LOC107344239 cDNA ORF clone, Acropora digitifera

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107344239
Entrez Gene ID	107344239
Full Name	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
Gene Type	protein-coding
Organism	Acropora digitifera

mRNA and Protein(s)

mRNA	Protein	Name
XM_015909888.1	XP_015765374.1	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like

Pathways from BioSystems
Gene Ontology

The following LOC107344239 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107344239 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAc72532	XM_015909888.1 Latest version!	Acropora digitifera pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like (LOC107344239), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107344239 ( XM_015909888.1 ) cDNA ORF clone, Acropora digitifera -> XP_015765374.1 Acropora digitifera pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like (LOC107344239), mRNA.

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CloneID	OAc72532
Clone ID Related Accession (Same CDS sequence)	XM_015909888.1
Accession Version	XM_015909888.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3543bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-03-13
Organism	Acropora digitifera
Product	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015441280.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Acropora digitifera Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCCGACA TAGGTTTTGA TAGTTCGATC GATCGGCTGG AGGGTACGAG ATCTGTTGTT 
GGAGGTTTAA TAATAAAAGG TGACAGGAAT AAATCGAATT CAGCGTCAAG AGAAAGCATG 
CTTGGACTTG AAAAACTTGC TGAAGAGAAA AGGAAGAGGA AAATCGATGC AGGTGAGGAC 
AAACCGAAAC GACTTAAGCA TCTTTCGCCA AATCGAGGTA CAGACATCGA CGATTGGGAA 
AATAGCCGTG ATGAGGGACT CAGACCTCCA AGACATAGTA CTGGAAATAA GGACTGGAGG 
TCCAAATCTC GACATTATAG ATCTGCATTA GTGGAAACAC CATCCCACAC GGGTGGTGTA 
AACGAAGAAA TTAGGGAAAA GCAATTAAAA AGACTTGAAC GAGATCGTGA AACTAGAAGA 
GGTGGAGTTT ATGCGGAGTC GAGGCTGAGG GACAGAGATG GTAGACATAA AAAAAATGAC 
AGAAAGCATT ATAAAAACGG CGATAGGGAA AAGAGAAATT ATGGAACGAA TGAACAGAGT 
AGTCGGAGAT CCCATGACTA TGGTCGAAGT AACAAGGATT ACAGTTTTAA AGAGCCACTT 
TCAAGCAGGA ATGAATGGGA TGAGACACCA TACCGCAAAA GTCGTTCGTC AAGAGAGGAA 
GGAAATTCAA CCCCAAAGCA CAAGTCGAAA GATATCAGAA CTCCTTCTAG AAGTAGTTGG 
GATGATGAGG AGTCCACGCC CAGTAGATCA AAATGGGAGA TGGCATCTCC TGCAAGGTCA 
CTTATTAGTG AAGATGTGAG GAGTGAGCGC AGGTCACATC AAAGGATTGA TGATACTCCT 
ATGTTTACGC CAACACACAA ATACAATGTT TGGGAAGTTG ATCGACACAG CACAGGTGCC 
ACACCAAGGT TCTCCAAAGG AAAACGTTCT GCAAATGAGA AGGATTCATC AAGATTCCCA 
TCAGATGTTG ACAAAGAAGA ATGGGATGAA GAGCAAAAGA GGTTAGACCG GGCATGGTAT 
GACATGGACT CAGGCTATGA TGAAACCCAA AATCCATTTG CTGATGTCAG TGAAGAATAT 
ACAAAGAAGA AAGAAGAAAC CATGGCCAAG AAAGCAGTTA AAAGAATGTC TGCACAGCAA 
AGACAGATCA ACAAGGATAA TGACCTTTGG GAAACCAATA GAATGTTAAC AAGTGGTGTG 
GTGCAGAAAT TAGAAGTGGA TGATGATTTT GAGGAGGAAC AGGAAGCAAG AGTGCATCTA 
TTGGTTCATA ACATTGTCCC TCCTTTCTTG GATGGACGCA TTGTTTTCAC AAAACAGCCT 
GAACCAGTCA TTCCTGTTAA GGATTCTACA TCGGACATGG CAATGATTTC AAGGAAAGGC 
TGCCATGTTG TCCGCGTCCA TCGTGAACAG AAGGAGAGAC AGAAAGGACA ACAAAAGCAC 
TGGGAACTGG CTGGGACAAA ACTGGGAAAT ATTCTTGGTG TCAAGAAAGA GAAACTTCTG 
AATATAGTCA GAGATAATCA GGTTGTCATT GTCGTTGGTG AAACAGGATC AGGGAAGACA 
ACGCAACTCA CACAGTATAT GCATGAGGAT GGATATACGA ACTATGGCAT GATTGGTTGC 
ACCCAGCCTC GCCGAGTAGC CGCCATGTCT GTAGCTAAAC GTGTCAGTGA GGAGTTTGGT 
TGCAAACTTG GAGAAGAAGT TGGATACGCC ATTCGATTTG AAGACGTTAC CACAGAGACA 
ACTATGATAA AGTACATGAC GGATGGTATT CTCCTTCGTG AATCTCTGCG GGAGTCGGAC 
CTTGATCATT ACAGTGTCAT CATCATGGAT GAAGCGCACG AGAGATCACT TAACACTGAT 
GTACTCTTTG GTCTTCTAAG AGAGGTCATA TCTCGTCGGA GAGACATGAA ACTGATCGTA 
ACATCAGCAA CAATGGACGC CCAAAAGTTT GCCGATTTCT TTGGCAATGT CCCTACCTTT 
CAGATTCCTG GTCGTACATT TCCCGTTGAT ATATTTTTCA GCAAGAATGT GGTTGAAGAT 
TACGTAGATG GCGCTGTTAA GCAGGCCTTG CAGATCCACC TGACTCCCGC TAAAGGTGAC 
ATTTTGATCT TCATGCCTGG CCAAGAAGAT ATCGAAGTCA CTTGCGACCT CATAACTGAG 
CGCCTGGATG AAGTCGACGA GGCACCCCCG CTAGCTGTTT TGCCAATTTA CTCACAATTG 
CCATCCGATT TACAAGCGAA AATATTTCAG AAAGCACCAG ATGGCGTTAG GAAGTGTATC 
GTGGCTACCA ACATCGCAGA AACCTCACTG ACCGTGGATG GAATCATGTT TGTTGTGGAC 
TCTGGTTACT GCAAGTTGAA AGTATTTAAC CCCAAAATCG GTATGGATGC CCTTCAAGTG 
TACCCCATCA GCCAGGCTAA TGCAAATCAG CGATCCGGCC GTGCAGGAAG GACGGGACCT 
GGCCAGTGCT TCAGGCTTTT CACAGAAAGC TCCTATAAGA ACGAGTTGCT GGTTTCTACT 
GTACCTGAAA TTCAACGTAC GAATCTGGCC AATGTTGTTC TTCTTCTCAA GTCACTTGGA 
GTTCAAAATT TGTTGGAATT TCACTTTATG GATCCTCCAC CACAGGACAA CATCTTAAAT 
TCGATGTACC AGTTATGGAT TCTTGGAGCG CTGGATAACA CTGGTAGCCT GAATCCTTTG 
GGCCGACAAA TGGTCGAGTT TCCGTTGGAC CCCGCCTTGT CCAAAATGTT GATTATAGCA 
GTGGACATGG GCTGCAGTGA TGATACGCTG ACCATAGTTT CGATGTTGTC GGTGCCAGCC 
ATATTTTTTC GCCCCAAAGG ACGAGAGGAA GAGAGTGATG CTGCCAGAGA GAAGTTTGCA 
GTACCAGAAA GCGACCATCT AACTTACCTT AACGTCTATT TACAGTGGAA AAGCAACAAT 
TATTCAGGCC AGTGGTGCAG CGAACACTTT ATTCACATCA AAGCTATGCG AAAGGTTCGT 
GAGGTTCGTG GGCAGCTAAA AGATATCATG ATTCAACAGA AAATGTCGTT GAAATCTTGT 
GGCAATGACT GGGATGTCAT AAGAAAATGC ATTTGCTCGT CATATTTTCA TCAAGCCGCG 
AGGTTGAAGG GCATTGGAGA ATACGTGAAC ATGCGAACTG GAATGCCGTG TCACCTTCAC 
CCGACCAGTG CACTGTTCGG TATGGGATAC ACACCAGACT ACATTGTCTA CCACGAGTTG 
GTCATGACAT CCAAGGAATA CATGCAATGT GTTACAGCTG TGGATGGCAA TTGGCTGGCG 
GAGCTAGGGC CCATGTTTTA CACGGTGAAG GAATCAACGA AGACCAGATT GGAAAAACGA 
AGACGTGCAA AAGAAGACAT GTCGGCGATG GAAGAGGAGA TGGCTGCCGC CAGTGCGCAG 
ATGAAAGCCC GCGAAGAGGA AAATCTAACC AAGCAAACCC CGTCAGTAAG ATCACAAATC 
GTAACTCCAG GGCGAAAGCC CCCCGCAACT CCTCGTCGCA CGCCTTATAG ATTTGGATTG 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015765374.1
CDS	86..3628
Translation	MSDIGFDSSIDRLEGTRSVVGGLIIKGDRNKSNSASRESMLGLEKLAEEKRKRKIDAGEDKPKRLKHLSPNRGTDIDDWENSRDEGLRPPRHSTGNKDWRSKSRHYRSALVETPSHTGGVNEEIREKQLKRLERDRETRRGGVYAESRLRDRDGRHKKNDRKHYKNGDREKRNYGTNEQSSRRSHDYGRSNKDYSFKEPLSSRNEWDETPYRKSRSSREEGNSTPKHKSKDIRTPSRSSWDDEESTPSRSKWEMASPARSLISEDVRSERRSHQRIDDTPMFTPTHKYNVWEVDRHSTGATPRFSKGKRSANEKDSSRFPSDVDKEEWDEEQKRLDRAWYDMDSGYDETQNPFADVSEEYTKKKEETMAKKAVKRMSAQQRQINKDNDLWETNRMLTSGVVQKLEVDDDFEEEQEARVHLLVHNIVPPFLDGRIVFTKQPEPVIPVKDSTSDMAMISRKGCHVVRVHREQKERQKGQQKHWELAGTKLGNILGVKKEKLLNIVRDNQVVIVVGETGSGKTTQLTQYMHEDGYTNYGMIGCTQPRRVAAMSVAKRVSEEFGCKLGEEVGYAIRFEDVTTETTMIKYMTDGILLRESLRESDLDHYSVIIMDEAHERSLNTDVLFGLLREVISRRRDMKLIVTSATMDAQKFADFFGNVPTFQIPGRTFPVDIFFSKNVVEDYVDGAVKQALQIHLTPAKGDILIFMPGQEDIEVTCDLITERLDEVDEAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPKIGMDALQVYPISQANANQRSGRAGRTGPGQCFRLFTESSYKNELLVSTVPEIQRTNLANVVLLLKSLGVQNLLEFHFMDPPPQDNILNSMYQLWILGALDNTGSLNPLGRQMVEFPLDPALSKMLIIAVDMGCSDDTLTIVSMLSVPAIFFRPKGREEESDAAREKFAVPESDHLTYLNVYLQWKSNNYSGQWCSEHFIHIKAMRKVREVRGQLKDIMIQQKMSLKSCGNDWDVIRKCICSSYFHQAARLKGIGEYVNMRTGMPCHLHPTSALFGMGYTPDYIVYHELVMTSKEYMQCVTAVDGNWLAELGPMFYTVKESTKTRLEKRRRAKEDMSAMEEEMAAASAQMKAREEENLTKQTPSVRSQIVTPGRKPPATPRRTPYRFGL

Target ORF information:

RefSeq Version	XM_015909888.1
Organism	Acropora digitifera
Definition	Acropora digitifera pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like (LOC107344239), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015909888.1

ORF Insert Sequence:

ATGTCCGACA TAGGTTTTGA TAGTTCGATC GATCGGCTGG AGGGTACGAG ATCTGTTGTT 
GGAGGTTTAA TAATAAAAGG TGACAGGAAT AAATCGAATT CAGCGTCAAG AGAAAGCATG 
CTTGGACTTG AAAAACTTGC TGAAGAGAAA AGGAAGAGGA AAATCGATGC AGGTGAGGAC 
AAACCGAAAC GACTTAAGCA TCTTTCGCCA AATCGAGGTA CAGACATCGA CGATTGGGAA 
AATAGCCGTG ATGAGGGACT CAGACCTCCA AGACATAGTA CTGGAAATAA GGACTGGAGG 
TCCAAATCTC GACATTATAG ATCTGCATTA GTGGAAACAC CATCCCACAC GGGTGGTGTA 
AACGAAGAAA TTAGGGAAAA GCAATTAAAA AGACTTGAAC GAGATCGTGA AACTAGAAGA 
GGTGGAGTTT ATGCGGAGTC GAGGCTGAGG GACAGAGATG GTAGACATAA AAAAAATGAC 
AGAAAGCATT ATAAAAACGG CGATAGGGAA AAGAGAAATT ATGGAACGAA TGAACAGAGT 
AGTCGGAGAT CCCATGACTA TGGTCGAAGT AACAAGGATT ACAGTTTTAA AGAGCCACTT 
TCAAGCAGGA ATGAATGGGA TGAGACACCA TACCGCAAAA GTCGTTCGTC AAGAGAGGAA 
GGAAATTCAA CCCCAAAGCA CAAGTCGAAA GATATCAGAA CTCCTTCTAG AAGTAGTTGG 
GATGATGAGG AGTCCACGCC CAGTAGATCA AAATGGGAGA TGGCATCTCC TGCAAGGTCA 
CTTATTAGTG AAGATGTGAG GAGTGAGCGC AGGTCACATC AAAGGATTGA TGATACTCCT 
ATGTTTACGC CAACACACAA ATACAATGTT TGGGAAGTTG ATCGACACAG CACAGGTGCC 
ACACCAAGGT TCTCCAAAGG AAAACGTTCT GCAAATGAGA AGGATTCATC AAGATTCCCA 
TCAGATGTTG ACAAAGAAGA ATGGGATGAA GAGCAAAAGA GGTTAGACCG GGCATGGTAT 
GACATGGACT CAGGCTATGA TGAAACCCAA AATCCATTTG CTGATGTCAG TGAAGAATAT 
ACAAAGAAGA AAGAAGAAAC CATGGCCAAG AAAGCAGTTA AAAGAATGTC TGCACAGCAA 
AGACAGATCA ACAAGGATAA TGACCTTTGG GAAACCAATA GAATGTTAAC AAGTGGTGTG 
GTGCAGAAAT TAGAAGTGGA TGATGATTTT GAGGAGGAAC AGGAAGCAAG AGTGCATCTA 
TTGGTTCATA ACATTGTCCC TCCTTTCTTG GATGGACGCA TTGTTTTCAC AAAACAGCCT 
GAACCAGTCA TTCCTGTTAA GGATTCTACA TCGGACATGG CAATGATTTC AAGGAAAGGC 
TGCCATGTTG TCCGCGTCCA TCGTGAACAG AAGGAGAGAC AGAAAGGACA ACAAAAGCAC 
TGGGAACTGG CTGGGACAAA ACTGGGAAAT ATTCTTGGTG TCAAGAAAGA GAAACTTCTG 
AATATAGTCA GAGATAATCA GGTTGTCATT GTCGTTGGTG AAACAGGATC AGGGAAGACA 
ACGCAACTCA CACAGTATAT GCATGAGGAT GGATATACGA ACTATGGCAT GATTGGTTGC 
ACCCAGCCTC GCCGAGTAGC CGCCATGTCT GTAGCTAAAC GTGTCAGTGA GGAGTTTGGT 
TGCAAACTTG GAGAAGAAGT TGGATACGCC ATTCGATTTG AAGACGTTAC CACAGAGACA 
ACTATGATAA AGTACATGAC GGATGGTATT CTCCTTCGTG AATCTCTGCG GGAGTCGGAC 
CTTGATCATT ACAGTGTCAT CATCATGGAT GAAGCGCACG AGAGATCACT TAACACTGAT 
GTACTCTTTG GTCTTCTAAG AGAGGTCATA TCTCGTCGGA GAGACATGAA ACTGATCGTA 
ACATCAGCAA CAATGGACGC CCAAAAGTTT GCCGATTTCT TTGGCAATGT CCCTACCTTT 
CAGATTCCTG GTCGTACATT TCCCGTTGAT ATATTTTTCA GCAAGAATGT GGTTGAAGAT 
TACGTAGATG GCGCTGTTAA GCAGGCCTTG CAGATCCACC TGACTCCCGC TAAAGGTGAC 
ATTTTGATCT TCATGCCTGG CCAAGAAGAT ATCGAAGTCA CTTGCGACCT CATAACTGAG 
CGCCTGGATG AAGTCGACGA GGCACCCCCG CTAGCTGTTT TGCCAATTTA CTCACAATTG 
CCATCCGATT TACAAGCGAA AATATTTCAG AAAGCACCAG ATGGCGTTAG GAAGTGTATC 
GTGGCTACCA ACATCGCAGA AACCTCACTG ACCGTGGATG GAATCATGTT TGTTGTGGAC 
TCTGGTTACT GCAAGTTGAA AGTATTTAAC CCCAAAATCG GTATGGATGC CCTTCAAGTG 
TACCCCATCA GCCAGGCTAA TGCAAATCAG CGATCCGGCC GTGCAGGAAG GACGGGACCT 
GGCCAGTGCT TCAGGCTTTT CACAGAAAGC TCCTATAAGA ACGAGTTGCT GGTTTCTACT 
GTACCTGAAA TTCAACGTAC GAATCTGGCC AATGTTGTTC TTCTTCTCAA GTCACTTGGA 
GTTCAAAATT TGTTGGAATT TCACTTTATG GATCCTCCAC CACAGGACAA CATCTTAAAT 
TCGATGTACC AGTTATGGAT TCTTGGAGCG CTGGATAACA CTGGTAGCCT GAATCCTTTG 
GGCCGACAAA TGGTCGAGTT TCCGTTGGAC CCCGCCTTGT CCAAAATGTT GATTATAGCA 
GTGGACATGG GCTGCAGTGA TGATACGCTG ACCATAGTTT CGATGTTGTC GGTGCCAGCC 
ATATTTTTTC GCCCCAAAGG ACGAGAGGAA GAGAGTGATG CTGCCAGAGA GAAGTTTGCA 
GTACCAGAAA GCGACCATCT AACTTACCTT AACGTCTATT TACAGTGGAA AAGCAACAAT 
TATTCAGGCC AGTGGTGCAG CGAACACTTT ATTCACATCA AAGCTATGCG AAAGGTTCGT 
GAGGTTCGTG GGCAGCTAAA AGATATCATG ATTCAACAGA AAATGTCGTT GAAATCTTGT 
GGCAATGACT GGGATGTCAT AAGAAAATGC ATTTGCTCGT CATATTTTCA TCAAGCCGCG 
AGGTTGAAGG GCATTGGAGA ATACGTGAAC ATGCGAACTG GAATGCCGTG TCACCTTCAC 
CCGACCAGTG CACTGTTCGG TATGGGATAC ACACCAGACT ACATTGTCTA CCACGAGTTG 
GTCATGACAT CCAAGGAATA CATGCAATGT GTTACAGCTG TGGATGGCAA TTGGCTGGCG 
GAGCTAGGGC CCATGTTTTA CACGGTGAAG GAATCAACGA AGACCAGATT GGAAAAACGA 
AGACGTGCAA AAGAAGACAT GTCGGCGATG GAAGAGGAGA TGGCTGCCGC CAGTGCGCAG 
ATGAAAGCCC GCGAAGAGGA AAATCTAACC AAGCAAACCC CGTCAGTAAG ATCACAAATC 
GTAACTCCAG GGCGAAAGCC CCCCGCAACT CCTCGTCGCA CGCCTTATAG ATTTGGATTG 
TAA