LOC18446596 cDNA ORF clone, Amborella trichopoda

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC18446596
Entrez Gene ID	18446596
Full Name	3-dehydroquinate synthase, chloroplastic
Gene Type	protein-coding
Organism	Amborella trichopoda

mRNA and Protein(s)

mRNA	Protein	Name
XM_006856711.3	XP_006856773.1	3-dehydroquinate synthase, chloroplastic isoform X1
XM_020675059.1	XP_020530718.1	3-dehydroquinate synthase, chloroplastic isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC18446596 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18446596 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAm32828	XM_006856711.3 Latest version!	Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OAm32829	XM_020675059.1 Latest version!	Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC18446596 ( XM_006856711.3 ) cDNA ORF clone, Amborella trichopoda -> XP_006856773.1 Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OAm32828
Clone ID Related Accession (Same CDS sequence)	XM_006856711.3
Accession Version	XM_006856711.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-03
Organism	Amborella trichopoda
Product	3-dehydroquinate synthase, chloroplastic isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006500178.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 4, 2017 this sequence version replaced XM_006856711.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Amborella trichopoda Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCTT CTTCATCTCC ATCTCCATCT CCTTCCACCC TCCTCTTTCG TTCCAAGGCC 
TCGGAGCGCT TCATTCCTTA TACTGAAAGG ACCTCCATTT CTTTTCGATC CCCCATCACG 
GGCTCGAAGA AGAATCCATT ATTCTGCTCC GGAATTAAGA AGACCAATTC TCGAATTCTA 
CTGGAAATTG CGGCGAGTGC GGCTCCAATC GTGGAGACGA CGAAGCCCTC GAGCGCGAAT 
GCCCCCACGA TAGTGGATGT GGATTTGGGG AACAGAAGCT ATCCTATATA TATCGGCCCG 
GGTTTGCTTG ATCAGCCTGA TCTTCTTCAG AGGCATGTTA AGGGAAAGAG AGTCCTTATT 
GTAACAAATA CAACTGTTGC TCCATTATAC CTTGAGAAAG TTATCAGTGC TTTAACTTAT 
GGCAACTCTG GAATTTCTGT AGAGCATGTG ATCTTACCTG ATGGAGAGAA ATACAAAGAC 
ATGGACACCC TGATGAAGGT GTTTGACAAG GCTATTGAGT CCCGAATGGA TCGAAAGTGT 
ACATTTGTGG CTCTTGGAGG GGGTGTAATT GGTGACATGT GTGGCTTTGC TGCTGCTGCT 
TTTCTTCGTG GTGTCAATTT CATTCAGATT CCAACAACCC TTATGGCTCA GGTGGATTCC 
TCTGTAGGTG GAAAAACTGG AATAAATCAT CCATTGGGTA AGAACTTGAT TGGAGCATTC 
TTCCAACCAC AATGTGTACT AATCGATACA GATACACTGA ACACGCTACC AGACAGAGAA 
TTAGCATCTG GTATTGCTGA AGTGGTGAAG TATGGCCTGA TTAGGGATGC AGAGTTCTTT 
GAGTGGCAAG AGAAAAATAT GCAAGCCTTA TTAGGAAGGG ACCCTAGTGC ACTGGCATAT 
GCCATCAAAC GTTCTTGTGA GAATAAAGCT GAGGTTGTTT CCTTAGATGA GAAGGAGAGT 
GGACTCCGTG CAACTCTGAA CTTAGGTCAT ACATTTGGTC ATGCAATAGA AGCTGGTCTT 
GGATATGGGG AGTGGTTGCA TGGGGAAGCT GTCGCTGCTG GAACGGTCAT GGCCGTGGAC 
ATGTCCTATC GTCTTGGCTG GATTGATGAT TCAATTGTGA GGCGGGTGAT TAATATCCTA 
GAGCAAGCCA AGGTTCCCAC CGCTCCACCT GATATTATGA CCGTGGAGAA ATTCAAGACC 
ATAATGGCTG TTGATAAGAA GGTGGCTGAT GGCTTGCTAA GACTCATCCT TCTCAAGGGC 
CCTCTTGGTA ATTGTGTTTT CACAGGAGAT TATGATAACA AAGCTCTTGA AGAAACTCTT 
CGGGCCTTCT GTGAGTCTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006856773.1
CDS	219..1559
Translation	MAASSSPSPSPSTLLFRSKASERFIPYTERTSISFRSPITGSKKNPLFCSGIKKTNSRILLEIAASAAPIVETTKPSSANAPTIVDVDLGNRSYPIYIGPGLLDQPDLLQRHVKGKRVLIVTNTTVAPLYLEKVISALTYGNSGISVEHVILPDGEKYKDMDTLMKVFDKAIESRMDRKCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFFQPQCVLIDTDTLNTLPDRELASGIAEVVKYGLIRDAEFFEWQEKNMQALLGRDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIEAGLGYGEWLHGEAVAAGTVMAVDMSYRLGWIDDSIVRRVINILEQAKVPTAPPDIMTVEKFKTIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDNKALEETLRAFCES

Target ORF information:

RefSeq Version	XM_006856711.3
Organism	Amborella trichopoda
Definition	Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006856711.3

ORF Insert Sequence:

ATGGCTGCTT CTTCATCTCC ATCTCCATCT CCTTCCACCC TCCTCTTTCG TTCCAAGGCC 
TCGGAGCGCT TCATTCCTTA TACTGAAAGG ACCTCCATTT CTTTTCGATC CCCCATCACG 
GGCTCGAAGA AGAATCCATT ATTCTGCTCC GGAATTAAGA AGACCAATTC TCGAATTCTA 
CTGGAAATTG CGGCGAGTGC GGCTCCAATC GTGGAGACGA CGAAGCCCTC GAGCGCGAAT 
GCCCCCACGA TAGTGGATGT GGATTTGGGG AACAGAAGCT ATCCTATATA TATCGGCCCG 
GGTTTGCTTG ATCAGCCTGA TCTTCTTCAG AGGCATGTTA AGGGAAAGAG AGTCCTTATT 
GTAACAAATA CAACTGTTGC TCCATTATAC CTTGAGAAAG TTATCAGTGC TTTAACTTAT 
GGCAACTCTG GAATTTCTGT AGAGCATGTG ATCTTACCTG ATGGAGAGAA ATACAAAGAC 
ATGGACACCC TGATGAAGGT GTTTGACAAG GCTATTGAGT CCCGAATGGA TCGAAAGTGT 
ACATTTGTGG CTCTTGGAGG GGGTGTAATT GGTGACATGT GTGGCTTTGC TGCTGCTGCT 
TTTCTTCGTG GTGTCAATTT CATTCAGATT CCAACAACCC TTATGGCTCA GGTGGATTCC 
TCTGTAGGTG GAAAAACTGG AATAAATCAT CCATTGGGTA AGAACTTGAT TGGAGCATTC 
TTCCAACCAC AATGTGTACT AATCGATACA GATACACTGA ACACGCTACC AGACAGAGAA 
TTAGCATCTG GTATTGCTGA AGTGGTGAAG TATGGCCTGA TTAGGGATGC AGAGTTCTTT 
GAGTGGCAAG AGAAAAATAT GCAAGCCTTA TTAGGAAGGG ACCCTAGTGC ACTGGCATAT 
GCCATCAAAC GTTCTTGTGA GAATAAAGCT GAGGTTGTTT CCTTAGATGA GAAGGAGAGT 
GGACTCCGTG CAACTCTGAA CTTAGGTCAT ACATTTGGTC ATGCAATAGA AGCTGGTCTT 
GGATATGGGG AGTGGTTGCA TGGGGAAGCT GTCGCTGCTG GAACGGTCAT GGCCGTGGAC 
ATGTCCTATC GTCTTGGCTG GATTGATGAT TCAATTGTGA GGCGGGTGAT TAATATCCTA 
GAGCAAGCCA AGGTTCCCAC CGCTCCACCT GATATTATGA CCGTGGAGAA ATTCAAGACC 
ATAATGGCTG TTGATAAGAA GGTGGCTGAT GGCTTGCTAA GACTCATCCT TCTCAAGGGC 
CCTCTTGGTA ATTGTGTTTT CACAGGAGAT TATGATAACA AAGCTCTTGA AGAAACTCTT 
CGGGCCTTCT GTGAGTCTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC18446596 ( XM_020675059.1 ) cDNA ORF clone, Amborella trichopoda -> XP_020530718.1 Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OAm32829
Clone ID Related Accession (Same CDS sequence)	XM_020675059.1
Accession Version	XM_020675059.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-03
Organism	Amborella trichopoda
Product	3-dehydroquinate synthase, chloroplastic isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006500178.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Amborella trichopoda Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCTT CTTCATCTCC ATCTCCATCT CCTTCCACCC TCCTCTTTCG TTCCAAGGCC 
TCGGAGCGCT TCATTCCTTA TACTGAAAGG ACCTCCATTT CTTTTCGATC CCCCATCACG 
GGCTCGAAGA AGAATCCATT ATTCTGCTCC GGAATTAAGA AGACCAATTC TCGAATTCTA 
CTGGAAATTG CGGCGAGTGC GGCTCCAATC GTGGAGACGA CGAAGCCCTC GAGCGCGAAT 
GCCCCCACGA TAGTGGATGT GGATTTGGGG AACAGAAGCT ATCCTATATA TATCGGCCCG 
GGTTTGCTTG ATCAGCCTGA TCTTCTTCAG AGGCATGTTA AGGGAAAGAG AGTCCTTATT 
GTAACAAATA CAACTGTTGC TCCATTATAC CTTGAGAAAG TTATCAGTGC TTTAACTTAT 
GGCAACTCTG GAATTTCTGT AGAGCATGTG ATCTTACCTG ATGGAGAGAA ATACAAAGAC 
ATGGACACCC TGATGAAGGT GTTTGACAAG GCTATTGAGT CCCGAATGGA TCGAAAGTGT 
ACATTTGTGG CTCTTGGAGG GGGTGTAATT GGTGACATGT GTGGCTTTGC TGCTGCTGCT 
TTTCTTCGTG GTGTCAATTT CATTCAGATT CCAACAACCC TTATGGCTCA GGTGGATTCC 
TCTGTAGGTG GAAAAACTGG AATAAATCAT CCATTGGGTA AGAACTTGAT TGGAGCATTC 
TTCCAACCAC AATGTGTACT AATCGATACA GATACACTGA ACACGCTACC AGACAGAGAA 
TTAGCATCTG GTATTGCTGA AGTGGTGAAG TATGGCCTGA TTAGGGATGC AGAGTTCTTT 
GAGTGGCAAG AGAAAAATAT GCAAGCCTTA TTAGGAAGGG ACCCTAGTGC ACTGGCATAT 
GCCATCAAAC GTTCTTGTGA GAATAAAGCT GAGGTTGTTT CCTTAGATGA GAAGGAGAGT 
GGACTCCGTG CAACTCTGAA CTTAGGTCAT ACATTTGGTC ATGTCATGGC CGTGGACATG 
TCCTATCGTC TTGGCTGGAT TGATGATTCA ATTGTGAGGC GGGTGATTAA TATCCTAGAG 
CAAGCCAAGG TTCCCACCGC TCCACCTGAT ATTATGACCG TGGAGAAATT CAAGACCATA 
ATGGCTGTTG ATAAGAAGGT GGCTGATGGC TTGCTAAGAC TCATCCTTCT CAAGGGCCCT 
CTTGGTAATT GTGTTTTCAC AGGAGATTAT GATAACAAAG CTCTTGAAGA AACTCTTCGG 
GCCTTCTGTG AGTCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020530718.1
CDS	222..1499
Translation	MAASSSPSPSPSTLLFRSKASERFIPYTERTSISFRSPITGSKKNPLFCSGIKKTNSRILLEIAASAAPIVETTKPSSANAPTIVDVDLGNRSYPIYIGPGLLDQPDLLQRHVKGKRVLIVTNTTVAPLYLEKVISALTYGNSGISVEHVILPDGEKYKDMDTLMKVFDKAIESRMDRKCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFFQPQCVLIDTDTLNTLPDRELASGIAEVVKYGLIRDAEFFEWQEKNMQALLGRDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHVMAVDMSYRLGWIDDSIVRRVINILEQAKVPTAPPDIMTVEKFKTIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDNKALEETLRAFCES

Target ORF information:

RefSeq Version	XM_020675059.1
Organism	Amborella trichopoda
Definition	Amborella trichopoda 3-dehydroquinate synthase, chloroplastic (LOC18446596), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020675059.1

ORF Insert Sequence:

ATGGCTGCTT CTTCATCTCC ATCTCCATCT CCTTCCACCC TCCTCTTTCG TTCCAAGGCC 
TCGGAGCGCT TCATTCCTTA TACTGAAAGG ACCTCCATTT CTTTTCGATC CCCCATCACG 
GGCTCGAAGA AGAATCCATT ATTCTGCTCC GGAATTAAGA AGACCAATTC TCGAATTCTA 
CTGGAAATTG CGGCGAGTGC GGCTCCAATC GTGGAGACGA CGAAGCCCTC GAGCGCGAAT 
GCCCCCACGA TAGTGGATGT GGATTTGGGG AACAGAAGCT ATCCTATATA TATCGGCCCG 
GGTTTGCTTG ATCAGCCTGA TCTTCTTCAG AGGCATGTTA AGGGAAAGAG AGTCCTTATT 
GTAACAAATA CAACTGTTGC TCCATTATAC CTTGAGAAAG TTATCAGTGC TTTAACTTAT 
GGCAACTCTG GAATTTCTGT AGAGCATGTG ATCTTACCTG ATGGAGAGAA ATACAAAGAC 
ATGGACACCC TGATGAAGGT GTTTGACAAG GCTATTGAGT CCCGAATGGA TCGAAAGTGT 
ACATTTGTGG CTCTTGGAGG GGGTGTAATT GGTGACATGT GTGGCTTTGC TGCTGCTGCT 
TTTCTTCGTG GTGTCAATTT CATTCAGATT CCAACAACCC TTATGGCTCA GGTGGATTCC 
TCTGTAGGTG GAAAAACTGG AATAAATCAT CCATTGGGTA AGAACTTGAT TGGAGCATTC 
TTCCAACCAC AATGTGTACT AATCGATACA GATACACTGA ACACGCTACC AGACAGAGAA 
TTAGCATCTG GTATTGCTGA AGTGGTGAAG TATGGCCTGA TTAGGGATGC AGAGTTCTTT 
GAGTGGCAAG AGAAAAATAT GCAAGCCTTA TTAGGAAGGG ACCCTAGTGC ACTGGCATAT 
GCCATCAAAC GTTCTTGTGA GAATAAAGCT GAGGTTGTTT CCTTAGATGA GAAGGAGAGT 
GGACTCCGTG CAACTCTGAA CTTAGGTCAT ACATTTGGTC ATGTCATGGC CGTGGACATG 
TCCTATCGTC TTGGCTGGAT TGATGATTCA ATTGTGAGGC GGGTGATTAA TATCCTAGAG 
CAAGCCAAGG TTCCCACCGC TCCACCTGAT ATTATGACCG TGGAGAAATT CAAGACCATA 
ATGGCTGTTG ATAAGAAGGT GGCTGATGGC TTGCTAAGAC TCATCCTTCT CAAGGGCCCT 
CTTGGTAATT GTGTTTTCAC AGGAGATTAT GATAACAAAG CTCTTGAAGA AACTCTTCGG 
GCCTTCTGTG AGTCTTAA