COL9A3 cDNA ORF clone, Tyto alba(Barn owl)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL9A3
Entrez Gene ID	104364912
Full Name	collagen type IX alpha 3 chain
Gene Type	protein-coding
Organism	Tyto alba(Barn owl)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009971612.1	XP_009969914.1	collagen alpha-3(IX) chain

Pathways from BioSystems
Gene Ontology

The following COL9A3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OTy05664	XM_009971612.1 Latest version!	Tyto alba collagen, type IX, alpha 3 (COL9A3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL9A3 ( XM_009971612.1 ) cDNA ORF clone, Tyto alba(Barn owl) -> XP_009969914.1 Tyto alba collagen, type IX, alpha 3 (COL9A3), mRNA.

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CloneID	OTy05664
Clone ID Related Accession (Same CDS sequence)	XM_009971612.1
Accession Version	XM_009971612.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2250bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-10-30
Organism	Tyto alba(Barn owl)
Product	collagen alpha-3(IX) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_010013898.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tyto alba Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 16% of CDS bases ##RefSeq-Attributes-END##

ATGCGGAAGG AGAGGACCGG TCCTGCTCTT GTTCTGTGGG GTGGGCTTGG GGGTGAACAC 
CCCCAGGGCT CTTCCCTTGC TGGTCATAAG CAGGCTCCGC TCGCAGCAGC CCTCCAAGCC 
CCGGCTTGCT ATGAGCAATG TGTGGCCGAG GAATTTGGCT CTGCTTTGCC TTCTCTCTTG 
CCATCAGTTG GCCTTGATGG GAACGAGGAG GTGCAAGCTC TGCACGAAGC GGTTCCTGCT 
ACTGCGCTGT TCTCCCTCTG CGGGAGAGTA GGACCACAAG GCCCTCCTGG ACCACGAGGA 
CCCCCTGGAC CATCTGGCAA GGACGGCATA GACGGAGAAC CGGGGCCTCC TGGTTTGCCA 
GGCCCACCAG GGCCAAAAGG TGCACTAGGG AAGCCTGGAG CAGCTGGTGA AGCTGGATTG 
CCTGGCCTAC CTGGAGTGGA TGGTTTAACA GGAACTGATG GCCCATCTGG CCCAAACGGG 
CCTCCAGGAG ACCGTGGTGC ATTAGGACCT GCCGGGCCAC CAGGACCAGC TGGCAAAGGA 
CTACCAGGAC CTCCAGGGCC TCCAGGACCC AGTGGGCTCC CAGGTGGAAA TGGATTTCGG 
GGTCCTTCTG GACCTTTTGG CCTGCCAGGA TTCCCAGGGC CTCCTGGACC ACCTGGACCT 
CCTGGTCTTC CAGGTGCCCT TCCTGATGGC GGTGGGGACC TTCAGTGCCC AGCCCTGTGC 
CCACCGGGTC CTCCAGGTCC CCCAGGAATG CCAGGGTTCA AGGGACACAC TGGCCACAAA 
GGAGAACCTG GCGAAATAGG AAAAGAAGGA GAAAAGGGCA ACCCTGGCCC CCCCGGTCCC 
CCAGGCATTC CCGGCAGCGT TGGCTTGCAG GGCCCAAGAG GACTGAGAGG CCTCCCTGGT 
CCAATGGGTC CAGCTGGTGA CAGAGGTGAC ATTGGTTTCA GAGGGCCACC TGGAATCCCA 
GGACCTCCAG GGAAACCTGG TGACCAAGGA AACAAAGGAC CTCAAGGATT CAGGGGGCCC 
AAAGGCGATA CTGGTAGACC TGGACCAAAA GGAAACCTAG GGGCTCGTGG ACTCATAGGA 
GAACCTGGCA TGCCTGGCAA GGATGGACGG GATGGAGCTC CTGGACTCGA TGGTGAGAAG 
GGTGATGCAG CTCGCATGGG GGCTCCTGGA GAGAAGGGAC CAAATGGACT GCCTGGACTG 
CCTGGAAGAG CAGGTATTAA AGGCTCAAAG GGTGAACCAG GCAGTCCTGG AGAGATGGGA 
GAGGCGGGTC CCTCTGGAGA GCCAGGCATC CCTGGTGATG TTGGTATTCC TGGTGAGAGA 
GGTCTGCCGG GACCCAGAGG AGCAACTGGA CCACTTGGTC TTCAGGGCCC GATAGGAGCC 
CCTGGTGTCA GAGGTTTCCA GGGTCCCAAA GGTGCCAGTG GTGAACCTGG CCTTCCCGGT 
CCAACTGGAA TTCGTGGAGA GTTAGGTGAC AGGGGTCCTA CTGGTGTTCC TGGTCCCAAA 
GGTAACCAGG GCATTGCTGG AGCAGACGGC CTCCCAGGTG ACAAAGGCGA ACTGGGTCCC 
TTTGGTCCCC CCGGCCAAAA AGGAGAGCCA GGAAAGAGAG GAGAACTTGG TCCCAAAGGC 
GTCCAAGGAC CTAATGGGAC ATCTGGAGTA CCAGGGATCC CAGGCCATCC AGGGCCCATG 
GGCCATCAGG GGGAACAAGG NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NGGCATCACG 
GGAAAACCTG GGCCTCCTGG TAAAGAGGCC AGTGAACAAC ATATAAGAGA ACTCTGTGGG 
GAAATGATAA ATGATCAAAT TGCACAGTTA GCTGCTAATC TGAGAAAGCC CTTGTCTCCT 
GGAATGACGG GTCGTCCTGG CCCAGCTGGT CCCCCGGGTC CTCCCGGAGC TGTGGGAAGC 
GTTGGGCATC CCGGTCCCCG GGGTCCCCCT GGGTACAGAG GGCCAACAGG AGAACTTGGT 
GATCCCGGTC TCCGAGGTGA CGCTGGCGAA AAGGGAGATA AAGGACCTGT TGGTCAGGGA 
ATTGATGGGC CTGATGGTGA TCAAGGACTT CAAGGACCAC CTGGTGTACC TGGAATTACT 
AAAAATGGCC GTGATGGTGC TCAGGGTGAA CCCGGTCTTC CAGGGGATCC TGGTACTCCT 
GGTGCTATTG GGGCTCAGGG AACTCCAGGA ATATGTGACA CGTCAGCCTG CATGGGAGCT 
GTTGGAGCAT CGACTTCCAA AAAATCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009969914.1
CDS	1..2250
Translation	MRKERTGPALVLWGGLGGEHPQGSSLAGHKQAPLAAALQAPACYEQCVAEEFGSALPSLLPSVGLDGNEEVQALHEAVPATALFSLCGRVGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPKGALGKPGAAGEAGLPGLPGVDGLTGTDGPSGPNGPPGDRGALGPAGPPGPAGKGLPGPPGPPGPSGLPGGNGFRGPSGPFGLPGFPGPPGPPGPPGLPGALPDGGGDLQCPALCPPGPPGPPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRGDIGFRGPPGIPGPPGKPGDQGNKGPQGFRGPKGDTGRPGPKGNLGARGLIGEPGMPGKDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGERGLPGPRGATGPLGLQGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGELGDRGPTGVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNGTSGVPGIPGHPGPMGHQGEQnullnullnullnullnullnullnullnullnullnullnullGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANLRKPLSPGMTGRPGPAGPPGPPGAVGSVGHPGPRGPPGYRGPTGELGDPGLRGDAGEKGDKGPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGTPGAIGAQGTPGICDTSACMGAVGASTSKKS

Target ORF information:

RefSeq Version	XM_009971612.1
Organism	Tyto alba(Barn owl)
Definition	Tyto alba collagen, type IX, alpha 3 (COL9A3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009971612.1

ORF Insert Sequence:

ATGCGGAAGG AGAGGACCGG TCCTGCTCTT GTTCTGTGGG GTGGGCTTGG GGGTGAACAC 
CCCCAGGGCT CTTCCCTTGC TGGTCATAAG CAGGCTCCGC TCGCAGCAGC CCTCCAAGCC 
CCGGCTTGCT ATGAGCAATG TGTGGCCGAG GAATTTGGCT CTGCTTTGCC TTCTCTCTTG 
CCATCAGTTG GCCTTGATGG GAACGAGGAG GTGCAAGCTC TGCACGAAGC GGTTCCTGCT 
ACTGCGCTGT TCTCCCTCTG CGGGAGAGTA GGACCACAAG GCCCTCCTGG ACCACGAGGA 
CCCCCTGGAC CATCTGGCAA GGACGGCATA GACGGAGAAC CGGGGCCTCC TGGTTTGCCA 
GGCCCACCAG GGCCAAAAGG TGCACTAGGG AAGCCTGGAG CAGCTGGTGA AGCTGGATTG 
CCTGGCCTAC CTGGAGTGGA TGGTTTAACA GGAACTGATG GCCCATCTGG CCCAAACGGG 
CCTCCAGGAG ACCGTGGTGC ATTAGGACCT GCCGGGCCAC CAGGACCAGC TGGCAAAGGA 
CTACCAGGAC CTCCAGGGCC TCCAGGACCC AGTGGGCTCC CAGGTGGAAA TGGATTTCGG 
GGTCCTTCTG GACCTTTTGG CCTGCCAGGA TTCCCAGGGC CTCCTGGACC ACCTGGACCT 
CCTGGTCTTC CAGGTGCCCT TCCTGATGGC GGTGGGGACC TTCAGTGCCC AGCCCTGTGC 
CCACCGGGTC CTCCAGGTCC CCCAGGAATG CCAGGGTTCA AGGGACACAC TGGCCACAAA 
GGAGAACCTG GCGAAATAGG AAAAGAAGGA GAAAAGGGCA ACCCTGGCCC CCCCGGTCCC 
CCAGGCATTC CCGGCAGCGT TGGCTTGCAG GGCCCAAGAG GACTGAGAGG CCTCCCTGGT 
CCAATGGGTC CAGCTGGTGA CAGAGGTGAC ATTGGTTTCA GAGGGCCACC TGGAATCCCA 
GGACCTCCAG GGAAACCTGG TGACCAAGGA AACAAAGGAC CTCAAGGATT CAGGGGGCCC 
AAAGGCGATA CTGGTAGACC TGGACCAAAA GGAAACCTAG GGGCTCGTGG ACTCATAGGA 
GAACCTGGCA TGCCTGGCAA GGATGGACGG GATGGAGCTC CTGGACTCGA TGGTGAGAAG 
GGTGATGCAG CTCGCATGGG GGCTCCTGGA GAGAAGGGAC CAAATGGACT GCCTGGACTG 
CCTGGAAGAG CAGGTATTAA AGGCTCAAAG GGTGAACCAG GCAGTCCTGG AGAGATGGGA 
GAGGCGGGTC CCTCTGGAGA GCCAGGCATC CCTGGTGATG TTGGTATTCC TGGTGAGAGA 
GGTCTGCCGG GACCCAGAGG AGCAACTGGA CCACTTGGTC TTCAGGGCCC GATAGGAGCC 
CCTGGTGTCA GAGGTTTCCA GGGTCCCAAA GGTGCCAGTG GTGAACCTGG CCTTCCCGGT 
CCAACTGGAA TTCGTGGAGA GTTAGGTGAC AGGGGTCCTA CTGGTGTTCC TGGTCCCAAA 
GGTAACCAGG GCATTGCTGG AGCAGACGGC CTCCCAGGTG ACAAAGGCGA ACTGGGTCCC 
TTTGGTCCCC CCGGCCAAAA AGGAGAGCCA GGAAAGAGAG GAGAACTTGG TCCCAAAGGC 
GTCCAAGGAC CTAATGGGAC ATCTGGAGTA CCAGGGATCC CAGGCCATCC AGGGCCCATG 
GGCCATCAGG GGGAACAAGG NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NGGCATCACG 
GGAAAACCTG GGCCTCCTGG TAAAGAGGCC AGTGAACAAC ATATAAGAGA ACTCTGTGGG 
GAAATGATAA ATGATCAAAT TGCACAGTTA GCTGCTAATC TGAGAAAGCC CTTGTCTCCT 
GGAATGACGG GTCGTCCTGG CCCAGCTGGT CCCCCGGGTC CTCCCGGAGC TGTGGGAAGC 
GTTGGGCATC CCGGTCCCCG GGGTCCCCCT GGGTACAGAG GGCCAACAGG AGAACTTGGT 
GATCCCGGTC TCCGAGGTGA CGCTGGCGAA AAGGGAGATA AAGGACCTGT TGGTCAGGGA 
ATTGATGGGC CTGATGGTGA TCAAGGACTT CAAGGACCAC CTGGTGTACC TGGAATTACT 
AAAAATGGCC GTGATGGTGC TCAGGGTGAA CCCGGTCTTC CAGGGGATCC TGGTACTCCT 
GGTGCTATTG GGGCTCAGGG AACTCCAGGA ATATGTGACA CGTCAGCCTG CATGGGAGCT 
GTTGGAGCAT CGACTTCCAA AAAATCATAA