCCTCTAATT
    CCTTCTGAAG AACTTTTCAA AAGACCAAGG TCAGTGGAAG TCTTCTGTAG AGCGCTTAAG
    GATTACTTTG GAGACATATG CAAATATGTG GCCATGGAGC GTGAAGTGAC TCTTGATCAC
    TTGTTTATTG ATGGTACACT TGTGCAAAAC CAAATTGAAA CCAAGACTGG AAAGCACAGT
    GTAAAAGCAA TGGAAAAGGA GCCGGTAACT TACAATCTAC AATGGAAGGA AAAGGCATCA
    CTTGAAAGAA GCCAAATATT TCAAATCCCA GGAGGTAAAG ATTTAGAGAC TAAAGTGATT
    GTGGTGCTGG GAAAAGCAGG AATGGGCAAA AGCATTCTTG TACAGAAGAT CTGTCAGGAC
    TGGTCCAATG GAGAGTTTCC TCAGTTTGAA TTTCTCTTTT GGTTTGACTG CAAACAAATA
    AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG GATCTGCTTC TTGATTTTTT TGTAAAACCT
    CAAGAGGGAA GCAACGAAAT CTTTGAGTAC ATATTGCAAA ATCCTGCTAA AGTCCTTCTG
    GTTTTTGATG GTTTTCAAGG GTTGCATGAC CATGAGAATT TTCCTCGTTG CTCAGACAGA
    CAGCCTGACA AAGGCTTGTA CAATATAAAG GAGCTGCTTT CAGGACTTAT CCAAAAAAAA
    ATATTCAGTG GCTGTACTTT ATTACTTACA GGAAGACCAA AAGACAAGGT GAACCAGTAT
    GTGTCCAAAG TGGATAAGAC TATTGAAATA GTAGGATTCT CTCCTCAGCA GAGAGAATTG
    TACATAACCA AATACTTTGA AGGATTACCC TACTGTGATA ATGCACTGAA ATTAATCAAA
    GAGAGTGAGT ACCTGTTCAG TCATTGTTAC AGCCCTGTTA TATGTAGATT TGTTTGTTTT
    CTCTGTGAGA CAGTACTTGA AATGGGAGAC AAAGGCCTTC CTTCAACTCT TACTACACTT
    TTCCTGAAAT TTGTTCAGCA AAAGATAATA CCTATGCAAA CAGATGTTAC AGCTGTGCAA
    AATCAAAAGT GCCTTGCTAC ACTAGCCCGT ATAGCCTGGT ATCTTGGAGA AAAGCACCAA
    AGTACCATGA ACAGTGATAT TCTTCCTTCT AAGGAACTTA AAGAATTTGC TCTGAAATAT
    GGATTTTTCC TGCCATTTGC ATTCCCCAAA CATTCAGATA CTGAGGAGGA GGAACTTGGG
    ACCACATTCT CCGATTTTGT CATTCAGAAT TTCTTGGGTG CGCTTCACCT TGTATTAGCA
    GAAGACGTGA AGGATAAAAG TCTAACAAAG TACCTGTCTT TTCCATCCAA GAAGAAAAAG
    CCTTATAACT GGTTAGACTT AGTGCCTCGA TTTTTGGCTG GATTGTTGTT CCTCCAGGAT
    GATGCCTACT TCTGCTCCCT TTCTAATAAG GAAATAAAAC AATCAACCAA GAAGCAGAAA
    ACACTCCTGA AATATGTTAG AAGGTTGCAG ATAAATGACC TCTGTCCAGA GAGGTTACTC
    GAGCTTTTAC ACTGCATATA TGAAACACAA TACAATTATC TGTTGCAGCA TGTGACCTTA
    AGGCTCAAGA CAGACCTGTC TTTCCATGGC ATTTTTATTA CACCACCAGA TGTTCATGTA
    CTTTACTCTA CTTTAAAAAG GTCAAGAAAA GAGTTTTCCT TGGATTTGCA AAACAGCAAC
    ATTGACATGC AGGGGCTAAA AGACTTGGTT GGCCTGAAGA ATGTGGCATC ATTCAGGGCC
    TCCCTTGGTG ATACAATCAG GCTATGGAAA TACTTAGAAC AGACAAAAGA CTATGAACTG
    CTGAAACTGT CAACAGAAAA ATTTGTTCTC GATCCCTTTA AGGCAAAGAC AATGAAGGAT
    ATCAGTGACC TTTCAGACCT TGTAGAAATG CAGGAGATGA TCAGTTGCAT GCAAGATGCC
    TCTGGTTGCA GCAGCTATGA AATTCCTGCT ATAAAGAACC TGAGAAAAAT AGAATTTGCT
    CTAGGTCCAG CATATGGCCT TCAGGGATTT CTAAAACTTG TGGAAATTCT GCCGTCATTT
    CCATCACTTC AGCATTTAGA CCTTGATGCT CTGAGTGAAA ATGGCATAGG AGATGAAGGA
    GCAAAGAGTC TATCTGAAGT CTTTCCAACA CTGAGATCAC TGGAAATATT GAACTTATCA
    CAGAATAAGA TAACAGATGT GGGTGCAGAG AAACTAGCTA CAACTCTTCC TGCCTTATCT
    TCATTAACAA CACTAAGCTT GTACAATAAT AACATTTGTG ATTTTGGAGC AGAAAATCTT
    GCAAAAGTTC TTCATGCGAT GGCATCTTTA AGAGTGCTAG ATGTTCAGTA TAACAAAATA
    ACTGGTGTTG GAGCCCAACA GCTGACTGAC AGCCTACGAA AATGCCCCCA TATAAAAAAC
    TTGTTGATAT GGAATCCTAC AATTCCTTAT GGAGTTCTTG AACACCTTCA GCAGCTGGAC
    TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325145.1
    CDS55..3552
    Translation

    Target ORF information:

    RefSeq Version XM_027469344.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X6, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469344.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGAATCTTT TTAAGGAGAT CCTGCCTAGA ATAAGGAAGA TTCTTTCAGG TGCTACAGCT 
    TCTGATGACC ATGCATTGCT TAACCTCATG CTGAAAGAAC ATGTGATATC CAAGGAGTAC
    CATCAGGCCT TGCTCCACGA AAAAGACAGA GAGGACCTTG CAAGGAAGAT TTCTCTGACA
    TTTGTGGAGA AATGGGACAT GTATTGGAAC ACTTTGATTC CCCACTCTTG TTTAAACCTC
    TGTGGCAGTA GACCTCAAAA CATCATAGAT AATGAGCCAA CAGGAACCAA GCACATGTCT
    GACAGCAAGA GACAAATCAT GGATTCAGCA TTGGTGTGTG AAAATGGCTA TCTTGATTTG
    CTGCACAGTG ACATCGATCC AGTGCATCTG TTTACTCTCT TAGACCCTAA GCCATCTGGA
    AATGAAGAGA GTGACTTGTT TGCAGATTCT GAAATTGATG CCAGCAATTA TGATCAGTTG
    AATAGTATGG ATTTCCTGTG TACAGTGGAA AATGATGAAA ATGGAGATGA ATTGTATCCC
    TCTTCCAATG CCAGAGAAGC TTATGCTAGA ATAGCTGAAT TAGCAGAATA TGTGCTCAAA
    GATCAGCAGG AGAAGCAAGT GGAAGATAGT TTTGCAGGGA GCCTTATTTT GGATGAAATG
    ACTGCTGAAA ACACTGAGAT ATATACTGAT GTAAAGATGC AGAAATGTCA CAAAAGAACA
    TTTTTAGGCT CCATAGAGAG TTGTGCTGAT GTTTCAGAAC CCAAATACAA GAAAATTGTT
    TCAGGATCTT CAGCACCTTT GATTCCAGAG TGTCTACCCT TTGGCATGAA AGACAAACAA
    GAGAATGTAG ACTTTGCAGA TCTTGCTCAG CAGAAAAATA ATTTTTTAAT AGGAAATGGC
    ACATCAAGTA TTATAACATA TCCAGCACTG ACTACCTCCA CTGAAACAAT GTTTTCCCCG
    AGTTTTCCAG TTAATGTATG TGGCTTAGAA ATATTCAAAG AAGTCCAAGT TCCTCTAATT
    CCTTCTGAAG AACTTTTCAA AAGACCAAGG TCAGTGGAAG TCTTCTGTAG AGCGCTTAAG
    GATTACTTTG GAGACATATG CAAATATGTG GCCATGGAGC GTGAAGTGAC TCTTGATCAC
    TTGTTTATTG ATGGTACACT TGTGCAAAAC CAAATTGAAA CCAAGACTGG AAAGCACAGT
    GTAAAAGCAA TGGAAAAGGA GCCGGTAACT TACAATCTAC AATGGAAGGA AAAGGCATCA
    CTTGAAAGAA GCCAAATATT TCAAATCCCA GGAGGTAAAG ATTTAGAGAC TAAAGTGATT
    GTGGTGCTGG GAAAAGCAGG AATGGGCAAA AGCATTCTTG TACAGAAGAT CTGTCAGGAC
    TGGTCCAATG GAGAGTTTCC TCAGTTTGAA TTTCTCTTTT GGTTTGACTG CAAACAAATA
    AGCTTGCCTG AGAAGTGTTA CAGCTTGAAG GATCTGCTTC TTGATTTTTT TGTAAAACCT
    CAAGAGGGAA GCAACGAAAT CTTTGAGTAC ATATTGCAAA ATCCTGCTAA AGTCCTTCTG
    GTTTTTGATG GTTTTCAAGG GTTGCATGAC CATGAGAATT TTCCTCGTTG CTCAGACAGA
    CAGCCTGACA AAGGCTTGTA CAATATAAAG GAGCTGCTTT CAGGACTTAT CCAAAAAAAA
    ATATTCAGTG GCTGTACTTT ATTACTTACA GGAAGACCAA AAGACAAGGT GAACCAGTAT
    GTGTCCAAAG TGGATAAGAC TATTGAAATA GTAGGATTCT CTCCTCAGCA GAGAGAATTG
    TACATAACCA AATACTTTGA AGGATTACCC TACTGTGATA ATGCACTGAA ATTAATCAAA
    GAGAGTGAGT ACCTGTTCAG TCATTGTTAC AGCCCTGTTA TATGTAGATT TGTTTGTTTT
    CTCTGTGAGA CAGTACTTGA AATGGGAGAC AAAGGCCTTC CTTCAACTCT TACTACACTT
    TTCCTGAAAT TTGTTCAGCA AAAGATAATA CCTATGCAAA CAGATGTTAC AGCTGTGCAA
    AATCAAAAGT GCCTTGCTAC ACTAGCCCGT ATAGCCTGGT ATCTTGGAGA AAAGCACCAA
    AGTACCATGA ACAGTGATAT TCTTCCTTCT AAGGAACTTA AAGAATTTGC TCTGAAATAT
    GGATTTTTCC TGCCATTTGC ATTCCCCAAA CATTCAGATA CTGAGGAGGA GGAACTTGGG
    ACCACATTCT CCGATTTTGT CATTCAGAAT TTCTTGGGTG CGCTTCACCT TGTATTAGCA
    GAAGACGTGA AGGATAAAAG TCTAACAAAG TACCTGTCTT TTCCATCCAA GAAGAAAAAG
    CCTTATAACT GGTTAGACTT AGTGCCTCGA TTTTTGGCTG GATTGTTGTT CCTCCAGGAT
    GATGCCTACT TCTGCTCCCT TTCTAATAAG GAAATAAAAC AATCAACCAA GAAGCAGAAA
    ACACTCCTGA AATATGTTAG AAGGTTGCAG ATAAATGACC TCTGTCCAGA GAGGTTACTC
    GAGCTTTTAC ACTGCATATA TGAAACACAA TACAATTATC TGTTGCAGCA TGTGACCTTA
    AGGCTCAAGA CAGACCTGTC TTTCCATGGC ATTTTTATTA CACCACCAGA TGTTCATGTA
    CTTTACTCTA CTTTAAAAAG GTCAAGAAAA GAGTTTTCCT TGGATTTGCA AAACAGCAAC
    ATTGACATGC AGGGGCTAAA AGACTTGGTT GGCCTGAAGA ATGTGGCATC ATTCAGGGCC
    TCCCTTGGTG ATACAATCAG GCTATGGAAA TACTTAGAAC AGACAAAAGA CTATGAACTG
    CTGAAACTGT CAACAGAAAA ATTTGTTCTC GATCCCTTTA AGGCAAAGAC AATGAAGGAT
    ATCAGTGACC TTTCAGACCT TGTAGAAATG CAGGAGATGA TCAGTTGCAT GCAAGATGCC
    TCTGGTTGCA GCAGCTATGA AATTCCTGCT ATAAAGAACC TGAGAAAAAT AGAATTTGCT
    CTAGGTCCAG CATATGGCCT TCAGGGATTT CTAAAACTTG TGGAAATTCT GCCGTCATTT
    CCATCACTTC AGCATTTAGA CCTTGATGCT CTGAGTGAAA ATGGCATAGG AGATGAAGGA
    GCAAAGAGTC TATCTGAAGT CTTTCCAACA CTGAGATCAC TGGAAATATT GAACTTATCA
    CAGAATAAGA TAACAGATGT GGGTGCAGAG AAACTAGCTA CAACTCTTCC TGCCTTATCT
    TCATTAACAA CACTAAGCTT GTACAATAAT AACATTTGTG ATTTTGGAGC AGAAAATCTT
    GCAAAAGTTC TTCATGCGAT GGCATCTTTA AGAGTGCTAG ATGTTCAGTA TAACAAAATA
    ACTGGTGTTG GAGCCCAACA GCTGACTGAC AGCCTACGAA AATGCCCCCA TATAAAAAAC
    TTGTTGATAT GGAATCCTAC AATTCCTTAT GGAGTTCTTG AACACCTTCA GCAGCTGGAC
    TCGAGGATCA GTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166458
    Clone ID Related Accession (Same CDS sequence) XM_027469345.1 , XM_027469346.1 , XM_027469347.1
    Accession Version XM_027469345.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3330bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X7
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325146.1
    CDS431..3760
    Translation

    Target ORF information:

    RefSeq Version XM_027469345.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X7, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469345.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166458
    Clone ID Related Accession (Same CDS sequence) XM_027469345.1 , XM_027469346.1 , XM_027469347.1
    Accession Version XM_027469346.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3330bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X7
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325147.1
    CDS120..3449
    Translation

    Target ORF information:

    RefSeq Version XM_027469346.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X8, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469346.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OAn166458
    Clone ID Related Accession (Same CDS sequence) XM_027469345.1 , XM_027469346.1 , XM_027469347.1
    Accession Version XM_027469347.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3330bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-12-19
    Organism Anas platyrhynchos(mallard)
    Product MHC class II transactivator isoform X7
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040060.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_027325148.1
    CDS261..3590
    Translation

    Target ORF information:

    RefSeq Version XM_027469347.1
    Organism Anas platyrhynchos(mallard)
    Definition Anas platyrhynchos class II major histocompatibility complex transactivator (CIITA), transcript variant X9, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_027469347.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGGATTCAG CATTGGTGTG TGAAAATGGC TATCTTGATT TGCTGCACAG TGACATCGAT 
    CCAGTGCATC TGTTTACTCT CTTAGACCCT AAGCCATCTG GAAATGAAGA GAGTGACTTG
    TTTGCAGATT CTGAAATTGA TGCCAGCAAT TATGATCAGT TGAATAGTAT GGATTTCCTG
    TGTACAGTGG AAAATGATGA AAATGGAGAT GAATTGTATC CCTCTTCCAA TGCCAGAGAA
    GCTTATGCTA GAATAGCTGA ATTAGCAGAA TATGTGCTCA AAGATCAGCA GGAGAAGCAA
    GTGGAAGATA GTTTTGCAGG GAGCCTTATT TTGGATGAAA TGACTGCTGA AAACACTGAG
    ATATATACTG ATGTAAAGAT GCAGAAATGT CACAAAAGAA CATTTTTAGG CTCCATAGAG
    AGTTGTGCTG ATGTTTCAGA ACCCAAATAC AAGAAAATTG TGGATGCCCC TGCAGTGTCT
    ATAAGGAATG GCAGTTTCTT GGCTATGCCT CACAGCAGCC ATCCAGCTAG CTCCACCTCG
    CTAACTCACC AGCACATGTC CTTTTCTGTT CCCGCTATCA ATGCACTGGG AAGAAGTTTT
    GTAATTCCTG TTTCAGGATC TTCAGCACCT TTGATTCCAG AGTGTCTACC CTTTGGCATG
    AAAGACAAAC AAGAGAATGT AGACTTTGCA GATCTTGCTC AGCAGAAAAA TAATTTTTTA
    ATAGGAAATG GCACATCAAG TATTATAACA TATCCAGCAC TGACTACCTC CACTGAAACA
    ATGTTTTCCC CGAGTTTTCC AGTTAATGTA TGTGGCTTAG AAATATTCAA AGAAGTCCAA
    GTTCCTCTAA TTCCTTCTGA AGAACTTTTC AAAAGACCAA GGTCAGTGGA AGTCTTCTGT
    AGAGCGCTTA AGGATTACTT TGGAGACATA TGCAAATATG TGGCCATGGA GCGTGAAGTG
    ACTCTTGATC ACTTGTTTAT TGATGGTACA CTTGTGCAAA ACCAAATTGA AACCAAGACT
    GGAAAGCACA GTGTAAAAGC AATGGAAAAG GAGCCGGTAA CTTACAATCT ACAATGGAAG
    GAAAAGGCAT CACTTGAAAG AAGCCAAATA TTTCAAATCC CAGGAGGTAA AGATTTAGAG
    ACTAAAGTGA TTGTGGTGCT GGGAAAAGCA GGAATGGGCA AAAGCATTCT TGTACAGAAG
    ATCTGTCAGG ACTGGTCCAA TGGAGAGTTT CCTCAGTTTG AATTTCTCTT TTGGTTTGAC
    TGCAAACAAA TAAGCTTGCC TGAGAAGTGT TACAGCTTGA AGGATCTGCT TCTTGATTTT
    TTTGTAAAAC CTCAAGAGGG AAGCAACGAA ATCTTTGAGT ACATATTGCA AAATCCTGCT
    AAAGTCCTTC TGGTTTTTGA TGGTTTTCAA GGGTTGCATG ACCATGAGAA TTTTCCTCGT
    TGCTCAGACA GACAGCCTGA CAAAGGCTTG TACAATATAA AGGAGCTGCT TTCAGGACTT
    ATCCAAAAAA AAATATTCAG TGGCTGTACT TTATTACTTA CAGGAAGACC AAAAGACAAG
    GTGAACCAGT ATGTGTCCAA AGTGGATAAG ACTATTGAAA TAGTAGGATT CTCTCCTCAG
    CAGAGAGAAT TGTACATAAC CAAATACTTT GAAGGATTAC CCTACTGTGA TAATGCACTG
    AAATTAATCA AAGAGAGTGA GTACCTGTTC AGTCATTGTT ACAGCCCTGT TATATGTAGA
    TTTGTTTGTT TTCTCTGTGA GACAGTACTT GAAATGGGAG ACAAAGGCCT TCCTTCAACT
    CTTACTACAC TTTTCCTGAA ATTTGTTCAG CAAAAGATAA TACCTATGCA AACAGATGTT
    ACAGCTGTGC AAAATCAAAA GTGCCTTGCT ACACTAGCCC GTATAGCCTG GTATCTTGGA
    GAAAAGCACC AAAGTACCAT GAACAGTGAT ATTCTTCCTT CTAAGGAACT TAAAGAATTT
    GCTCTGAAAT ATGGATTTTT CCTGCCATTT GCATTCCCCA AACATTCAGA TACTGAGGAG
    GAGGAACTTG GGACCACATT CTCCGATTTT GTCATTCAGA ATTTCTTGGG TGCGCTTCAC
    CTTGTATTAG CAGAAGACGT GAAGGATAAA AGTCTAACAA AGTACCTGTC TTTTCCATCC
    AAGAAGAAAA AGCCTTATAA CTGGTTAGAC TTAGTGCCTC GATTTTTGGC TGGATTGTTG
    TTCCTCCAGG ATGATGCCTA CTTCTGCTCC CTTTCTAATA AGGAAATAAA ACAATCAACC
    AAGAAGCAGA AAACACTCCT GAAATATGTT AGAAGGTTGC AGATAAATGA CCTCTGTCCA
    GAGAGGTTAC TCGAGCTTTT ACACTGCATA TATGAAACAC AATACAATTA TCTGTTGCAG
    CATGTGACCT TAAGGCTCAA GACAGACCTG TCTTTCCATG GCATTTTTAT TACACCACCA
    GATGTTCATG TACTTTACTC TACTTTAAAA AGGTCAAGAA AAGAGTTTTC CTTGGATTTG
    CAAAACAGCA ACATTGACAT GCAGGGGCTA AAAGACTTGG TTGGCCTGAA GAATGTGGCA
    TCATTCAGGG CCTCCCTTGG TGATACAATC AGGCTATGGA AATACTTAGA ACAGACAAAA
    GACTATGAAC TGCTGAAACT GTCAACAGAA AAATTTGTTC TCGATCCCTT TAAGGCAAAG
    ACAATGAAGG ATATCAGTGA CCTTTCAGAC CTTGTAGAAA TGCAGGAGAT GATCAGTTGC
    ATGCAAGATG CCTCTGGTTG CAGCAGCTAT GAAATTCCTG CTATAAAGAA CCTGAGAAAA
    ATAGAATTTG CTCTAGGTCC AGCATATGGC CTTCAGGGAT TTCTAAAACT TGTGGAAATT
    CTGCCGTCAT TTCCATCACT TCAGCATTTA GACCTTGATG CTCTGAGTGA AAATGGCATA
    GGAGATGAAG GAGCAAAGAG TCTATCTGAA GTCTTTCCAA CACTGAGATC ACTGGAAATA
    TTGAACTTAT CACAGAATAA GATAACAGAT GTGGGTGCAG AGAAACTAGC TACAACTCTT
    CCTGCCTTAT CTTCATTAAC AACACTAAGC TTGTACAATA ATAACATTTG TGATTTTGGA
    GCAGAAAATC TTGCAAAAGT TCTTCATGCG ATGGCATCTT TAAGAGTGCT AGATGTTCAG
    TATAACAAAA TAACTGGTGT TGGAGCCCAA CAGCTGACTG ACAGCCTACG AAAATGCCCC
    CATATAAAAA ACTTGTTGAT ATGGAATCCT ACAATTCCTT ATGGAGTTCT TGAACACCTT
    CAGCAGCTGG ACTCGAGGAT CAGTGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.