| Gene Symbol | SH3YL1 |
| Entrez Gene ID | 100625380 |
| Full Name | SH3 and SYLF domain containing 1 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » SH3YL1 cDNA ORF clone
| Gene Symbol | SH3YL1 |
| Entrez Gene ID | 100625380 |
| Full Name | SH3 and SYLF domain containing 1 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_021085717.1 | XP_020941376.1 | SH3 domain-containing YSC84-like protein 1 isoform X1 |
| XM_021085720.1 | XP_020941379.1 | SH3 domain-containing YSC84-like protein 1 isoform X3 |
| NM_001244340.1 | NP_001231269.1 | SH3 domain-containing YSC84-like protein 1 |
| XM_021085719.1 | XP_020941378.1 | SH3 domain-containing YSC84-like protein 1 isoform X2 |
| XM_021085721.1 | XP_020941380.1 | SH3 domain-containing YSC84-like protein 1 isoform X4 |
| XM_021085718.1 | XP_020941377.1 | SH3 domain-containing YSC84-like protein 1 isoform X1 |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SH3YL1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SH3YL1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe00937 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001244340.1 | |
| Accession Version | NM_001244340.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-10-17 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DN131864.1 and AK347098.1. On Sep 16, 2011 this sequence version replaced XM_003360761.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN02584789 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGAATAACC CTATACCTTC CAATTTGAAA TCTGAAGCAA AGAAGGCTGC TAAAATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001231269.1 |
| CDS | 43..1071 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001244340.1 |
1 | ATGAATAACC CTATACCTTC CAATTTGAAA TCTGAAGCAA AGAAGGCTGC TAAAATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe245200 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021085717.1 , XM_021085718.1 | |
| Accession Version | XM_021085717.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020941376.1 |
| CDS | 247..1650 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021085717.1 |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe245200 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021085717.1 , XM_021085718.1 | |
| Accession Version | XM_021085718.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020941377.1 |
| CDS | 737..2140 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021085718.1 |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe245201 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021085719.1 | |
| Accession Version | XM_021085719.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1275bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020941378.1 |
| CDS | 739..2013 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021085719.1 |
1 | ATGGGCCCCC GGCTGAGCTT CCTCAGGAGG GACAGGCAGG TCATCGCGTG GCCAGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe245202 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021085720.1 | |
| Accession Version | XM_021085720.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAATAACC CTATACCTTC CAATTTGAAA TCTGAAGCAA AGAAGGCTGC TAAAATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020941379.1 |
| CDS | 629..1657 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021085720.1 |
1 | ATGAATAACC CTATACCTTC CAATTTGAAA TCTGAAGCAA AGAAGGCTGC TAAAATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe245203 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021085721.1 | |
| Accession Version | XM_021085721.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | SH3 domain-containing YSC84-like protein 1 isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAAGTGT CAGACTTGGT AATAATTCTG AATTATGGCA GAGCAGTGGA AGCTTTTGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020941380.1 |
| CDS | 387..1130 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021085721.1 |
1 | ATGGAAGTGT CAGACTTGGT AATAATTCTG AATTATGGCA GAGCAGTGGA AGCTTTTGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |