ORF » Species Summary » Populus trichocarpa » LOC7459554 cDNA ORF clone

LOC7459554 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7459554 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7459554 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa04855 XM_002301824.2
Latest version!		 Populus trichocarpa pentatricopeptide repeat-containing family protein (POPTR_0002s26050g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $510.30
$729.00
OPa424427 XM_024595051.1
Latest version!		 Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa424427 XM_024595052.1
Latest version!		 Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7459554 ( XM_002301824.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301860.2 Populus trichocarpa pentatricopeptide repeat-containing family protein (POPTR_0002s26050g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa04855
    Clone ID Related Accession (Same CDS sequence) XM_002301824.2
    Accession Version XM_002301824.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2802bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product pentatricopeptide repeat-containing family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301824.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGTATGCTG TCATGGTCAA AACCAATACA AACCAAGATT GTTACTTAAT GAATCAATTT 
    ATATCAGCTC TTTCTACTTT TAACCGTATG GATTATGCAG TTTTAGCCTA TACCCAGATG 
    GAAATTCCTA ATGTTTTTGT GTATAATGCA ATGATTAAAG GGTTTGTTCA AAGCTATCAA 
    CCAGTTCAGG CTCTTGAATT GTACGTTCAA ATGCTAAGAG CTAATGTTTC TCCTACAAGT 
    TATACATTTC CTTCGTTGAT AAAAGCTTGT GGCTTGGTAT CACAGTTGAG GTTTGCAGAA 
    GCTGTTCATG GTCATGTTTG GAGAAATGGG TTTGATTCAC ACGTGTTTGT TCAAACTTCT 
    TTGGTTGATT TTTACTCAAG TATGGGTAGA ATTGAAGAAT CTGTAAGGGT GTTTGATGAA 
    ATGCCTGAAA GAGATGTCTT TGCTTGGACT ACAATGGTTT CTGGTCTTGT GCGGGTCGGT 
    GATATGAGTT CTGCTGGGAG ATTGTTTGAT ATGATGCCTG ATAGGAATTT AGCTACTTGG 
    AATACTTTGA TTGATGGGTA TGCAAGATTG AGAGAAGTTG ATGTGGCGGA GTTGTTGTTT 
    AATCAAATGC CAGCAAGAGA TATTATTTCA TGGACTACAA TGATCAATTG TTATTCTCAG 
    AATAAGAGAT TTAGAGAAGC ATTGGGGGTT TTTAATGAGA TGGCAAAACA TGGGATCAGC 
    CCAGATGAAG TGACCATGGC AACTGTGATT TCAGCTTGTG CTCATCTTGG AGCCCTTGAC 
    TTAGGGAAGG AAATACATTA CTACATTATG CAGCATGGAT TTAACCTTGA TGTCTACATA 
    GGTTCGGCAT TGATTGATAT GTATGCTAAG TGTGGGAGTC TAGATAGGTC CCTTTTGATG 
    TTCTTCAAGT TGCGAGAGAA GAACTTGTTC TGTTGGAATT CAGTGATTGA AGGGCTTGCT 
    GTTCATGGAT ATGCAGAAGA AGCACTGGCA ATGTTTGACA AGATGGAGAG GGAGAAAATT 
    AAGCCAAATG GGGTTACATT TGTAAGTGTT TTAAGTGCCT GCAATCATGC AGGACTTATT 
    GAAGAAGGTC GTAAGAGGTT TGCGAGTATG ACACGAGATC ATTCCATCCC TCCTGGAGTT 
    GAACATTATG GATGCATGGT TGATCTCTTG AGCAAAGCTG GCTTGCTTGA AGAAGCACTG 
    CAATTGATAA GAACAATGAA GTTGGAACCT AATGCTGTTA TTTGGGGTGC GTTGCTAAGT 
    GGATGTAAGC TTCACAGGAA CTTGGAGATT GCTCAGGTTG CTGCTAATAA ATTGATGGTT 
    TTGGAGCCTG GCAACAGTGG ATATTACACT CTTTTGGTTA ACATGAATGC TGAAGTTAAC 
    AGATGGGGCG AGGCTGCAAA GATCAGGTTA ACCATGAAGG AGCAGGGGGT AGAAAAAAGA 
    TGCCCTGGGT CCAGTTGGAT CGAGATGGAA AGTCAAGTTC ATCAATTTGC GGCATCTGAT 
    AAATCTCATG CAGCTTCTGA TGAGATTTAC TCGTTGCTGG CTGAATTAGA TGGGCAGATG 
    AAGCTAGCGG GCTACGTACC TGAACTATGT GAAGCAGAGA CAGTGGAGCA GAGGCGTAGT 
    TCGATCTCAC ATGAAAAAGG AAATGTCCCT GTTAACCCTG GCTGTTTCGG TGCCAACACT 
    GAGGCCTCCA TCTTGTGGAC ATGGTATCAA AGAAGCGGAT GTGACAGAAG GCATCTGCTT 
    TACAGAAGGA CATTCTATGG TGCGTTGTAC ATGATAGCAT TAGCAGCTGG TTCTGGTGGA 
    ACCAAGCCTA ATGCATCCAC CATGGGACTG ATAAATTTGA TGATTTTTAA CCTAAAGAAG 
    ACCAAAAGCT ATCATTCTTT AATTGCCCTT GGCTATGCCC TTCCAACAAT GGGTGTGGCA 
    GTTTCCATTA TTGTGTTCTT GGTAAGCACT CCATTCTACA GAAACAAATT GCCCCCAGTG 
    AGCCTATTCA CCAGGATGGA TCAAGTAATT GTAGCTTCTG TGAGGAAGTG GAAGGTACCC 
    GTCCCAGGTG ACCCAAAACA GCTGCATGAG CTTAGCCTGG ATGAGTACAC AGGATCAGGG 
    AAATTCGGAA TTGCCTATAC CTCTTCACTT GGATTCCTTG ACAAAGCAGC TGTGGAGAGC 
    GGTTCAAGGT CACCGTGGAT GCTATTCCCT GTGACCCAAG TTGAAGAAAC CAAGCAAATG 
    ATTAAAGTGC TTCCAGTATG GGCTGCTACT TTCATACCTA GCACCATTTT AGCTCAAGTG 
    CACACCCTGT TCATCAAACA GGGAACTGTC TTGGACAGGA GCATGGGACC CCATTTTGAA 
    ATCCCTCCAG CGTGCCTCGC AGCTTTTGTA ACCATCTCCA TGTTGATAAG CCTAGCCATT 
    TATGACCGTT ACTTTGTGCT GATGGCTAGG CATTACATGA AAAGACCGAG AGGAACTACA 
    TTGCTGCAGA GAATGGGAAT TGGGTTTATG TTGCATGTTA TTGTAATGAT CACAGCCTGC 
    TTAGCAGAAA GGAAGAGGCT TAGTGTGGCA AGAGAACACA ACATAATTAG TAAAAATGAG 
    GTAGTTCCTC TCAGTATATT TATTCTACTC CCTCAGTTTG TTTTGATGGG AGTTGCTGAT 
    AACTTTGTGG AAGCAGCGAA GATAGAGTTT TTCTATGACC AAGCACGAGA AGGAATGAAG 
    AGCCTAGGGA ATTCATACAT CGCCACCTTC TTGGGAATCG GGAGTTTCCT TAGTAGTTTT 
    CTCCTATCAA CAGTTTCTAA AATCACCAAG AAGCATGCAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301860.2
    CDS1..2802
    Translation

    Target ORF information:

    RefSeq Version XM_002301824.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa pentatricopeptide repeat-containing family protein (POPTR_0002s26050g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301824.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGTATGCTG TCATGGTCAA AACCAATACA AACCAAGATT GTTACTTAAT GAATCAATTT 
    ATATCAGCTC TTTCTACTTT TAACCGTATG GATTATGCAG TTTTAGCCTA TACCCAGATG 
    GAAATTCCTA ATGTTTTTGT GTATAATGCA ATGATTAAAG GGTTTGTTCA AAGCTATCAA 
    CCAGTTCAGG CTCTTGAATT GTACGTTCAA ATGCTAAGAG CTAATGTTTC TCCTACAAGT 
    TATACATTTC CTTCGTTGAT AAAAGCTTGT GGCTTGGTAT CACAGTTGAG GTTTGCAGAA 
    GCTGTTCATG GTCATGTTTG GAGAAATGGG TTTGATTCAC ACGTGTTTGT TCAAACTTCT 
    TTGGTTGATT TTTACTCAAG TATGGGTAGA ATTGAAGAAT CTGTAAGGGT GTTTGATGAA 
    ATGCCTGAAA GAGATGTCTT TGCTTGGACT ACAATGGTTT CTGGTCTTGT GCGGGTCGGT 
    GATATGAGTT CTGCTGGGAG ATTGTTTGAT ATGATGCCTG ATAGGAATTT AGCTACTTGG 
    AATACTTTGA TTGATGGGTA TGCAAGATTG AGAGAAGTTG ATGTGGCGGA GTTGTTGTTT 
    AATCAAATGC CAGCAAGAGA TATTATTTCA TGGACTACAA TGATCAATTG TTATTCTCAG 
    AATAAGAGAT TTAGAGAAGC ATTGGGGGTT TTTAATGAGA TGGCAAAACA TGGGATCAGC 
    CCAGATGAAG TGACCATGGC AACTGTGATT TCAGCTTGTG CTCATCTTGG AGCCCTTGAC 
    TTAGGGAAGG AAATACATTA CTACATTATG CAGCATGGAT TTAACCTTGA TGTCTACATA 
    GGTTCGGCAT TGATTGATAT GTATGCTAAG TGTGGGAGTC TAGATAGGTC CCTTTTGATG 
    TTCTTCAAGT TGCGAGAGAA GAACTTGTTC TGTTGGAATT CAGTGATTGA AGGGCTTGCT 
    GTTCATGGAT ATGCAGAAGA AGCACTGGCA ATGTTTGACA AGATGGAGAG GGAGAAAATT 
    AAGCCAAATG GGGTTACATT TGTAAGTGTT TTAAGTGCCT GCAATCATGC AGGACTTATT 
    GAAGAAGGTC GTAAGAGGTT TGCGAGTATG ACACGAGATC ATTCCATCCC TCCTGGAGTT 
    GAACATTATG GATGCATGGT TGATCTCTTG AGCAAAGCTG GCTTGCTTGA AGAAGCACTG 
    CAATTGATAA GAACAATGAA GTTGGAACCT AATGCTGTTA TTTGGGGTGC GTTGCTAAGT 
    GGATGTAAGC TTCACAGGAA CTTGGAGATT GCTCAGGTTG CTGCTAATAA ATTGATGGTT 
    TTGGAGCCTG GCAACAGTGG ATATTACACT CTTTTGGTTA ACATGAATGC TGAAGTTAAC 
    AGATGGGGCG AGGCTGCAAA GATCAGGTTA ACCATGAAGG AGCAGGGGGT AGAAAAAAGA 
    TGCCCTGGGT CCAGTTGGAT CGAGATGGAA AGTCAAGTTC ATCAATTTGC GGCATCTGAT 
    AAATCTCATG CAGCTTCTGA TGAGATTTAC TCGTTGCTGG CTGAATTAGA TGGGCAGATG 
    AAGCTAGCGG GCTACGTACC TGAACTATGT GAAGCAGAGA CAGTGGAGCA GAGGCGTAGT 
    TCGATCTCAC ATGAAAAAGG AAATGTCCCT GTTAACCCTG GCTGTTTCGG TGCCAACACT 
    GAGGCCTCCA TCTTGTGGAC ATGGTATCAA AGAAGCGGAT GTGACAGAAG GCATCTGCTT 
    TACAGAAGGA CATTCTATGG TGCGTTGTAC ATGATAGCAT TAGCAGCTGG TTCTGGTGGA 
    ACCAAGCCTA ATGCATCCAC CATGGGACTG ATAAATTTGA TGATTTTTAA CCTAAAGAAG 
    ACCAAAAGCT ATCATTCTTT AATTGCCCTT GGCTATGCCC TTCCAACAAT GGGTGTGGCA 
    GTTTCCATTA TTGTGTTCTT GGTAAGCACT CCATTCTACA GAAACAAATT GCCCCCAGTG 
    AGCCTATTCA CCAGGATGGA TCAAGTAATT GTAGCTTCTG TGAGGAAGTG GAAGGTACCC 
    GTCCCAGGTG ACCCAAAACA GCTGCATGAG CTTAGCCTGG ATGAGTACAC AGGATCAGGG 
    AAATTCGGAA TTGCCTATAC CTCTTCACTT GGATTCCTTG ACAAAGCAGC TGTGGAGAGC 
    GGTTCAAGGT CACCGTGGAT GCTATTCCCT GTGACCCAAG TTGAAGAAAC CAAGCAAATG 
    ATTAAAGTGC TTCCAGTATG GGCTGCTACT TTCATACCTA GCACCATTTT AGCTCAAGTG 
    CACACCCTGT TCATCAAACA GGGAACTGTC TTGGACAGGA GCATGGGACC CCATTTTGAA 
    ATCCCTCCAG CGTGCCTCGC AGCTTTTGTA ACCATCTCCA TGTTGATAAG CCTAGCCATT 
    TATGACCGTT ACTTTGTGCT GATGGCTAGG CATTACATGA AAAGACCGAG AGGAACTACA 
    TTGCTGCAGA GAATGGGAAT TGGGTTTATG TTGCATGTTA TTGTAATGAT CACAGCCTGC 
    TTAGCAGAAA GGAAGAGGCT TAGTGTGGCA AGAGAACACA ACATAATTAG TAAAAATGAG 
    GTAGTTCCTC TCAGTATATT TATTCTACTC CCTCAGTTTG TTTTGATGGG AGTTGCTGAT 
    AACTTTGTGG AAGCAGCGAA GATAGAGTTT TTCTATGACC AAGCACGAGA AGGAATGAAG 
    AGCCTAGGGA ATTCATACAT CGCCACCTTC TTGGGAATCG GGAGTTTCCT TAGTAGTTTT 
    CTCCTATCAA CAGTTTCTAA AATCACCAAG AAGCATGCAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7459554 ( XM_024595052.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450820.1 Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa424427
    Clone ID Related Accession (Same CDS sequence) XM_024595052.1 , XM_024595051.1
    Accession Version XM_024595052.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1680bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product pentatricopeptide repeat-containing protein At1g06143
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCTTCTA ACTGTTATTC AATTCAAACC ATAGTTAACC ACTTAAAGCA CTGCAGCAAG 
    CTGAAACAGC TACAATCCAT GTATGCTGTC ATGGTCAAAA CCAATACAAA CCAAGATTGT 
    TACTTAATGA ATCAATTTAT ATCAGCTCTT TCTACTTTTA ACCGTATGGA TTATGCAGTT 
    TTAGCCTATA CCCAGATGGA AATTCCTAAT GTTTTTGTGT ATAATGCAAT GATTAAAGGG 
    TTTGTTCAAA GCTATCAACC AGTTCAGGCT CTTGAATTGT ACGTTCAAAT GCTAAGAGCT 
    AATGTTTCTC CTACAAGTTA TACATTTCCT TCGTTGATAA AAGCTTGTGG CTTGGTATCA 
    CAGTTGAGGT TTGCAGAAGC TGTTCATGGT CATGTTTGGA GAAATGGGTT TGATTCACAC 
    GTGTTTGTTC AAACTTCTTT GGTTGATTTT TACTCAAGTA TGGGTAGAAT TGAAGAATCT 
    GTAAGGGTGT TTGATGAAAT GCCTGAAAGA GATGTCTTTG CTTGGACTAC AATGGTTTCT 
    GGTCTTGTGC GGGTCGGTGA TATGAGTTCT GCTGGGAGAT TGTTTGATAT GATGCCTGAT 
    AGGAATTTAG CTACTTGGAA TACTTTGATT GATGGGTATG CAAGATTGAG AGAAGTTGAT 
    GTGGCGGAGT TGTTGTTTAA TCAAATGCCA GCAAGAGATA TTATTTCATG GACTACAATG 
    ATCAATTGTT ATTCTCAGAA TAAGAGATTT AGAGAAGCAT TGGGGGTTTT TAATGAGATG 
    GCAAAACATG GGATCAGCCC AGATGAAGTG ACCATGGCAA CTGTGATTTC AGCTTGTGCT 
    CATCTTGGAG CCCTTGACTT AGGGAAGGAA ATACATTACT ACATTATGCA GCATGGATTT 
    AACCTTGATG TCTACATAGG TTCGGCATTG ATTGATATGT ATGCTAAGTG TGGGAGTCTA 
    GATAGGTCCC TTTTGATGTT CTTCAAGTTG CGAGAGAAGA ACTTGTTCTG TTGGAATTCA 
    GTGATTGAAG GGCTTGCTGT TCATGGATAT GCAGAAGAAG CACTGGCAAT GTTTGACAAG 
    ATGGAGAGGG AGAAAATTAA GCCAAATGGG GTTACATTTG TAAGTGTTTT AAGTGCCTGC 
    AATCATGCAG GACTTATTGA AGAAGGTCGT AAGAGGTTTG CGAGTATGAC ACGAGATCAT 
    TCCATCCCTC CTGGAGTTGA ACATTATGGA TGCATGGTTG ATCTCTTGAG CAAAGCTGGC 
    TTGCTTGAAG AAGCACTGCA ATTGATAAGA ACAATGAAGT TGGAACCTAA TGCTGTTATT 
    TGGGGTGCGT TGCTAAGTGG ATGTAAGCTT CACAGGAACT TGGAGATTGC TCAGGTTGCT 
    GCTAATAAAT TGATGGTTTT GGAGCCTGGC AACAGTGGAT ATTACACTCT TTTGGTTAAC 
    ATGAATGCTG AAGTTAACAG ATGGGGCGAG GCTGCAAAGA TCAGGTTAAC CATGAAGGAG 
    CAGGGGGTAG AAAAAAGATG CCCTGGGTCC AGTTGGATCG AGATGGAAAG TCAAGTTCAT 
    CAATTTGCGG CATCTGATAA ATCTCATGCA GCTTCTGATG AGATTTACTC GTTGCTGGCT 
    GAATTAGATG GGCAGATGAA GCTAGCGGGC TACGTACCTG AACTATGGTC TGTTTTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450820.1
    CDS541..2220
    Translation

    Target ORF information:

    RefSeq Version XM_024595052.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595052.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCTTCTA ACTGTTATTC AATTCAAACC ATAGTTAACC ACTTAAAGCA CTGCAGCAAG 
    CTGAAACAGC TACAATCCAT GTATGCTGTC ATGGTCAAAA CCAATACAAA CCAAGATTGT 
    TACTTAATGA ATCAATTTAT ATCAGCTCTT TCTACTTTTA ACCGTATGGA TTATGCAGTT 
    TTAGCCTATA CCCAGATGGA AATTCCTAAT GTTTTTGTGT ATAATGCAAT GATTAAAGGG 
    TTTGTTCAAA GCTATCAACC AGTTCAGGCT CTTGAATTGT ACGTTCAAAT GCTAAGAGCT 
    AATGTTTCTC CTACAAGTTA TACATTTCCT TCGTTGATAA AAGCTTGTGG CTTGGTATCA 
    CAGTTGAGGT TTGCAGAAGC TGTTCATGGT CATGTTTGGA GAAATGGGTT TGATTCACAC 
    GTGTTTGTTC AAACTTCTTT GGTTGATTTT TACTCAAGTA TGGGTAGAAT TGAAGAATCT 
    GTAAGGGTGT TTGATGAAAT GCCTGAAAGA GATGTCTTTG CTTGGACTAC AATGGTTTCT 
    GGTCTTGTGC GGGTCGGTGA TATGAGTTCT GCTGGGAGAT TGTTTGATAT GATGCCTGAT 
    AGGAATTTAG CTACTTGGAA TACTTTGATT GATGGGTATG CAAGATTGAG AGAAGTTGAT 
    GTGGCGGAGT TGTTGTTTAA TCAAATGCCA GCAAGAGATA TTATTTCATG GACTACAATG 
    ATCAATTGTT ATTCTCAGAA TAAGAGATTT AGAGAAGCAT TGGGGGTTTT TAATGAGATG 
    GCAAAACATG GGATCAGCCC AGATGAAGTG ACCATGGCAA CTGTGATTTC AGCTTGTGCT 
    CATCTTGGAG CCCTTGACTT AGGGAAGGAA ATACATTACT ACATTATGCA GCATGGATTT 
    AACCTTGATG TCTACATAGG TTCGGCATTG ATTGATATGT ATGCTAAGTG TGGGAGTCTA 
    GATAGGTCCC TTTTGATGTT CTTCAAGTTG CGAGAGAAGA ACTTGTTCTG TTGGAATTCA 
    GTGATTGAAG GGCTTGCTGT TCATGGATAT GCAGAAGAAG CACTGGCAAT GTTTGACAAG 
    ATGGAGAGGG AGAAAATTAA GCCAAATGGG GTTACATTTG TAAGTGTTTT AAGTGCCTGC 
    AATCATGCAG GACTTATTGA AGAAGGTCGT AAGAGGTTTG CGAGTATGAC ACGAGATCAT 
    TCCATCCCTC CTGGAGTTGA ACATTATGGA TGCATGGTTG ATCTCTTGAG CAAAGCTGGC 
    TTGCTTGAAG AAGCACTGCA ATTGATAAGA ACAATGAAGT TGGAACCTAA TGCTGTTATT 
    TGGGGTGCGT TGCTAAGTGG ATGTAAGCTT CACAGGAACT TGGAGATTGC TCAGGTTGCT 
    GCTAATAAAT TGATGGTTTT GGAGCCTGGC AACAGTGGAT ATTACACTCT TTTGGTTAAC 
    ATGAATGCTG AAGTTAACAG ATGGGGCGAG GCTGCAAAGA TCAGGTTAAC CATGAAGGAG 
    CAGGGGGTAG AAAAAAGATG CCCTGGGTCC AGTTGGATCG AGATGGAAAG TCAAGTTCAT 
    CAATTTGCGG CATCTGATAA ATCTCATGCA GCTTCTGATG AGATTTACTC GTTGCTGGCT 
    GAATTAGATG GGCAGATGAA GCTAGCGGGC TACGTACCTG AACTATGGTC TGTTTTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7459554 ( XM_024595051.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450819.1 Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa424427
    Clone ID Related Accession (Same CDS sequence) XM_024595052.1 , XM_024595051.1
    Accession Version XM_024595051.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1680bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product pentatricopeptide repeat-containing protein At1g06143
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCTTCTA ACTGTTATTC AATTCAAACC ATAGTTAACC ACTTAAAGCA CTGCAGCAAG 
    CTGAAACAGC TACAATCCAT GTATGCTGTC ATGGTCAAAA CCAATACAAA CCAAGATTGT 
    TACTTAATGA ATCAATTTAT ATCAGCTCTT TCTACTTTTA ACCGTATGGA TTATGCAGTT 
    TTAGCCTATA CCCAGATGGA AATTCCTAAT GTTTTTGTGT ATAATGCAAT GATTAAAGGG 
    TTTGTTCAAA GCTATCAACC AGTTCAGGCT CTTGAATTGT ACGTTCAAAT GCTAAGAGCT 
    AATGTTTCTC CTACAAGTTA TACATTTCCT TCGTTGATAA AAGCTTGTGG CTTGGTATCA 
    CAGTTGAGGT TTGCAGAAGC TGTTCATGGT CATGTTTGGA GAAATGGGTT TGATTCACAC 
    GTGTTTGTTC AAACTTCTTT GGTTGATTTT TACTCAAGTA TGGGTAGAAT TGAAGAATCT 
    GTAAGGGTGT TTGATGAAAT GCCTGAAAGA GATGTCTTTG CTTGGACTAC AATGGTTTCT 
    GGTCTTGTGC GGGTCGGTGA TATGAGTTCT GCTGGGAGAT TGTTTGATAT GATGCCTGAT 
    AGGAATTTAG CTACTTGGAA TACTTTGATT GATGGGTATG CAAGATTGAG AGAAGTTGAT 
    GTGGCGGAGT TGTTGTTTAA TCAAATGCCA GCAAGAGATA TTATTTCATG GACTACAATG 
    ATCAATTGTT ATTCTCAGAA TAAGAGATTT AGAGAAGCAT TGGGGGTTTT TAATGAGATG 
    GCAAAACATG GGATCAGCCC AGATGAAGTG ACCATGGCAA CTGTGATTTC AGCTTGTGCT 
    CATCTTGGAG CCCTTGACTT AGGGAAGGAA ATACATTACT ACATTATGCA GCATGGATTT 
    AACCTTGATG TCTACATAGG TTCGGCATTG ATTGATATGT ATGCTAAGTG TGGGAGTCTA 
    GATAGGTCCC TTTTGATGTT CTTCAAGTTG CGAGAGAAGA ACTTGTTCTG TTGGAATTCA 
    GTGATTGAAG GGCTTGCTGT TCATGGATAT GCAGAAGAAG CACTGGCAAT GTTTGACAAG 
    ATGGAGAGGG AGAAAATTAA GCCAAATGGG GTTACATTTG TAAGTGTTTT AAGTGCCTGC 
    AATCATGCAG GACTTATTGA AGAAGGTCGT AAGAGGTTTG CGAGTATGAC ACGAGATCAT 
    TCCATCCCTC CTGGAGTTGA ACATTATGGA TGCATGGTTG ATCTCTTGAG CAAAGCTGGC 
    TTGCTTGAAG AAGCACTGCA ATTGATAAGA ACAATGAAGT TGGAACCTAA TGCTGTTATT 
    TGGGGTGCGT TGCTAAGTGG ATGTAAGCTT CACAGGAACT TGGAGATTGC TCAGGTTGCT 
    GCTAATAAAT TGATGGTTTT GGAGCCTGGC AACAGTGGAT ATTACACTCT TTTGGTTAAC 
    ATGAATGCTG AAGTTAACAG ATGGGGCGAG GCTGCAAAGA TCAGGTTAAC CATGAAGGAG 
    CAGGGGGTAG AAAAAAGATG CCCTGGGTCC AGTTGGATCG AGATGGAAAG TCAAGTTCAT 
    CAATTTGCGG CATCTGATAA ATCTCATGCA GCTTCTGATG AGATTTACTC GTTGCTGGCT 
    GAATTAGATG GGCAGATGAA GCTAGCGGGC TACGTACCTG AACTATGGTC TGTTTTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450819.1
    CDS541..2220
    Translation

    Target ORF information:

    RefSeq Version XM_024595051.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pentatricopeptide repeat-containing protein At1g06143 (LOC7459554), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595051.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCTTCTA ACTGTTATTC AATTCAAACC ATAGTTAACC ACTTAAAGCA CTGCAGCAAG 
    CTGAAACAGC TACAATCCAT GTATGCTGTC ATGGTCAAAA CCAATACAAA CCAAGATTGT 
    TACTTAATGA ATCAATTTAT ATCAGCTCTT TCTACTTTTA ACCGTATGGA TTATGCAGTT 
    TTAGCCTATA CCCAGATGGA AATTCCTAAT GTTTTTGTGT ATAATGCAAT GATTAAAGGG 
    TTTGTTCAAA GCTATCAACC AGTTCAGGCT CTTGAATTGT ACGTTCAAAT GCTAAGAGCT 
    AATGTTTCTC CTACAAGTTA TACATTTCCT TCGTTGATAA AAGCTTGTGG CTTGGTATCA 
    CAGTTGAGGT TTGCAGAAGC TGTTCATGGT CATGTTTGGA GAAATGGGTT TGATTCACAC 
    GTGTTTGTTC AAACTTCTTT GGTTGATTTT TACTCAAGTA TGGGTAGAAT TGAAGAATCT 
    GTAAGGGTGT TTGATGAAAT GCCTGAAAGA GATGTCTTTG CTTGGACTAC AATGGTTTCT 
    GGTCTTGTGC GGGTCGGTGA TATGAGTTCT GCTGGGAGAT TGTTTGATAT GATGCCTGAT 
    AGGAATTTAG CTACTTGGAA TACTTTGATT GATGGGTATG CAAGATTGAG AGAAGTTGAT 
    GTGGCGGAGT TGTTGTTTAA TCAAATGCCA GCAAGAGATA TTATTTCATG GACTACAATG 
    ATCAATTGTT ATTCTCAGAA TAAGAGATTT AGAGAAGCAT TGGGGGTTTT TAATGAGATG 
    GCAAAACATG GGATCAGCCC AGATGAAGTG ACCATGGCAA CTGTGATTTC AGCTTGTGCT 
    CATCTTGGAG CCCTTGACTT AGGGAAGGAA ATACATTACT ACATTATGCA GCATGGATTT 
    AACCTTGATG TCTACATAGG TTCGGCATTG ATTGATATGT ATGCTAAGTG TGGGAGTCTA 
    GATAGGTCCC TTTTGATGTT CTTCAAGTTG CGAGAGAAGA ACTTGTTCTG TTGGAATTCA 
    GTGATTGAAG GGCTTGCTGT TCATGGATAT GCAGAAGAAG CACTGGCAAT GTTTGACAAG 
    ATGGAGAGGG AGAAAATTAA GCCAAATGGG GTTACATTTG TAAGTGTTTT AAGTGCCTGC 
    AATCATGCAG GACTTATTGA AGAAGGTCGT AAGAGGTTTG CGAGTATGAC ACGAGATCAT 
    TCCATCCCTC CTGGAGTTGA ACATTATGGA TGCATGGTTG ATCTCTTGAG CAAAGCTGGC 
    TTGCTTGAAG AAGCACTGCA ATTGATAAGA ACAATGAAGT TGGAACCTAA TGCTGTTATT 
    TGGGGTGCGT TGCTAAGTGG ATGTAAGCTT CACAGGAACT TGGAGATTGC TCAGGTTGCT 
    GCTAATAAAT TGATGGTTTT GGAGCCTGGC AACAGTGGAT ATTACACTCT TTTGGTTAAC 
    ATGAATGCTG AAGTTAACAG ATGGGGCGAG GCTGCAAAGA TCAGGTTAAC CATGAAGGAG 
    CAGGGGGTAG AAAAAAGATG CCCTGGGTCC AGTTGGATCG AGATGGAAAG TCAAGTTCAT 
    CAATTTGCGG CATCTGATAA ATCTCATGCA GCTTCTGATG AGATTTACTC GTTGCTGGCT 
    GAATTAGATG GGCAGATGAA GCTAGCGGGC TACGTACCTG AACTATGGTC TGTTTTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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