COL28A1 cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL28A1
Entrez Gene ID	102072397
Full Name	collagen type XXVIII alpha 1 chain
Gene Type	protein-coding
Organism	Zonotrichia albicollis(white-throated sparrow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005480804.2	XP_005480861.1	collagen alpha-1(XXVIII) chain
XM_005480804.3	XP_005480861.1	collagen alpha-1(XXVIII) chain

Pathways from BioSystems
Gene Ontology

The following COL28A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL28A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OZo01787	XM_005480804.3 Latest version!	Zonotrichia albicollis collagen type XXVIII alpha 1 chain (COL28A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$713.30 $1019.00
View Old Accession Versions >>
OZo01787	XM_005480804.2	Zonotrichia albicollis collagen, type XXVIII, alpha 1 (COL28A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$713.30 $1019.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL28A1 ( XM_005480804.2 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_005480861.1 Zonotrichia albicollis collagen, type XXVIII, alpha 1 (COL28A1), mRNA.

Price & Availability↑

CloneID	OZo01787
Clone ID Related Accession (Same CDS sequence)	XM_005480804.2 , XM_005480804.3
Accession Version	XM_005480804.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3504bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-20
Organism	Zonotrichia albicollis(white-throated sparrow)
Product	collagen alpha-1(XXVIII) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081540.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 21, 2015 this sequence version replaced XM_005480804.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zonotrichia albicollis Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAAGTCA CTATGAGGAA AAAATGTTTT CTCTTTTACT TTATACTTCT GGCTGTGATA 
ACAAACCAGA GAGTGCATGG GCAAAACAGA AAAAGAGGAA AGAATATTTA CTCTCCTATG 
CCAAAAGATG AAGGTGATGA GTGTCTCATT GATATAGTCT TTATCATAGA CAGTTCAGAA 
AGTGCCAAAA ATCAGTTGTT TGATACACAG AAGAACTTTG TTCATAACAT AACTGACAGC 
ATTTTCCAGA TGAAGCCAGT TAAGTCCCAC ATGTATAGTG TCAAACTAGC AAGTATGCAG 
TTCAGCAGCA CAGTCATCAT TGATCATCCA TTTACAGCCT GGAAAAATGT CCAGAATTTT 
AAGGAGAAAA TCAGTTCTCT GGGCTTTATT GGCCAAGGCA CTTACTCCTA TTATGCAGTT 
TCAAATGCCA CTCATCTCTT CAAAACTCAA AGTCGTAAGA GAAGTGTGAA AGTGGCTTTT 
TTGATGACTG ATGGTGTGGA TCACCCAAAC AGCCCTAATG TCCAGGGTAT AGCCACAACA 
GCTAGAAGTC TTGGGATACA TTTTGTTACC ATTGGCCTTT CTAAGAAAGC AGTCCAGAAA 
CAAAAATTGC GCATGATATC TGGTGATTCG TCCTCTGAAC GTGTCCTGTG CCTGGATGAT 
GAGAATCTGG TAGTTGATGT AGCATTGGAA CTGGAAGCCT TGCTACAGAA GCAGTGTGTG 
CAGAAGACCT GTGAGTGTGA AAAGGGAGAA AAAGGAGACA AAGGTGAAAA AGGCAATGAT 
GGCAGCAAAG GGGATAAAGG TGACCCAGGA CCAAAAGGAA ACAAGGGTGA TGCTCAAAAA 
GGAGATCAGG GAGAGAAAGG AGAAGAGGGA TCTCCTGGCT ACAAGGGAGA CAAGGGTGAA 
AGAGGAGAAT GTGGAGCTCC AGGACCAAAA GGAGAAATAG GTTTGCAGGG CTCTGTGGGC 
CCTACAGGAC CTCGGGGACC TCAGGGTATC AGGGGAGATC CAGGTCAGCA AGGCCCAAAA 
GGCATCCAAG GAAACAAGGG AGAACAAGGC CCTCCAGGTC CCTATGGTCC TGCAGGACCC 
GCTGGCATTG GAGAGCCAGG ACCCAAGGGT GCTGAAGGTC GAGAAGGTAG AGTTGGATTG 
CGAGGACCTC CTGGAATTGG TGAGCCAGGA TTACCTGGAC CACCTGGCCC TCCTGGTTCA 
CCAGGTGAAA AAGGTTCGAC AGGACAGGGC ATTCCAGGAG ATAAGGGTGA AAAAGGCTCT 
GACGGTGCCC GTGGTCCTGC TGGACCAAAA GGTGACCCAG TCAAAGGTGA CAAGGGTGAC 
CAAGGCCAGG TAGGACCACA GGGCCCACCA GGACCACCAG GACCAAGCCA TCAAGGAAGG 
CAGGGTGCAC AGGGTCCACC AGGAAACCCT GGGGCAAAAG GCTCTCGAGG TTCTGGTTGG 
CCAGGACCAA AGGGTGAACC AGGTACAGCT GGACAAAAAG GAGAACCAGG ACTTCCAGGA 
ATTAGCTCAT CGGGAATTAA AGGAGCTACA GGTCTTCCAG GAACCCCAGG AGAGAAGGGG 
GTGAAGGGAG AGAAAGGATT GACAGGGAAC AAGGGGGAAA AGGGAGAAGA AGGTCCAAGA 
GGCCCACAAG GACCCCCTGG CAAAGGACTT TTAGGTCAAA AGGGTGACCC TGGAGAAAAA 
GGATCCAAAG GAATGATTGG TCCTAAAGGA CTAATAGGCC CAGCTGGACC AAAAGGTGAT 
CGTGGAGAGA CAGGACCCCC TGGTGTACCT GGACAATCTG TTTGGGGACC TCCTGGACCA 
AAGGGGGATC CAGGATACCA GGGACCACCG GGAGATGATG GACTTCCTGG AAATTCAATA 
ATGGGACCAA CGGGGCACCG AGGACTTCCT GGACCACCTG GACCTGAAGG ACCAAAAGCT 
GACAAAGGTG ACAAAGGTGA AGCTGGACCT CCAGGACCAG CAGGCCCTGC AGGACCAGAA 
GGACCCAAAG GCGTGGGAGA TGCTGGACCA AAGGGAGACC ATGGAATCAA AGGTGATCCT 
GGGCCCCCAG GACCTCCAGG ATGGGGACAC ATGGGTCCCA AGGGTATTAT GGGACGCGAT 
GGTTTGCCTG GTCCTCCTGG CCCCCCTGGC ATCAGCATAC AAGGAGACAA GGGAGAAAAA 
GGAAGTAAAG GTTTTCCTGG ACCAAAGGGA TCAGTAGGAA CTGGCCTTCC TGGACAAAAG 
GGAGACTATG GAGATAAAGG TGATACAGGG AGCAAAGGCG CCAAAGGAGA GATTGGAGAC 
CCAGGACCTC CAGGGCCAAA GGGATCTGGG GGAAGAAAAG GTGAACCTGG TCTTTCGAGA 
GAAGATGTTA TCAGACTTAT CCATGAAATA TGTGGTTGTG GTATCAAATG TAAAACAACA 
CCACTGGAAC TAGTATTCGT CATTGACAGC TCAGAAAGTG TTGGGCCAGA AAACTTCAAA 
ATCATCAAAA CCTTTATGAA AACATTCATT GACAAGGTTT CGGCCAACCA CGCTACAACC 
CGCATTGGCA TTATCAACTT CAGCCACAGA GTGGACCTGG TGTCTACTCT GAAGCAATAC 
ACCAGCAAGG AGCACCTGAA ATCAGCTGTT GACGAGATGC CCTACCTAGG AGAAGGCACA 
TACACAGCCT CTGCCATCCA GGAAGCCATC CACTTGTTCC AGGCAGCGCG CCCGGCCGTC 
AGGAAGGTGG CTGTTGTCAT AACGGACGGA CAGGCGGACG ACCGGGATAA AGTACAGCTG 
GACACCATCG TAAGAGAGGC CCATGCTACA AATATTGAGA TTTTTGTCAT TGGGATTGTA 
CAAAGGACTG ATCCTCATTT TGATGACTTC CTGAAAGAAA TGCAGCTCAT TGCAACAGAC 
CCTGATGAAG AACATGTTTA CCAGATAGAC GACTTCGTAA CGCTTTCAGT TCTTGAAAAT 
AAACTGATCA CAAAAATCTG TGAGAACGAG TCTGCAGTGT ACACCAGATA TTACAATATT 
TTATCTCCTT CTCCAAGTCC GGAACCTGAA ATTGCCAGGA CAGATGCTAA TAGCCTGTTA 
CCTAAAACAA CCACTTCAAA GATTGATATA CTTCCTACAG AAGGATCTAG TAACCCACAT 
AATCCATCGC GATCCGCACA CACTGAACCT CTGCCATCTG CTCAGGGCCA CAATGTGACC 
ACCTCTCCTC GCAGTCAATC AATACTTCCC CCAGTTTATA ACATATCTGA AATCCGACCC 
CTGAGCCCAG TTGTCAATCC TTTTGTTGGT GGAACTGCTA CTGAAGATCA CCAGCCAGTT 
GCGTGGCAAG CAGAGGTAGC AAGAACCCAA AAAAATCCAA GGTGCTTGGA ACCTATGAAA 
CCAGGAGATT GTTGGAACTA TGTGGTGAAA TGGTATTATG ACAAGGCTGG CAATTCTTGT 
GGCCAGTTCT GGTATGGAGG TTGTGATGGT ACCAACAATA GATTTGAAAC AGAAAAAGAA 
TGTCGAGAAA CCTGTGTTGA TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005480861.1
CDS	83..3586
Translation	MKVTMRKKCFLFYFILLAVITNQRVHGQNRKRGKNIYSPMPKDEGDECLIDIVFIIDSSESAKNQLFDTQKNFVHNITDSIFQMKPVKSHMYSVKLASMQFSSTVIIDHPFTAWKNVQNFKEKISSLGFIGQGTYSYYAVSNATHLFKTQSRKRSVKVAFLMTDGVDHPNSPNVQGIATTARSLGIHFVTIGLSKKAVQKQKLRMISGDSSSERVLCLDDENLVVDVALELEALLQKQCVQKTCECEKGEKGDKGEKGNDGSKGDKGDPGPKGNKGDAQKGDQGEKGEEGSPGYKGDKGERGECGAPGPKGEIGLQGSVGPTGPRGPQGIRGDPGQQGPKGIQGNKGEQGPPGPYGPAGPAGIGEPGPKGAEGREGRVGLRGPPGIGEPGLPGPPGPPGSPGEKGSTGQGIPGDKGEKGSDGARGPAGPKGDPVKGDKGDQGQVGPQGPPGPPGPSHQGRQGAQGPPGNPGAKGSRGSGWPGPKGEPGTAGQKGEPGLPGISSSGIKGATGLPGTPGEKGVKGEKGLTGNKGEKGEEGPRGPQGPPGKGLLGQKGDPGEKGSKGMIGPKGLIGPAGPKGDRGETGPPGVPGQSVWGPPGPKGDPGYQGPPGDDGLPGNSIMGPTGHRGLPGPPGPEGPKADKGDKGEAGPPGPAGPAGPEGPKGVGDAGPKGDHGIKGDPGPPGPPGWGHMGPKGIMGRDGLPGPPGPPGISIQGDKGEKGSKGFPGPKGSVGTGLPGQKGDYGDKGDTGSKGAKGEIGDPGPPGPKGSGGRKGEPGLSREDVIRLIHEICGCGIKCKTTPLELVFVIDSSESVGPENFKIIKTFMKTFIDKVSANHATTRIGIINFSHRVDLVSTLKQYTSKEHLKSAVDEMPYLGEGTYTASAIQEAIHLFQAARPAVRKVAVVITDGQADDRDKVQLDTIVREAHATNIEIFVIGIVQRTDPHFDDFLKEMQLIATDPDEEHVYQIDDFVTLSVLENKLITKICENESAVYTRYYNILSPSPSPEPEIARTDANSLLPKTTTSKIDILPTEGSSNPHNPSRSAHTEPLPSAQGHNVTTSPRSQSILPPVYNISEIRPLSPVVNPFVGGTATEDHQPVAWQAEVARTQKNPRCLEPMKPGDCWNYVVKWYYDKAGNSCGQFWYGGCDGTNNRFETEKECRETCVD

Target ORF information:

RefSeq Version	XM_005480804.2
Organism	Zonotrichia albicollis(white-throated sparrow)
Definition	Zonotrichia albicollis collagen, type XXVIII, alpha 1 (COL28A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005480804.2

ORF Insert Sequence:

ATGAAAGTCA CTATGAGGAA AAAATGTTTT CTCTTTTACT TTATACTTCT GGCTGTGATA 
ACAAACCAGA GAGTGCATGG GCAAAACAGA AAAAGAGGAA AGAATATTTA CTCTCCTATG 
CCAAAAGATG AAGGTGATGA GTGTCTCATT GATATAGTCT TTATCATAGA CAGTTCAGAA 
AGTGCCAAAA ATCAGTTGTT TGATACACAG AAGAACTTTG TTCATAACAT AACTGACAGC 
ATTTTCCAGA TGAAGCCAGT TAAGTCCCAC ATGTATAGTG TCAAACTAGC AAGTATGCAG 
TTCAGCAGCA CAGTCATCAT TGATCATCCA TTTACAGCCT GGAAAAATGT CCAGAATTTT 
AAGGAGAAAA TCAGTTCTCT GGGCTTTATT GGCCAAGGCA CTTACTCCTA TTATGCAGTT 
TCAAATGCCA CTCATCTCTT CAAAACTCAA AGTCGTAAGA GAAGTGTGAA AGTGGCTTTT 
TTGATGACTG ATGGTGTGGA TCACCCAAAC AGCCCTAATG TCCAGGGTAT AGCCACAACA 
GCTAGAAGTC TTGGGATACA TTTTGTTACC ATTGGCCTTT CTAAGAAAGC AGTCCAGAAA 
CAAAAATTGC GCATGATATC TGGTGATTCG TCCTCTGAAC GTGTCCTGTG CCTGGATGAT 
GAGAATCTGG TAGTTGATGT AGCATTGGAA CTGGAAGCCT TGCTACAGAA GCAGTGTGTG 
CAGAAGACCT GTGAGTGTGA AAAGGGAGAA AAAGGAGACA AAGGTGAAAA AGGCAATGAT 
GGCAGCAAAG GGGATAAAGG TGACCCAGGA CCAAAAGGAA ACAAGGGTGA TGCTCAAAAA 
GGAGATCAGG GAGAGAAAGG AGAAGAGGGA TCTCCTGGCT ACAAGGGAGA CAAGGGTGAA 
AGAGGAGAAT GTGGAGCTCC AGGACCAAAA GGAGAAATAG GTTTGCAGGG CTCTGTGGGC 
CCTACAGGAC CTCGGGGACC TCAGGGTATC AGGGGAGATC CAGGTCAGCA AGGCCCAAAA 
GGCATCCAAG GAAACAAGGG AGAACAAGGC CCTCCAGGTC CCTATGGTCC TGCAGGACCC 
GCTGGCATTG GAGAGCCAGG ACCCAAGGGT GCTGAAGGTC GAGAAGGTAG AGTTGGATTG 
CGAGGACCTC CTGGAATTGG TGAGCCAGGA TTACCTGGAC CACCTGGCCC TCCTGGTTCA 
CCAGGTGAAA AAGGTTCGAC AGGACAGGGC ATTCCAGGAG ATAAGGGTGA AAAAGGCTCT 
GACGGTGCCC GTGGTCCTGC TGGACCAAAA GGTGACCCAG TCAAAGGTGA CAAGGGTGAC 
CAAGGCCAGG TAGGACCACA GGGCCCACCA GGACCACCAG GACCAAGCCA TCAAGGAAGG 
CAGGGTGCAC AGGGTCCACC AGGAAACCCT GGGGCAAAAG GCTCTCGAGG TTCTGGTTGG 
CCAGGACCAA AGGGTGAACC AGGTACAGCT GGACAAAAAG GAGAACCAGG ACTTCCAGGA 
ATTAGCTCAT CGGGAATTAA AGGAGCTACA GGTCTTCCAG GAACCCCAGG AGAGAAGGGG 
GTGAAGGGAG AGAAAGGATT GACAGGGAAC AAGGGGGAAA AGGGAGAAGA AGGTCCAAGA 
GGCCCACAAG GACCCCCTGG CAAAGGACTT TTAGGTCAAA AGGGTGACCC TGGAGAAAAA 
GGATCCAAAG GAATGATTGG TCCTAAAGGA CTAATAGGCC CAGCTGGACC AAAAGGTGAT 
CGTGGAGAGA CAGGACCCCC TGGTGTACCT GGACAATCTG TTTGGGGACC TCCTGGACCA 
AAGGGGGATC CAGGATACCA GGGACCACCG GGAGATGATG GACTTCCTGG AAATTCAATA 
ATGGGACCAA CGGGGCACCG AGGACTTCCT GGACCACCTG GACCTGAAGG ACCAAAAGCT 
GACAAAGGTG ACAAAGGTGA AGCTGGACCT CCAGGACCAG CAGGCCCTGC AGGACCAGAA 
GGACCCAAAG GCGTGGGAGA TGCTGGACCA AAGGGAGACC ATGGAATCAA AGGTGATCCT 
GGGCCCCCAG GACCTCCAGG ATGGGGACAC ATGGGTCCCA AGGGTATTAT GGGACGCGAT 
GGTTTGCCTG GTCCTCCTGG CCCCCCTGGC ATCAGCATAC AAGGAGACAA GGGAGAAAAA 
GGAAGTAAAG GTTTTCCTGG ACCAAAGGGA TCAGTAGGAA CTGGCCTTCC TGGACAAAAG 
GGAGACTATG GAGATAAAGG TGATACAGGG AGCAAAGGCG CCAAAGGAGA GATTGGAGAC 
CCAGGACCTC CAGGGCCAAA GGGATCTGGG GGAAGAAAAG GTGAACCTGG TCTTTCGAGA 
GAAGATGTTA TCAGACTTAT CCATGAAATA TGTGGTTGTG GTATCAAATG TAAAACAACA 
CCACTGGAAC TAGTATTCGT CATTGACAGC TCAGAAAGTG TTGGGCCAGA AAACTTCAAA 
ATCATCAAAA CCTTTATGAA AACATTCATT GACAAGGTTT CGGCCAACCA CGCTACAACC 
CGCATTGGCA TTATCAACTT CAGCCACAGA GTGGACCTGG TGTCTACTCT GAAGCAATAC 
ACCAGCAAGG AGCACCTGAA ATCAGCTGTT GACGAGATGC CCTACCTAGG AGAAGGCACA 
TACACAGCCT CTGCCATCCA GGAAGCCATC CACTTGTTCC AGGCAGCGCG CCCGGCCGTC 
AGGAAGGTGG CTGTTGTCAT AACGGACGGA CAGGCGGACG ACCGGGATAA AGTACAGCTG 
GACACCATCG TAAGAGAGGC CCATGCTACA AATATTGAGA TTTTTGTCAT TGGGATTGTA 
CAAAGGACTG ATCCTCATTT TGATGACTTC CTGAAAGAAA TGCAGCTCAT TGCAACAGAC 
CCTGATGAAG AACATGTTTA CCAGATAGAC GACTTCGTAA CGCTTTCAGT TCTTGAAAAT 
AAACTGATCA CAAAAATCTG TGAGAACGAG TCTGCAGTGT ACACCAGATA TTACAATATT 
TTATCTCCTT CTCCAAGTCC GGAACCTGAA ATTGCCAGGA CAGATGCTAA TAGCCTGTTA 
CCTAAAACAA CCACTTCAAA GATTGATATA CTTCCTACAG AAGGATCTAG TAACCCACAT 
AATCCATCGC GATCCGCACA CACTGAACCT CTGCCATCTG CTCAGGGCCA CAATGTGACC 
ACCTCTCCTC GCAGTCAATC AATACTTCCC CCAGTTTATA ACATATCTGA AATCCGACCC 
CTGAGCCCAG TTGTCAATCC TTTTGTTGGT GGAACTGCTA CTGAAGATCA CCAGCCAGTT 
GCGTGGCAAG CAGAGGTAGC AAGAACCCAA AAAAATCCAA GGTGCTTGGA ACCTATGAAA 
CCAGGAGATT GTTGGAACTA TGTGGTGAAA TGGTATTATG ACAAGGCTGG CAATTCTTGT 
GGCCAGTTCT GGTATGGAGG TTGTGATGGT ACCAACAATA GATTTGAAAC AGAAAAAGAA 
TGTCGAGAAA CCTGTGTTGA TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

COL28A1 ( XM_005480804.3 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_005480861.1 Zonotrichia albicollis collagen type XXVIII alpha 1 chain (COL28A1), mRNA.

Price & Availability↑

CloneID	OZo01787
Clone ID Related Accession (Same CDS sequence)	XM_005480804.2 , XM_005480804.3
Accession Version	XM_005480804.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3504bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-10-14
Organism	Zonotrichia albicollis(white-throated sparrow)
Product	collagen alpha-1(XXVIII) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081540.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Oct 15, 2018 this sequence version replaced XM_005480804.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zonotrichia albicollis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAAGTCA CTATGAGGAA AAAATGTTTT CTCTTTTACT TTATACTTCT GGCTGTGATA 
ACAAACCAGA GAGTGCATGG GCAAAACAGA AAAAGAGGAA AGAATATTTA CTCTCCTATG 
CCAAAAGATG AAGGTGATGA GTGTCTCATT GATATAGTCT TTATCATAGA CAGTTCAGAA 
AGTGCCAAAA ATCAGTTGTT TGATACACAG AAGAACTTTG TTCATAACAT AACTGACAGC 
ATTTTCCAGA TGAAGCCAGT TAAGTCCCAC ATGTATAGTG TCAAACTAGC AAGTATGCAG 
TTCAGCAGCA CAGTCATCAT TGATCATCCA TTTACAGCCT GGAAAAATGT CCAGAATTTT 
AAGGAGAAAA TCAGTTCTCT GGGCTTTATT GGCCAAGGCA CTTACTCCTA TTATGCAGTT 
TCAAATGCCA CTCATCTCTT CAAAACTCAA AGTCGTAAGA GAAGTGTGAA AGTGGCTTTT 
TTGATGACTG ATGGTGTGGA TCACCCAAAC AGCCCTAATG TCCAGGGTAT AGCCACAACA 
GCTAGAAGTC TTGGGATACA TTTTGTTACC ATTGGCCTTT CTAAGAAAGC AGTCCAGAAA 
CAAAAATTGC GCATGATATC TGGTGATTCG TCCTCTGAAC GTGTCCTGTG CCTGGATGAT 
GAGAATCTGG TAGTTGATGT AGCATTGGAA CTGGAAGCCT TGCTACAGAA GCAGTGTGTG 
CAGAAGACCT GTGAGTGTGA AAAGGGAGAA AAAGGAGACA AAGGTGAAAA AGGCAATGAT 
GGCAGCAAAG GGGATAAAGG TGACCCAGGA CCAAAAGGAA ACAAGGGTGA TGCTCAAAAA 
GGAGATCAGG GAGAGAAAGG AGAAGAGGGA TCTCCTGGCT ACAAGGGAGA CAAGGGTGAA 
AGAGGAGAAT GTGGAGCTCC AGGACCAAAA GGAGAAATAG GTTTGCAGGG CTCTGTGGGC 
CCTACAGGAC CTCGGGGACC TCAGGGTATC AGGGGAGATC CAGGTCAGCA AGGCCCAAAA 
GGCATCCAAG GAAACAAGGG AGAACAAGGC CCTCCAGGTC CCTATGGTCC TGCAGGACCC 
GCTGGCATTG GAGAGCCAGG ACCCAAGGGT GCTGAAGGTC GAGAAGGTAG AGTTGGATTG 
CGAGGACCTC CTGGAATTGG TGAGCCAGGA TTACCTGGAC CACCTGGCCC TCCTGGTTCA 
CCAGGTGAAA AAGGTTCGAC AGGACAGGGC ATTCCAGGAG ATAAGGGTGA AAAAGGCTCT 
GACGGTGCCC GTGGTCCTGC TGGACCAAAA GGTGACCCAG TCAAAGGTGA CAAGGGTGAC 
CAAGGCCAGG TAGGACCACA GGGCCCACCA GGACCACCAG GACCAAGCCA TCAAGGAAGG 
CAGGGTGCAC AGGGTCCACC AGGAAACCCT GGGGCAAAAG GCTCTCGAGG TTCTGGTTGG 
CCAGGACCAA AGGGTGAACC AGGTACAGCT GGACAAAAAG GAGAACCAGG ACTTCCAGGA 
ATTAGCTCAT CGGGAATTAA AGGAGCTACA GGTCTTCCAG GAACCCCAGG AGAGAAGGGG 
GTGAAGGGAG AGAAAGGATT GACAGGGAAC AAGGGGGAAA AGGGAGAAGA AGGTCCAAGA 
GGCCCACAAG GACCCCCTGG CAAAGGACTT TTAGGTCAAA AGGGTGACCC TGGAGAAAAA 
GGATCCAAAG GAATGATTGG TCCTAAAGGA CTAATAGGCC CAGCTGGACC AAAAGGTGAT 
CGTGGAGAGA CAGGACCCCC TGGTGTACCT GGACAATCTG TTTGGGGACC TCCTGGACCA 
AAGGGGGATC CAGGATACCA GGGACCACCG GGAGATGATG GACTTCCTGG AAATTCAATA 
ATGGGACCAA CGGGGCACCG AGGACTTCCT GGACCACCTG GACCTGAAGG ACCAAAAGCT 
GACAAAGGTG ACAAAGGTGA AGCTGGACCT CCAGGACCAG CAGGCCCTGC AGGACCAGAA 
GGACCCAAAG GCGTGGGAGA TGCTGGACCA AAGGGAGACC ATGGAATCAA AGGTGATCCT 
GGGCCCCCAG GACCTCCAGG ATGGGGACAC ATGGGTCCCA AGGGTATTAT GGGACGCGAT 
GGTTTGCCTG GTCCTCCTGG CCCCCCTGGC ATCAGCATAC AAGGAGACAA GGGAGAAAAA 
GGAAGTAAAG GTTTTCCTGG ACCAAAGGGA TCAGTAGGAA CTGGCCTTCC TGGACAAAAG 
GGAGACTATG GAGATAAAGG TGATACAGGG AGCAAAGGCG CCAAAGGAGA GATTGGAGAC 
CCAGGACCTC CAGGGCCAAA GGGATCTGGG GGAAGAAAAG GTGAACCTGG TCTTTCGAGA 
GAAGATGTTA TCAGACTTAT CCATGAAATA TGTGGTTGTG GTATCAAATG TAAAACAACA 
CCACTGGAAC TAGTATTCGT CATTGACAGC TCAGAAAGTG TTGGGCCAGA AAACTTCAAA 
ATCATCAAAA CCTTTATGAA AACATTCATT GACAAGGTTT CGGCCAACCA CGCTACAACC 
CGCATTGGCA TTATCAACTT CAGCCACAGA GTGGACCTGG TGTCTACTCT GAAGCAATAC 
ACCAGCAAGG AGCACCTGAA ATCAGCTGTT GACGAGATGC CCTACCTAGG AGAAGGCACA 
TACACAGCCT CTGCCATCCA GGAAGCCATC CACTTGTTCC AGGCAGCGCG CCCGGCCGTC 
AGGAAGGTGG CTGTTGTCAT AACGGACGGA CAGGCGGACG ACCGGGATAA AGTACAGCTG 
GACACCATCG TAAGAGAGGC CCATGCTACA AATATTGAGA TTTTTGTCAT TGGGATTGTA 
CAAAGGACTG ATCCTCATTT TGATGACTTC CTGAAAGAAA TGCAGCTCAT TGCAACAGAC 
CCTGATGAAG AACATGTTTA CCAGATAGAC GACTTCGTAA CGCTTTCAGT TCTTGAAAAT 
AAACTGATCA CAAAAATCTG TGAGAACGAG TCTGCAGTGT ACACCAGATA TTACAATATT 
TTATCTCCTT CTCCAAGTCC GGAACCTGAA ATTGCCAGGA CAGATGCTAA TAGCCTGTTA 
CCTAAAACAA CCACTTCAAA GATTGATATA CTTCCTACAG AAGGATCTAG TAACCCACAT 
AATCCATCGC GATCCGCACA CACTGAACCT CTGCCATCTG CTCAGGGCCA CAATGTGACC 
ACCTCTCCTC GCAGTCAATC AATACTTCCC CCAGTTTATA ACATATCTGA AATCCGACCC 
CTGAGCCCAG TTGTCAATCC TTTTGTTGGT GGAACTGCTA CTGAAGATCA CCAGCCAGTT 
GCGTGGCAAG CAGAGGTAGC AAGAACCCAA AAAAATCCAA GGTGCTTGGA ACCTATGAAA 
CCAGGAGATT GTTGGAACTA TGTGGTGAAA TGGTATTATG ACAAGGCTGG CAATTCTTGT 
GGCCAGTTCT GGTATGGAGG TTGTGATGGT ACCAACAATA GATTTGAAAC AGAAAAAGAA 
TGTCGAGAAA CCTGTGTTGA TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005480861.1
CDS	83..3586
Translation	MKVTMRKKCFLFYFILLAVITNQRVHGQNRKRGKNIYSPMPKDEGDECLIDIVFIIDSSESAKNQLFDTQKNFVHNITDSIFQMKPVKSHMYSVKLASMQFSSTVIIDHPFTAWKNVQNFKEKISSLGFIGQGTYSYYAVSNATHLFKTQSRKRSVKVAFLMTDGVDHPNSPNVQGIATTARSLGIHFVTIGLSKKAVQKQKLRMISGDSSSERVLCLDDENLVVDVALELEALLQKQCVQKTCECEKGEKGDKGEKGNDGSKGDKGDPGPKGNKGDAQKGDQGEKGEEGSPGYKGDKGERGECGAPGPKGEIGLQGSVGPTGPRGPQGIRGDPGQQGPKGIQGNKGEQGPPGPYGPAGPAGIGEPGPKGAEGREGRVGLRGPPGIGEPGLPGPPGPPGSPGEKGSTGQGIPGDKGEKGSDGARGPAGPKGDPVKGDKGDQGQVGPQGPPGPPGPSHQGRQGAQGPPGNPGAKGSRGSGWPGPKGEPGTAGQKGEPGLPGISSSGIKGATGLPGTPGEKGVKGEKGLTGNKGEKGEEGPRGPQGPPGKGLLGQKGDPGEKGSKGMIGPKGLIGPAGPKGDRGETGPPGVPGQSVWGPPGPKGDPGYQGPPGDDGLPGNSIMGPTGHRGLPGPPGPEGPKADKGDKGEAGPPGPAGPAGPEGPKGVGDAGPKGDHGIKGDPGPPGPPGWGHMGPKGIMGRDGLPGPPGPPGISIQGDKGEKGSKGFPGPKGSVGTGLPGQKGDYGDKGDTGSKGAKGEIGDPGPPGPKGSGGRKGEPGLSREDVIRLIHEICGCGIKCKTTPLELVFVIDSSESVGPENFKIIKTFMKTFIDKVSANHATTRIGIINFSHRVDLVSTLKQYTSKEHLKSAVDEMPYLGEGTYTASAIQEAIHLFQAARPAVRKVAVVITDGQADDRDKVQLDTIVREAHATNIEIFVIGIVQRTDPHFDDFLKEMQLIATDPDEEHVYQIDDFVTLSVLENKLITKICENESAVYTRYYNILSPSPSPEPEIARTDANSLLPKTTTSKIDILPTEGSSNPHNPSRSAHTEPLPSAQGHNVTTSPRSQSILPPVYNISEIRPLSPVVNPFVGGTATEDHQPVAWQAEVARTQKNPRCLEPMKPGDCWNYVVKWYYDKAGNSCGQFWYGGCDGTNNRFETEKECRETCVD

Target ORF information:

RefSeq Version	XM_005480804.3
Organism	Zonotrichia albicollis(white-throated sparrow)
Definition	Zonotrichia albicollis collagen type XXVIII alpha 1 chain (COL28A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005480804.3

ORF Insert Sequence:

ATGAAAGTCA CTATGAGGAA AAAATGTTTT CTCTTTTACT TTATACTTCT GGCTGTGATA 
ACAAACCAGA GAGTGCATGG GCAAAACAGA AAAAGAGGAA AGAATATTTA CTCTCCTATG 
CCAAAAGATG AAGGTGATGA GTGTCTCATT GATATAGTCT TTATCATAGA CAGTTCAGAA 
AGTGCCAAAA ATCAGTTGTT TGATACACAG AAGAACTTTG TTCATAACAT AACTGACAGC 
ATTTTCCAGA TGAAGCCAGT TAAGTCCCAC ATGTATAGTG TCAAACTAGC AAGTATGCAG 
TTCAGCAGCA CAGTCATCAT TGATCATCCA TTTACAGCCT GGAAAAATGT CCAGAATTTT 
AAGGAGAAAA TCAGTTCTCT GGGCTTTATT GGCCAAGGCA CTTACTCCTA TTATGCAGTT 
TCAAATGCCA CTCATCTCTT CAAAACTCAA AGTCGTAAGA GAAGTGTGAA AGTGGCTTTT 
TTGATGACTG ATGGTGTGGA TCACCCAAAC AGCCCTAATG TCCAGGGTAT AGCCACAACA 
GCTAGAAGTC TTGGGATACA TTTTGTTACC ATTGGCCTTT CTAAGAAAGC AGTCCAGAAA 
CAAAAATTGC GCATGATATC TGGTGATTCG TCCTCTGAAC GTGTCCTGTG CCTGGATGAT 
GAGAATCTGG TAGTTGATGT AGCATTGGAA CTGGAAGCCT TGCTACAGAA GCAGTGTGTG 
CAGAAGACCT GTGAGTGTGA AAAGGGAGAA AAAGGAGACA AAGGTGAAAA AGGCAATGAT 
GGCAGCAAAG GGGATAAAGG TGACCCAGGA CCAAAAGGAA ACAAGGGTGA TGCTCAAAAA 
GGAGATCAGG GAGAGAAAGG AGAAGAGGGA TCTCCTGGCT ACAAGGGAGA CAAGGGTGAA 
AGAGGAGAAT GTGGAGCTCC AGGACCAAAA GGAGAAATAG GTTTGCAGGG CTCTGTGGGC 
CCTACAGGAC CTCGGGGACC TCAGGGTATC AGGGGAGATC CAGGTCAGCA AGGCCCAAAA 
GGCATCCAAG GAAACAAGGG AGAACAAGGC CCTCCAGGTC CCTATGGTCC TGCAGGACCC 
GCTGGCATTG GAGAGCCAGG ACCCAAGGGT GCTGAAGGTC GAGAAGGTAG AGTTGGATTG 
CGAGGACCTC CTGGAATTGG TGAGCCAGGA TTACCTGGAC CACCTGGCCC TCCTGGTTCA 
CCAGGTGAAA AAGGTTCGAC AGGACAGGGC ATTCCAGGAG ATAAGGGTGA AAAAGGCTCT 
GACGGTGCCC GTGGTCCTGC TGGACCAAAA GGTGACCCAG TCAAAGGTGA CAAGGGTGAC 
CAAGGCCAGG TAGGACCACA GGGCCCACCA GGACCACCAG GACCAAGCCA TCAAGGAAGG 
CAGGGTGCAC AGGGTCCACC AGGAAACCCT GGGGCAAAAG GCTCTCGAGG TTCTGGTTGG 
CCAGGACCAA AGGGTGAACC AGGTACAGCT GGACAAAAAG GAGAACCAGG ACTTCCAGGA 
ATTAGCTCAT CGGGAATTAA AGGAGCTACA GGTCTTCCAG GAACCCCAGG AGAGAAGGGG 
GTGAAGGGAG AGAAAGGATT GACAGGGAAC AAGGGGGAAA AGGGAGAAGA AGGTCCAAGA 
GGCCCACAAG GACCCCCTGG CAAAGGACTT TTAGGTCAAA AGGGTGACCC TGGAGAAAAA 
GGATCCAAAG GAATGATTGG TCCTAAAGGA CTAATAGGCC CAGCTGGACC AAAAGGTGAT 
CGTGGAGAGA CAGGACCCCC TGGTGTACCT GGACAATCTG TTTGGGGACC TCCTGGACCA 
AAGGGGGATC CAGGATACCA GGGACCACCG GGAGATGATG GACTTCCTGG AAATTCAATA 
ATGGGACCAA CGGGGCACCG AGGACTTCCT GGACCACCTG GACCTGAAGG ACCAAAAGCT 
GACAAAGGTG ACAAAGGTGA AGCTGGACCT CCAGGACCAG CAGGCCCTGC AGGACCAGAA 
GGACCCAAAG GCGTGGGAGA TGCTGGACCA AAGGGAGACC ATGGAATCAA AGGTGATCCT 
GGGCCCCCAG GACCTCCAGG ATGGGGACAC ATGGGTCCCA AGGGTATTAT GGGACGCGAT 
GGTTTGCCTG GTCCTCCTGG CCCCCCTGGC ATCAGCATAC AAGGAGACAA GGGAGAAAAA 
GGAAGTAAAG GTTTTCCTGG ACCAAAGGGA TCAGTAGGAA CTGGCCTTCC TGGACAAAAG 
GGAGACTATG GAGATAAAGG TGATACAGGG AGCAAAGGCG CCAAAGGAGA GATTGGAGAC 
CCAGGACCTC CAGGGCCAAA GGGATCTGGG GGAAGAAAAG GTGAACCTGG TCTTTCGAGA 
GAAGATGTTA TCAGACTTAT CCATGAAATA TGTGGTTGTG GTATCAAATG TAAAACAACA 
CCACTGGAAC TAGTATTCGT CATTGACAGC TCAGAAAGTG TTGGGCCAGA AAACTTCAAA 
ATCATCAAAA CCTTTATGAA AACATTCATT GACAAGGTTT CGGCCAACCA CGCTACAACC 
CGCATTGGCA TTATCAACTT CAGCCACAGA GTGGACCTGG TGTCTACTCT GAAGCAATAC 
ACCAGCAAGG AGCACCTGAA ATCAGCTGTT GACGAGATGC CCTACCTAGG AGAAGGCACA 
TACACAGCCT CTGCCATCCA GGAAGCCATC CACTTGTTCC AGGCAGCGCG CCCGGCCGTC 
AGGAAGGTGG CTGTTGTCAT AACGGACGGA CAGGCGGACG ACCGGGATAA AGTACAGCTG 
GACACCATCG TAAGAGAGGC CCATGCTACA AATATTGAGA TTTTTGTCAT TGGGATTGTA 
CAAAGGACTG ATCCTCATTT TGATGACTTC CTGAAAGAAA TGCAGCTCAT TGCAACAGAC 
CCTGATGAAG AACATGTTTA CCAGATAGAC GACTTCGTAA CGCTTTCAGT TCTTGAAAAT 
AAACTGATCA CAAAAATCTG TGAGAACGAG TCTGCAGTGT ACACCAGATA TTACAATATT 
TTATCTCCTT CTCCAAGTCC GGAACCTGAA ATTGCCAGGA CAGATGCTAA TAGCCTGTTA 
CCTAAAACAA CCACTTCAAA GATTGATATA CTTCCTACAG AAGGATCTAG TAACCCACAT 
AATCCATCGC GATCCGCACA CACTGAACCT CTGCCATCTG CTCAGGGCCA CAATGTGACC 
ACCTCTCCTC GCAGTCAATC AATACTTCCC CCAGTTTATA ACATATCTGA AATCCGACCC 
CTGAGCCCAG TTGTCAATCC TTTTGTTGGT GGAACTGCTA CTGAAGATCA CCAGCCAGTT 
GCGTGGCAAG CAGAGGTAGC AAGAACCCAA AAAAATCCAA GGTGCTTGGA ACCTATGAAA 
CCAGGAGATT GTTGGAACTA TGTGGTGAAA TGGTATTATG ACAAGGCTGG CAATTCTTGT 
GGCCAGTTCT GGTATGGAGG TTGTGATGGT ACCAACAATA GATTTGAAAC AGAAAAAGAA 
TGTCGAGAAA CCTGTGTTGA TTGA