Gene Symbol | pcdh1g22 |
Entrez Gene ID | 108191476 |
Full Name | protocadherin gamma-C5-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » pcdh1g22 cDNA ORF clone
Gene Symbol | pcdh1g22 |
Entrez Gene ID | 108191476 |
Full Name | protocadherin gamma-C5-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017358029.2 | XP_017213518.1 | protocadherin gamma-C5-like |
XM_017358029.1 | XP_017213518.1 | protocadherin gamma-C5-like |
NM_212658.2 | NP_997823.2 | protocadherin 1 gamma 22 precursor |
Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts.
Sullivan C, Lage CR, Yoder JA, Postlethwait JH, Kim CH
PloS one12(6)e0179517(2017)
Regulation of protocadherin gene expression by multiple neuron-restrictive silencer elements scattered in the gene cluster.
Tan YP, Li S, Jiang XJ, Loh W, Foo YK, Loh CB, Xu Q, Yuen WH, Jones M, Fu J, Venkatesh B, Yu WP
Nucleic acids research38(15)4985-97(2010 Aug)
Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes.
Wu Q
Genetics169(4)2179-88(2005 Apr)
Genomic organization and transcripts of the zebrafish Protocadherin genes.
Tada MN, Senzaki K, Tai Y, Morishita H, Tanaka YZ, Murata Y, Ishii Y, Asakawa S, Shimizu N, Sugino H, Yagi T
Gene340(2)197-211(2004 Oct)
Gene conversion and the evolution of protocadherin gene cluster diversity.
Noonan JP, Grimwood J, Schmutz J, Dickson M, Myers RM
Genome research14(3)354-66(2004 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pcdh1g22 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pcdh1g22 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa159681 | |
Clone ID Related Accession (Same CDS sequence) | NM_212658.2 | |
Accession Version | NM_212658.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2835bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-21 | |
Organism | Danio rerio(zebrafish) | |
Product | protocadherin 1 gamma 22 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR774179.7. On Mar 28, 2018 this sequence version replaced NM_212658.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC066125.1, AY576949.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_997823.2 |
CDS | 112..2946 |
Translation |
Target ORF information:
Target ORF information:
|
NM_212658.2 |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54085 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358029.2 , XM_017358029.1 | |
Accession Version | XM_017358029.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2571bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | protocadherin gamma-C5-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358029.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213518.1 |
CDS | 263..2833 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358029.2 |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54085 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358029.2 , XM_017358029.1 | |
Accession Version | XM_017358029.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2571bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | protocadherin gamma-C5-like | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213518.1 |
CDS | 196..2766 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358029.1 |
1 | ATGGAATCTC TGATCTTTTT GAGGAGGATT TGGTGGTGCT GTTTCTTTAT TATTTCTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts. |
Regulation of protocadherin gene expression by multiple neuron-restrictive silencer elements scattered in the gene cluster. |
Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes. |
Genomic organization and transcripts of the zebrafish Protocadherin genes. |
Gene conversion and the evolution of protocadherin gene cluster diversity. |