uqcrc2a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	uqcrc2a
Entrez Gene ID	436930
Full Name	ubiquinol-cytochrome c reductase core protein 2a
Synonyms	fb33d01,fc43c05,wu:fb33d01,wu:fc43c05,zgc:92453
General protein information	Preferred Names ubiquinol-cytochrome c reductase core protein 2a Names ubiquinol-cytochrome c reductase core protein II ubiquinol-cytochrome c reductase core protein IIa
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009299823.1	XP_009298098.1	ubiquinol-cytochrome c reductase core protein II isoform X1
NM_001002657.2	NP_001002657.2	ubiquinol-cytochrome c reductase core protein II

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Convergent extension movements and ciliary function are mediated by ofd1, a zebrafish orthologue of the human oral-facial-digital type 1 syndrome gene.
Ferrante MI, Romio L, Castro S, Collins JE, Goulding DA, Stemple DL, Woolf AS, Wilson SW
Human molecular genetics18(2)289-303(2009 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following uqcrc2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the uqcrc2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33541	NM_001002657.2 Latest version!	Danio rerio ubiquinol-cytochrome c reductase core protein 2a (uqcrc2a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa41097	XM_009299823.1 Latest version!	Danio rerio ubiquinol-cytochrome c reductase core protein IIa (uqcrc2a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

uqcrc2a ( NM_001002657.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002657.2 Danio rerio ubiquinol-cytochrome c reductase core protein 2a (uqcrc2a), mRNA.

Price & Availability↑

CloneID	ODa33541
Clone ID Related Accession (Same CDS sequence)	NM_001002657.2
Accession Version	NM_001002657.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1383bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	ubiquinol-cytochrome c reductase core protein II
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB969638.1, EH436572.1 and CT583687.16. On Jul 15, 2011 this sequence version replaced NM_001002657.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC076480.1, GDQH01002876.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGATGACGG GCTTCAGAGG TTTCACTCAT CTCTCCAGAC GCTGTTATGC TGCCGCCGCC 
AGGAGGAACA AGGCTCTAAC TGAACCTCTA AGCCATAAGT CTGCAGCTCC ACCAGTGCTC 
CAGCCACAGG ATGTCCAGGT GTCCAAGCTG CCCAGCGGTC TTGTGGTGGC CTCTCTGGAG 
AACTACTCCC CCGTCTCCAA AATCGGTGTG TTTGTGAAAG CCGGCAGCCG CTATGAGACT 
GCAGAAAACC TGGGCGTCAC GCACATGCTC AGATTAGCAG CGAATATGAC CACTAAAGGT 
GCGTCAGCCT TCAAGATCTG TCGCAGTCTG GAGGCTCTGG GTGCTAGTTT GAGTGTGACG 
TCTTCGAGGG AACACATGGT ATATTCCCTG GACTTTCTTA GAGATGATTT TGACGGTGTG 
ATCGAATACC TTGTGGATGT GACTACTGCT CCTGACTTCA GACCCTGGGA GTTGGCAGAT 
CTCACCCCGA GGGTCAAGAT CGACAAAGCC TTGGCTGAAC AGAGCCCACA GATAGGTGTC 
CTGGAGAAGC TGCATGAAGC TGCTTATAAA AACGCCTTGT CCAACTCGCT CTACTGTCCA 
GACATCATGC TGGGGAAGAT CAGTGTTGAT CATCTTCAGC AGTTCTTTGA CAATAATTAC 
ACCAGTGCAA GAATGGCTCT CGTTGGATTA GGGGTCAGTC ATGCGGCTCT GAAGACGGTC 
GGTGAGCGAT TCTTCGGTTC TCATAAAGGA GCCGGAGCAC CAGGAGCCAA AGCTGTGTAC 
CGCGGCGGTG AGCTGCGGGT TCAGGGCACT GGATCTCTGG TTCACGCTCT GCTGGCTTGT 
GAAGGAGCTG TGACGGGCTC AGCTGAGGCC AACGCCTTCA GTGTGCTGCA GAGGATTCTG 
GGAGCTGGAC CACATGTCAA GAGAGGATCC AACATCAGCA GCAAACTCAG CCAGGGCATC 
GCCAAGGCAA CCGCTCAGCC ATTTGACGCC ACAGCTTTCA GCACTACTTA CTCAGACTCG 
GGGCTCTTCG GGCTCTACAT CATCTCTCAA GCAGACTCGA CCCGCGAGGT CATCAGTTCG 
GCTGTGGCTC AGGTGACTGC TGTGGCGGAG GGAAAGCTGA CCACTGATGA CCTTACCAGA 
GCAAAGAATC AGCTGAAGGC AGATTATCTG ATGTCTCTGG AGAGTTCAGA CGTGCTGCTG 
GAGGAGCTGG GGGTTCAGCT TTTAAACAGC GGCGTCTACA GTTCACCACA GACTGTGACA 
CAAAGCATCG ACTCGGTGAC CTCCAGCGAC GTCCTCAAAG CTGCGAGGAG GTTTGTTGAA 
GGCCAGAAGA GCATGTCGAG TTGTGGATAT CTGGAAAACA CACCGTTTCT GGATGAGCTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002657.2
CDS	75..1457
Translation	MMTGFRGFTHLSRRCYAAAARRNKALTEPLSHKSAAPPVLQPQDVQVSKLPSGLVVASLENYSPVSKIGVFVKAGSRYETAENLGVTHMLRLAANMTTKGASAFKICRSLEALGASLSVTSSREHMVYSLDFLRDDFDGVIEYLVDVTTAPDFRPWELADLTPRVKIDKALAEQSPQIGVLEKLHEAAYKNALSNSLYCPDIMLGKISVDHLQQFFDNNYTSARMALVGLGVSHAALKTVGERFFGSHKGAGAPGAKAVYRGGELRVQGTGSLVHALLACEGAVTGSAEANAFSVLQRILGAGPHVKRGSNISSKLSQGIAKATAQPFDATAFSTTYSDSGLFGLYIISQADSTREVISSAVAQVTAVAEGKLTTDDLTRAKNQLKADYLMSLESSDVLLEELGVQLLNSGVYSSPQTVTQSIDSVTSSDVLKAARRFVEGQKSMSSCGYLENTPFLDEL

Target ORF information:

RefSeq Version	NM_001002657.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ubiquinol-cytochrome c reductase core protein 2a (uqcrc2a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002657.2

ORF Insert Sequence:

ATGATGACGG GCTTCAGAGG TTTCACTCAT CTCTCCAGAC GCTGTTATGC TGCCGCCGCC 
AGGAGGAACA AGGCTCTAAC TGAACCTCTA AGCCATAAGT CTGCAGCTCC ACCAGTGCTC 
CAGCCACAGG ATGTCCAGGT GTCCAAGCTG CCCAGCGGTC TTGTGGTGGC CTCTCTGGAG 
AACTACTCCC CCGTCTCCAA AATCGGTGTG TTTGTGAAAG CCGGCAGCCG CTATGAGACT 
GCAGAAAACC TGGGCGTCAC GCACATGCTC AGATTAGCAG CGAATATGAC CACTAAAGGT 
GCGTCAGCCT TCAAGATCTG TCGCAGTCTG GAGGCTCTGG GTGCTAGTTT GAGTGTGACG 
TCTTCGAGGG AACACATGGT ATATTCCCTG GACTTTCTTA GAGATGATTT TGACGGTGTG 
ATCGAATACC TTGTGGATGT GACTACTGCT CCTGACTTCA GACCCTGGGA GTTGGCAGAT 
CTCACCCCGA GGGTCAAGAT CGACAAAGCC TTGGCTGAAC AGAGCCCACA GATAGGTGTC 
CTGGAGAAGC TGCATGAAGC TGCTTATAAA AACGCCTTGT CCAACTCGCT CTACTGTCCA 
GACATCATGC TGGGGAAGAT CAGTGTTGAT CATCTTCAGC AGTTCTTTGA CAATAATTAC 
ACCAGTGCAA GAATGGCTCT CGTTGGATTA GGGGTCAGTC ATGCGGCTCT GAAGACGGTC 
GGTGAGCGAT TCTTCGGTTC TCATAAAGGA GCCGGAGCAC CAGGAGCCAA AGCTGTGTAC 
CGCGGCGGTG AGCTGCGGGT TCAGGGCACT GGATCTCTGG TTCACGCTCT GCTGGCTTGT 
GAAGGAGCTG TGACGGGCTC AGCTGAGGCC AACGCCTTCA GTGTGCTGCA GAGGATTCTG 
GGAGCTGGAC CACATGTCAA GAGAGGATCC AACATCAGCA GCAAACTCAG CCAGGGCATC 
GCCAAGGCAA CCGCTCAGCC ATTTGACGCC ACAGCTTTCA GCACTACTTA CTCAGACTCG 
GGGCTCTTCG GGCTCTACAT CATCTCTCAA GCAGACTCGA CCCGCGAGGT CATCAGTTCG 
GCTGTGGCTC AGGTGACTGC TGTGGCGGAG GGAAAGCTGA CCACTGATGA CCTTACCAGA 
GCAAAGAATC AGCTGAAGGC AGATTATCTG ATGTCTCTGG AGAGTTCAGA CGTGCTGCTG 
GAGGAGCTGG GGGTTCAGCT TTTAAACAGC GGCGTCTACA GTTCACCACA GACTGTGACA 
CAAAGCATCG ACTCGGTGAC CTCCAGCGAC GTCCTCAAAG CTGCGAGGAG GTTTGTTGAA 
GGCCAGAAGA GCATGTCGAG TTGTGGATAT CTGGAAAACA CACCGTTTCT GGATGAGCTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

uqcrc2a ( XM_009299823.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009298098.1 Danio rerio ubiquinol-cytochrome c reductase core protein IIa (uqcrc2a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa41097
Clone ID Related Accession (Same CDS sequence)	XM_009299823.1
Accession Version	XM_009299823.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1383bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	ubiquinol-cytochrome c reductase core protein II isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGACGG GCTTCAGAGG TTTCACTCAT CTCTCCAGAC GCTGTTATGC TGCCGCCGCC 
AGGAGGAACA AGGCTCTAAC TGAACCTCTA AGCCATAAGT CTGCAGCTCC ACCAGTGCTC 
CAGCCACAGG ATGTCCAGGT GTCCAAGCTG CCCAGTGGTC TTGTGGTGGC CTCTCTGGAG 
AACTACTCCC CCGTCTCCAA AATCGGTGTG TTTGTGAAAG CCGGCAGCCG CTATGAGACT 
GCAGAAAACC TGGGCGTCAC GCACATGCTC AGATTAGCAG CGAATATGAC CACTAAAGGT 
GCGTCAGCCT TCAAGATCTG TCGCAGTCTG GAGGCTCTGG GTGCTAGTTT GAGTGTGACG 
TCTTCAAGAG AACACATGGT GTATTCTCTG GACTTTCTTA GAGATGATTT TGACGGTGTG 
ATCGAATACC TTGTGGATGT GACCACTGCT CCTGACTTCA GACCCTGGGA GCTGGCAGAT 
CTCACCCCGA GGGTCAAGAT CGACAAGGCC TTGGCGGACC AGAGCCCACA GATAGGTGTC 
CTGGAGAAGC TGCATGAAGC TGCTTATAAA AACGCTTTGT CCAACTCGCT CTACTGTCCA 
GACATCATGC TGGGGAAGAT CAGTGTTGAT CATCTTCAGC AGTTCTTTGA CAATAATTAC 
ACCAGTGCAA GAATGGCTCT CGTTGGATTA GGGGTCAGTC ATGCGGCTCT GAAGACAGTC 
GGTGAGCGAT TCTTCAGTTC TCATAAAGGA GCCGGAGCAC CAGGAGCCAA AGCTGTGTAC 
CGCGGCGGTG AGCTGCGGGT TCAGGGCACT GGATCTCTGG TTCACGCTCT GCTGGCTTGT 
GAAGGAGCTG TGACGGGCTC AGCTGAGGCC AACGCCTTCA GTGTGCTGCA GAGGATTCTG 
GGAGCTGGAC CACATGTCAA GAGAGGATCC AACATCAGCA GCAAACTCAG CCAGGGCATC 
GCCAAGGCAA CCGCTCAGCC ATTTGACGCC ACAGCTTTCA GCACTACTTA CTCAGACTCG 
GGGCTCTTCG GGCTCTACAT CATCTCTCAA GCAGACTCGA CCCGAGAGGT CATCAGTTCA 
GCTGTGGCTC AGGTGACTGC TGTGGCGGAG GGAAAACTGA CCACTGATGA CCTTACCAGA 
GCAAAAAATC AGCTGAAGGC AGATTATCTG ATGTCTCTGG AAAGTTCAGA CGTGCTGCTG 
GAAGAGCTGG GGGTTCAGCT TTTAAACAGC GGCGTCTACA GTTCACCACA GACTGTGACA 
CAAAGCATCG ACTCGGTGAC CTCCAGCGAC GTCCTCAAAG CTGCGAGGAG GTTTGTTGAA 
GGCCAGAAGA GCATGTCGAG TTGTGGATAT CTGGAAAACA CACCGTTTCT GGATGAGCTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009298098.1
CDS	91..1473
Translation	MMTGFRGFTHLSRRCYAAAARRNKALTEPLSHKSAAPPVLQPQDVQVSKLPSGLVVASLENYSPVSKIGVFVKAGSRYETAENLGVTHMLRLAANMTTKGASAFKICRSLEALGASLSVTSSREHMVYSLDFLRDDFDGVIEYLVDVTTAPDFRPWELADLTPRVKIDKALADQSPQIGVLEKLHEAAYKNALSNSLYCPDIMLGKISVDHLQQFFDNNYTSARMALVGLGVSHAALKTVGERFFSSHKGAGAPGAKAVYRGGELRVQGTGSLVHALLACEGAVTGSAEANAFSVLQRILGAGPHVKRGSNISSKLSQGIAKATAQPFDATAFSTTYSDSGLFGLYIISQADSTREVISSAVAQVTAVAEGKLTTDDLTRAKNQLKADYLMSLESSDVLLEELGVQLLNSGVYSSPQTVTQSIDSVTSSDVLKAARRFVEGQKSMSSCGYLENTPFLDEL

Target ORF information:

RefSeq Version	XM_009299823.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio ubiquinol-cytochrome c reductase core protein IIa (uqcrc2a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009299823.1

ORF Insert Sequence:

ATGATGACGG GCTTCAGAGG TTTCACTCAT CTCTCCAGAC GCTGTTATGC TGCCGCCGCC 
AGGAGGAACA AGGCTCTAAC TGAACCTCTA AGCCATAAGT CTGCAGCTCC ACCAGTGCTC 
CAGCCACAGG ATGTCCAGGT GTCCAAGCTG CCCAGTGGTC TTGTGGTGGC CTCTCTGGAG 
AACTACTCCC CCGTCTCCAA AATCGGTGTG TTTGTGAAAG CCGGCAGCCG CTATGAGACT 
GCAGAAAACC TGGGCGTCAC GCACATGCTC AGATTAGCAG CGAATATGAC CACTAAAGGT 
GCGTCAGCCT TCAAGATCTG TCGCAGTCTG GAGGCTCTGG GTGCTAGTTT GAGTGTGACG 
TCTTCAAGAG AACACATGGT GTATTCTCTG GACTTTCTTA GAGATGATTT TGACGGTGTG 
ATCGAATACC TTGTGGATGT GACCACTGCT CCTGACTTCA GACCCTGGGA GCTGGCAGAT 
CTCACCCCGA GGGTCAAGAT CGACAAGGCC TTGGCGGACC AGAGCCCACA GATAGGTGTC 
CTGGAGAAGC TGCATGAAGC TGCTTATAAA AACGCTTTGT CCAACTCGCT CTACTGTCCA 
GACATCATGC TGGGGAAGAT CAGTGTTGAT CATCTTCAGC AGTTCTTTGA CAATAATTAC 
ACCAGTGCAA GAATGGCTCT CGTTGGATTA GGGGTCAGTC ATGCGGCTCT GAAGACAGTC 
GGTGAGCGAT TCTTCAGTTC TCATAAAGGA GCCGGAGCAC CAGGAGCCAA AGCTGTGTAC 
CGCGGCGGTG AGCTGCGGGT TCAGGGCACT GGATCTCTGG TTCACGCTCT GCTGGCTTGT 
GAAGGAGCTG TGACGGGCTC AGCTGAGGCC AACGCCTTCA GTGTGCTGCA GAGGATTCTG 
GGAGCTGGAC CACATGTCAA GAGAGGATCC AACATCAGCA GCAAACTCAG CCAGGGCATC 
GCCAAGGCAA CCGCTCAGCC ATTTGACGCC ACAGCTTTCA GCACTACTTA CTCAGACTCG 
GGGCTCTTCG GGCTCTACAT CATCTCTCAA GCAGACTCGA CCCGAGAGGT CATCAGTTCA 
GCTGTGGCTC AGGTGACTGC TGTGGCGGAG GGAAAACTGA CCACTGATGA CCTTACCAGA 
GCAAAAAATC AGCTGAAGGC AGATTATCTG ATGTCTCTGG AAAGTTCAGA CGTGCTGCTG 
GAAGAGCTGG GGGTTCAGCT TTTAAACAGC GGCGTCTACA GTTCACCACA GACTGTGACA 
CAAAGCATCG ACTCGGTGAC CTCCAGCGAC GTCCTCAAAG CTGCGAGGAG GTTTGTTGAA 
GGCCAGAAGA GCATGTCGAG TTGTGGATAT CTGGAAAACA CACCGTTTCT GGATGAGCTG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Convergent extension movements and ciliary function are mediated by ofd1, a zebrafish orthologue of the human oral-facial-digital type 1 syndrome gene.
Human molecular genetics18(2)289-303(2009 Jan)
Ferrante MI,Romio L,Castro S,Collins JE,Goulding DA,Stemple DL,Woolf AS,Wilson SW