ORF » Species Summary » Populus trichocarpa » POPTR_0002s15030g cDNA ORF clone

POPTR_0002s15030g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s15030g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s15030g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06522 XM_002301264.2
Latest version!		 Populus trichocarpa DNA-binding family protein (POPTR_0002s15030g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa424354 XM_002301264.3
Latest version!		 Populus trichocarpa AT-hook motif nuclear-localized protein 22 (LOC7494011), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s15030g ( XM_002301264.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301300.1 Populus trichocarpa DNA-binding family protein (POPTR_0002s15030g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06522
    Clone ID Related Accession (Same CDS sequence) XM_002301264.2
    Accession Version XM_002301264.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 897bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product DNA-binding family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301264.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATCCAG TTGCGGCTCA TGGGCGTCCT CTTCCTCCAC CTTTCCACAC AAGAGATTTT 
    CATCTACATC AATTTCAACA CCAGCAACAA CAGAATTCTG AAGATGAACA AAGCGGTAAC 
    GGTAACTTAA ACCGTGGTCA AAAGCGAGAG CACGCTGAAA TCGCCACTAA TAACAACAAC 
    ACAGCAGAAG GCAAAGAATT AGTTCCTTCA AGTGCTGGTG GAGAAGGAGA AATTACAAGA 
    AGACCAAGAG GTAGGCCTGC TGGGTCTAAA AACAAGCCTA AACCACCAAT CATAATCACA 
    AGAGATAGCC CAAATGCCCT TCGATCCCAT GTCATGGAAA TCGCTACCGG ATGCGATATC 
    ATGGAGAGTG TATCAACTTT TGCAAGGAGG AGGCAAAGAG GAGTTTGCAT TTTGAGTGCA 
    ACCGGAACAG TAACAAATGT AACTCTTAAG CAACCAGCTT CGCCCGGTGC GGTGGTTACT 
    TTACATGGAA GATTCGAGAT TTTATCGCTT TCAGGTTCGT TCTTGCCACC TCCAGCTCCA 
    CCAGCTGCTT CAGGATTGAC GATTTATTTA GCTGGTGGCC AAGGCCAAGT TGTTGGGGGG 
    AGTGTGGTTG GCCCACTTCT AGCATCTGGA CCGGTGGTGA TCATGGCTGC TTCTTTTGGT 
    AATGCAGCTT ATGAGAGGCT GCCTTTGGAA GAGGATGAGT CGCAAACACC GGTGCCTGGA 
    ACTGGACCTT TAGGGTCACC AGGAGTTAGT AGCATTGGGC AACAGAATCA GCAACAACAC 
    CAACTAATGC AAGATCCAAA CACATCTCTC TTTCAAGGGT TGCCTCAGAA TCTACTAAAT 
    TCAGTGCAAC TCCCATCTGA GGCCTACTGG GGCACAGGCG GCCGCCCTCC TTATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301300.1
    CDS169..1065
    Translation

    Target ORF information:

    RefSeq Version XM_002301264.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa DNA-binding family protein (POPTR_0002s15030g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301264.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATCCAG TTGCGGCTCA TGGGCGTCCT CTTCCTCCAC CTTTCCACAC AAGAGATTTT 
    CATCTACATC AATTTCAACA CCAGCAACAA CAGAATTCTG AAGATGAACA AAGCGGTAAC 
    GGTAACTTAA ACCGTGGTCA AAAGCGAGAG CACGCTGAAA TCGCCACTAA TAACAACAAC 
    ACAGCAGAAG GCAAAGAATT AGTTCCTTCA AGTGCTGGTG GAGAAGGAGA AATTACAAGA 
    AGACCAAGAG GTAGGCCTGC TGGGTCTAAA AACAAGCCTA AACCACCAAT CATAATCACA 
    AGAGATAGCC CAAATGCCCT TCGATCCCAT GTCATGGAAA TCGCTACCGG ATGCGATATC 
    ATGGAGAGTG TATCAACTTT TGCAAGGAGG AGGCAAAGAG GAGTTTGCAT TTTGAGTGCA 
    ACCGGAACAG TAACAAATGT AACTCTTAAG CAACCAGCTT CGCCCGGTGC GGTGGTTACT 
    TTACATGGAA GATTCGAGAT TTTATCGCTT TCAGGTTCGT TCTTGCCACC TCCAGCTCCA 
    CCAGCTGCTT CAGGATTGAC GATTTATTTA GCTGGTGGCC AAGGCCAAGT TGTTGGGGGG 
    AGTGTGGTTG GCCCACTTCT AGCATCTGGA CCGGTGGTGA TCATGGCTGC TTCTTTTGGT 
    AATGCAGCTT ATGAGAGGCT GCCTTTGGAA GAGGATGAGT CGCAAACACC GGTGCCTGGA 
    ACTGGACCTT TAGGGTCACC AGGAGTTAGT AGCATTGGGC AACAGAATCA GCAACAACAC 
    CAACTAATGC AAGATCCAAA CACATCTCTC TTTCAAGGGT TGCCTCAGAA TCTACTAAAT 
    TCAGTGCAAC TCCCATCTGA GGCCTACTGG GGCACAGGCG GCCGCCCTCC TTATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s15030g ( XM_002301264.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301300.1 Populus trichocarpa AT-hook motif nuclear-localized protein 22 (LOC7494011), mRNA.
    Price & Availability↑
    CloneID OPa424354
    Clone ID Related Accession (Same CDS sequence) XM_002301264.3
    Accession Version XM_002301264.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 897bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product AT-hook motif nuclear-localized protein 22
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301264.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATCCAG TTGCGGCTCA TGGGCGTCCT CTTCCTCCAC CTTTCCACAC AAGAGATTTT 
    CATCTACATC AATTTCAACA CCAGCAACAA CAGAATTCTG AAGATGAACA AAGCGGTAAC 
    GGTAACTTAA ACCGTGGTCA AAAGCGAGAG CACGCTGAAA TCGCCACTAA TAACAACAAC 
    ACAGCAGAAG GCAAAGAATT AGTTCCTTCA AGTGCTGGTG GAGAAGGAGA AATTACAAGA 
    AGACCAAGAG GTAGGCCTGC TGGGTCTAAA AACAAGCCTA AACCACCAAT CATAATCACA 
    AGAGATAGCC CAAATGCCCT TCGATCCCAT GTCATGGAAA TCGCTACCGG ATGCGATATC 
    ATGGAGAGTG TATCAACTTT TGCAAGGAGG AGGCAAAGAG GAGTTTGCAT TTTGAGTGCA 
    ACCGGAACAG TAACAAATGT AACTCTTAAG CAACCAGCTT CGCCCGGTGC GGTGGTTACT 
    TTACATGGAA GATTCGAGAT TTTATCGCTT TCAGGTTCGT TCTTGCCACC TCCAGCTCCA 
    CCAGCTGCTT CAGGATTGAC GATTTATTTA GCTGGTGGCC AAGGCCAAGT TGTTGGGGGG 
    AGTGTGGTTG GCCCACTTCT AGCATCTGGA CCGGTGGTGA TCATGGCTGC TTCTTTTGGT 
    AATGCAGCTT ATGAGAGGCT GCCTTTGGAA GAGGATGAGT CGCAAACACC GGTGCCTGGA 
    ACTGGACCTT TAGGGTCACC AGGAGTTAGT AGCATTGGGC AACAGAATCA GCAACAACAC 
    CAATTAATGC AAGATCCAAA CACATCTCTC TTTCAAGGGT TGCCTCAGAA TCTACTAAAT 
    TCAGTGCAAC TCCCATCTGA GGCCTACTGG GGCACAGGCG GCCGCCCTCC TTATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301300.1
    CDS534..1430
    Translation

    Target ORF information:

    RefSeq Version XM_002301264.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa AT-hook motif nuclear-localized protein 22 (LOC7494011), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301264.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATCCAG TTGCGGCTCA TGGGCGTCCT CTTCCTCCAC CTTTCCACAC AAGAGATTTT 
    CATCTACATC AATTTCAACA CCAGCAACAA CAGAATTCTG AAGATGAACA AAGCGGTAAC 
    GGTAACTTAA ACCGTGGTCA AAAGCGAGAG CACGCTGAAA TCGCCACTAA TAACAACAAC 
    ACAGCAGAAG GCAAAGAATT AGTTCCTTCA AGTGCTGGTG GAGAAGGAGA AATTACAAGA 
    AGACCAAGAG GTAGGCCTGC TGGGTCTAAA AACAAGCCTA AACCACCAAT CATAATCACA 
    AGAGATAGCC CAAATGCCCT TCGATCCCAT GTCATGGAAA TCGCTACCGG ATGCGATATC 
    ATGGAGAGTG TATCAACTTT TGCAAGGAGG AGGCAAAGAG GAGTTTGCAT TTTGAGTGCA 
    ACCGGAACAG TAACAAATGT AACTCTTAAG CAACCAGCTT CGCCCGGTGC GGTGGTTACT 
    TTACATGGAA GATTCGAGAT TTTATCGCTT TCAGGTTCGT TCTTGCCACC TCCAGCTCCA 
    CCAGCTGCTT CAGGATTGAC GATTTATTTA GCTGGTGGCC AAGGCCAAGT TGTTGGGGGG 
    AGTGTGGTTG GCCCACTTCT AGCATCTGGA CCGGTGGTGA TCATGGCTGC TTCTTTTGGT 
    AATGCAGCTT ATGAGAGGCT GCCTTTGGAA GAGGATGAGT CGCAAACACC GGTGCCTGGA 
    ACTGGACCTT TAGGGTCACC AGGAGTTAGT AGCATTGGGC AACAGAATCA GCAACAACAC 
    CAATTAATGC AAGATCCAAA CACATCTCTC TTTCAAGGGT TGCCTCAGAA TCTACTAAAT 
    TCAGTGCAAC TCCCATCTGA GGCCTACTGG GGCACAGGCG GCCGCCCTCC TTATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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