Gene Symbol | OPA3 |
Entrez Gene ID | 107969761 |
Full Name | OPA3, outer mitochondrial membrane lipid metabolism regulator |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » OPA3 cDNA ORF clone
Gene Symbol | OPA3 |
Entrez Gene ID | 107969761 |
Full Name | OPA3, outer mitochondrial membrane lipid metabolism regulator |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016936223.2 | XP_016791712.1 | optic atrophy 3 protein isoform X1 |
NM_001361685.1 | NP_001348614.1 | optic atrophy 3 protein isoform 1 |
XM_016936224.1 | XP_016791713.1 | optic atrophy 3 protein isoform X2 |
XM_016936223.1 | XP_016791712.1 | optic atrophy 3 protein isoform X1 |
NM_001242408.2 | NP_001229337.2 | optic atrophy 3 protein isoform 2 |
XM_016936225.1 | XP_016791714.1 | optic atrophy 3 protein isoform X3 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following OPA3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPA3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc110423 | |
Clone ID Related Accession (Same CDS sequence) | NM_001361685.1 | |
Accession Version | NM_001361685.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 543bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-12 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NBAG03000106.1 and AK306057.1. On Mar 29, 2018 this sequence version replaced XM_016936224.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK306057.1, GABC01005383.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348614.1 |
CDS | 88..630 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001361685.1 |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc75866 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242408.2 , XM_016936225.1 | |
Accession Version | NM_001242408.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 540bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-12 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from GABF01003711.1 and NBAG03000106.1. On or before Mar 29, 2018 this sequence version replaced XM_016936225.1, NM_001242408.1. ##Evidence-Data-START## Transcript exon combination :: GABF01003711.1, GABE01003154.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229337.2 |
CDS | 88..627 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001242408.2 |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc75864 | |
Clone ID Related Accession (Same CDS sequence) | XM_016936223.2 , XM_016936223.1 | |
Accession Version | XM_016936223.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 570bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036898.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016936223.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCCCTT GGATGAATAT TAATTGTTGC AGGAGTGAGT CAGGATGCAG CATCAATTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016791712.1 |
CDS | 151..720 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016936223.2 |
1 | ATGTGCCCTT GGATGAATAT TAATTGTTGC AGGAGTGAGT CAGGATGCAG CATCAATTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc75864 | |
Clone ID Related Accession (Same CDS sequence) | XM_016936223.2 , XM_016936223.1 | |
Accession Version | XM_016936223.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 570bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006486.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCCCTT GGATGAATAT TAATTGTTGC AGGAGTGAGT CAGGATGCAG CATCAATTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016791712.1 |
CDS | 152..721 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016936223.1 |
1 | ATGTGCCCTT GGATGAATAT TAATTGTTGC AGGAGTGAGT CAGGATGCAG CATCAATTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc75865 | |
Clone ID Related Accession (Same CDS sequence) | XM_016936224.1 | |
Accession Version | XM_016936224.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 543bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006486.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016791713.1 |
CDS | 1143..1685 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016936224.1 |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc75866 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242408.2 , XM_016936225.1 | |
Accession Version | XM_016936225.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 540bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | optic atrophy 3 protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006486.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016791714.1 |
CDS | 1143..1682 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016936225.1 |
1 | ATGGTGGTGG GCGCGTTCCC TATGGCGAAG CTGCTATACT TGGGCATCCG GCAGGTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |