Gene Symbol | PSMF1 |
Entrez Gene ID | 100152620 |
Full Name | proteasome inhibitor subunit 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » PSMF1 cDNA ORF clone
Gene Symbol | PSMF1 |
Entrez Gene ID | 100152620 |
Full Name | proteasome inhibitor subunit 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005672815.2 | XP_005672872.1 | proteasome inhibitor PI31 subunit isoform X2 |
XM_005672814.2 | XP_005672871.1 | proteasome inhibitor PI31 subunit isoform X1 |
NM_001243340.1 | NP_001230269.1 | proteasome inhibitor PI31 subunit |
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, J?rgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornsh?j H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome biology8(4)R45(2007)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PSMF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PSMF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe24820 | |
Clone ID Related Accession (Same CDS sequence) | XM_005672815.2 , NM_001243340.1 | |
Accession Version | NM_001243340.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-10-17 | |
Organism | Sus scrofa(pig) | |
Product | proteasome inhibitor PI31 subunit | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ000691.1, EW504690.2 and BX923235.2. On Aug 11, 2011 this sequence version replaced XM_003134349.1. ##Evidence-Data-START## Transcript exon combination :: CJ022580.1, BP156935.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01915393, SAMN02584787 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGGCT TGGAGGTCCT GTTCGCGTCT GCGGCGCCGA CCATCACCTG CGCGCAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001230269.1 |
CDS | 153..965 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001243340.1 |
1 | ATGGCGGGCT TGGAGGTCCT GTTCGCGTCT GCGGCGCCGA CCATCACCTG CGCGCAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe24819 | |
Clone ID Related Accession (Same CDS sequence) | XM_005672814.2 | |
Accession Version | XM_005672814.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | proteasome inhibitor PI31 subunit isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612558.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005672814.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGAGGC CGGGGGCGCG CATGGCGGGC TTGGAGGTCC TGTTCGCGTC TGCGGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005672871.1 |
CDS | 170..1003 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005672814.2 |
1 | ATGGCGAGGC CGGGGGCGCG CATGGCGGGC TTGGAGGTCC TGTTCGCGTC TGCGGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe24820 | |
Clone ID Related Accession (Same CDS sequence) | XM_005672815.2 , NM_001243340.1 | |
Accession Version | XM_005672815.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | proteasome inhibitor PI31 subunit isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612558.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005672815.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGCT TGGAGGTCCT GTTCGCGTCT GCGGCGCCGA CCATCACCTG CGCGCAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005672872.1 |
CDS | 40..852 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005672815.2 |
1 | ATGGCGGGCT TGGAGGTCCT GTTCGCGTCT GCGGCGCCGA CCATCACCTG CGCGCAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |