Gene Symbol | uaf-1 |
Entrez Gene ID | 175270 |
Full Name | Splicing factor U2AF 65 kDa subunit |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » uaf-1 cDNA ORF clone
Gene Symbol | uaf-1 |
Entrez Gene ID | 175270 |
Full Name | Splicing factor U2AF 65 kDa subunit |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_064925.6 | NP_497326.2 | Splicing factor U2AF 65 kDa subunit |
NM_001027799.1 | NP_001022970.1 | U2 snRNP auxiliary factor large subunit |
NM_001027796.4 | NP_001022967.1 | Splicing factor U2AF 65 kDa subunit |
NM_001373843.1 | NP_001359811.1 | Splicing factor U2AF 65 kDa subunit |
NM_001027798.1 | NP_001022969.1 | Splicing factor U2AF 65 kDa subunit |
NM_001027796.3 | NP_001022967.1 | Splicing factor U2AF 65 kDa subunit |
Homo sapiens (human) | U2AF2 | NP_009210.1 |
Mus musculus (house mouse) | U2af2 | NP_598432.2 |
Danio rerio (zebrafish) | u2af2b | NP_991252.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002908 | XP_311994.4 |
Bos taurus (cattle) | U2AF2 | NP_001068804.1 |
Neurospora crassa | NCU03039 | XP_964044.1 |
Arabidopsis thaliana (thale cress) | ATU2AF65A | NP_001190937.1 |
Oryza sativa (rice) | Os11g0682300 | NP_001068459.1 |
Canis lupus familiaris (dog) | U2AF2 | XP_005616162.1 |
Arabidopsis thaliana (thale cress) | AT1G60900 | NP_176287.3 |
Oryza sativa (rice) | Os11g0636900 | NP_001068330.1 |
Xenopus tropicalis (tropical clawed frog) | u2af2 | NP_001016998.1 |
Rattus norvegicus (Norway rat) | U2af2 | XP_006228382.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_00348 | XP_003718735.1 |
Danio rerio (zebrafish) | u2af2a | NP_001025127.1 |
Drosophila melanogaster (fruit fly) | U2af50 | NP_476891.1 |
Caenorhabditis elegans (roundworm) | uaf-1 | NP_001022967.1 |
Schizosaccharomyces pombe (fission yeast) | prp2 | NP_595396.1 |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
WDR-20 and WDR-48 form a complex with USP-46 and stimulate the DUB to deubiquitinate and stabilize GLR-1 in vivo.
Title: The WD40-repeat proteins WDR-20 and WDR-48 bind and activate the deubiquitinating enzyme USP-46 to promote the abundance of the glutamate receptor GLR-1 in the ventral nerve cord of Caenorhabditis elegans.
The interaction of TEG-1 CD2BP2 with UAF-1 U2AF65, combined with its previously described function in U4/U6.U5 tri-snRNP, suggests that TEG-1 CD2BP2 functions in two distinct locations in the splicing cascade.
Title: TEG-1 CD2BP2 regulates stem cell proliferation and sex determination in the C. elegans germ line and physically interacts with the UAF-1 U2AF65 splicing factor.
Mutations in the splicing factors U2AF large subunit altered the splicing of tos-1. 3' splice sites.
Title: In vivo effects on intron retention and exon skipping by the U2AF large subunit and SF1/BBP in the nematode Caenorhabditis elegans.
observations provide in vivo evidence that UAF-1 can act in regulating 3' splice-site choice and establish a system that can be used to investigate the in vivo regulation of RNA splicing in C. elegans.
Title: Mutations in the Caenorhabditis elegans U2AF large subunit UAF-1 alter the choice of a 3' splice site in vivo.
The following uaf-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the uaf-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa340822 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027796.4 , NM_001027796.3 | |
Accession Version | NM_001027796.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1491bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Splicing factor U2AF 65 kDa subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_001027796.3. COMPLETENESS: incomplete on the 5' end. |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022967.1 |
CDS | 1..1491 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027796.4 |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340822 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027796.4 , NM_001027796.3 | |
Accession Version | NM_001027796.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1491bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Splicing factor U2AF 65 kDa subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_001027796.2. COMPLETENESS: incomplete on both ends. |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022967.1 |
CDS | 1..1491 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027796.3 |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340823 | |
Clone ID Related Accession (Same CDS sequence) | NM_064925.6 , NM_001373843.1 | |
Accession Version | NM_064925.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 432bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Splicing factor U2AF 65 kDa subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_064925.5. COMPLETENESS: incomplete on both ends. |
1 | ATGCAACTCG GCGACAAGCA GCTCGTCGTT CAACTTGCCT GTGCTAATCA ACAACGTCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_497326.2 |
CDS | 1..432 |
Translation |
Target ORF information:
Target ORF information:
|
NM_064925.6 |
1 | ATGCAACTCG GCGACAAGCA GCTCGTCGTT CAACTTGCCT GTGCTAATCA ACAACGTCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340823 | |
Clone ID Related Accession (Same CDS sequence) | NM_064925.6 , NM_001373843.1 | |
Accession Version | NM_001373843.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 432bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Splicing factor U2AF 65 kDa subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). |
1 | ATGCAACTCG GCGACAAGCA GCTCGTCGTT CAACTTGCCT GTGCTAATCA ACAACGTCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001359811.1 |
CDS | 1276..1707 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001373843.1 |
1 | ATGCAACTCG GCGACAAGCA GCTCGTCGTT CAACTTGCCT GTGCTAATCA ACAACGTCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340824 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027798.1 | |
Accession Version | NM_001027798.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1425bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Splicing factor U2AF 65 kDa subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). COMPLETENESS: incomplete on both ends. |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022969.1 |
CDS | 1..1425 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027798.1 |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340825 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027799.1 | |
Accession Version | NM_001027799.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1416bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | U2 snRNP auxiliary factor large subunit | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). COMPLETENESS: incomplete on both ends. |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022970.1 |
CDS | 1..1416 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027799.1 |
1 | ATGAGTGATC ACCAGGATGG CATGAAACTT GAAGATATTG AACGCCAATT TTTGGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |