Gene Symbol | VDD |
Entrez Gene ID | 831667 |
Full Name | VERDANDI |
Synonyms | MCM23.7,MCM23_7,VERDANDI |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » VDD cDNA ORF clone
Gene Symbol | VDD |
Entrez Gene ID | 831667 |
Full Name | VERDANDI |
Synonyms | MCM23.7,MCM23_7,VERDANDI |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_121805.3 | NP_197301.1 | VERDANDI |
NM_001343531.1 | NP_001330241.1 | VERDANDI |
Arabidopsis thaliana (thale cress) | AT5G18090 | NP_197310.1 |
Arabidopsis thaliana (thale cress) | AT2G16210 | NP_179217.2 |
Arabidopsis thaliana (thale cress) | AT2G35310 | NP_181074.2 |
Arabidopsis thaliana (thale cress) | AT3G17010 | NP_188326.1 |
Arabidopsis thaliana (thale cress) | AT5G09780 | NP_196540.1 |
Arabidopsis thaliana (thale cress) | VDD | NP_197301.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data indicate that SEEDSTICK (STK) and SEPALLATA3 (SEP3) dimers can induce loop formation in the VERDANDI (VDD) promoter by binding to two nearby CC(A/T)6GG (CArG) boxes essential for promoter activity.
Title: MADS domain transcription factors mediate short-range DNA looping that is essential for target gene expression in Arabidopsis.
STK, SHP1, and SHP2 redundantly regulate VERDANDI. The vdd mutant shows defects during the fertilization process resulting in semisterility.
Title: VERDANDI is a direct target of the MADS domain ovule identity complex and affects embryo sac differentiation in Arabidopsis.
The following VDD gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VDD cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb18740 | |
Clone ID Related Accession (Same CDS sequence) | NM_121805.3 | |
Accession Version | NM_121805.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 924bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | VERDANDI | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Apr 18, 2007 this sequence version replaced NM_121805.2. |
1 | ATGGTGAAAA ACAAAGCTTT TTTTGGTCAG ATTATGGAAG AAAGAGATAA TCCAGCATTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_197301.1 |
CDS | 170..1093 |
Translation |
Target ORF information:
Target ORF information:
|
NM_121805.3 |
1 | ATGGTGAAAA ACAAAGCTTT TTTTGGTCAG ATTATGGAAG AAAGAGATAA TCCAGCATTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb40990 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343531.1 | |
Accession Version | NM_001343531.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 819bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | VERDANDI | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGATTCCTC ATCACTTGAT AAGAAGCATC TCCGACAAGT CTTCATCGTT TAAGATGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001330241.1 |
CDS | 32..850 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343531.1 |
1 | ATGATTCCTC ATCACTTGAT AAGAAGCATC TCCGACAAGT CTTCATCGTT TAAGATGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |