Gene Symbol | POFUT1 |
Entrez Gene ID | 397627 |
Full Name | protein O-fucosyltransferase 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » POFUT1 cDNA ORF clone
Gene Symbol | POFUT1 |
Entrez Gene ID | 397627 |
Full Name | protein O-fucosyltransferase 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021077306.1 | XP_020932965.1 | GDP-fucose protein O-fucosyltransferase 1 isoform X2 |
XM_021077305.1 | XP_020932964.1 | GDP-fucose protein O-fucosyltransferase 1 isoform X1 |
NM_001129952.1 | NP_001123424.1 | GDP-fucose protein O-fucosyltransferase 1 precursor |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Molecular evolution of protein O-fucosyltransferase genes and splice variants.
Loriol C, Dupuy F, Rampal R, Dlugosz MA, Haltiwanger RS, Maftah A, Germot A
Glycobiology16(8)736-47(2006 Aug)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
A new superfamily of protein-O-fucosyltransferases, alpha2-fucosyltransferases, and alpha6-fucosyltransferases: phylogeny and identification of conserved peptide motifs.
Martinez-Duncker I, Mollicone R, Candelier JJ, Breton C, Oriol R
Glycobiology13(12)1C-5C(2003 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following POFUT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POFUT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29321 | |
Clone ID Related Accession (Same CDS sequence) | NM_001129952.1 | |
Accession Version | NM_001129952.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1176bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-15 | |
Organism | Sus scrofa(pig) | |
Product | GDP-fucose protein O-fucosyltransferase 1 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ139939.1. ##Evidence-Data-START## Transcript exon combination :: DQ139939.1, AK236627.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1876824, SAMEA1876826 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123424.1 |
CDS | 1..1176 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001129952.1 |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe240945 | |
Clone ID Related Accession (Same CDS sequence) | XM_021077305.1 | |
Accession Version | XM_021077305.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1215bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | GDP-fucose protein O-fucosyltransferase 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020932964.1 |
CDS | 112..1326 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021077305.1 |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe240946 | |
Clone ID Related Accession (Same CDS sequence) | XM_021077306.1 | |
Accession Version | XM_021077306.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | GDP-fucose protein O-fucosyltransferase 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020932965.1 |
CDS | 112..705 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021077306.1 |
1 | ATGGGCGCCG CCGCGTGGGC ATCGTCGCCC CTGCCGCCAC TTGTGTCTCT CCTGCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
Molecular evolution of protein O-fucosyltransferase genes and splice variants. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |
A new superfamily of protein-O-fucosyltransferases, alpha2-fucosyltransferases, and alpha6-fucosyltransferases: phylogeny and identification of conserved peptide motifs. |