| Gene Symbol | GBP1 |
| Entrez Gene ID | 100151938 |
| Full Name | guanylate binding protein 1, interferon-inducible |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » GBP1 cDNA ORF clone
| Gene Symbol | GBP1 |
| Entrez Gene ID | 100151938 |
| Full Name | guanylate binding protein 1, interferon-inducible |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_021088503.1 | XP_020944162.1 | interferon-induced guanylate-binding protein 1 isoform X1 |
| XM_021088504.1 | XP_020944163.1 | interferon-induced guanylate-binding protein 1 isoform X1 |
| NM_001128473.1 | NP_001121945.1 | interferon-induced guanylate-binding protein 1 |
Effect of polymorphisms in the GBP1, Mx1 and CD163 genes on host responses to PRRSV infection in pigs.
Niu P, Shabir N, Khatun A, Seo BJ, Gu S, Lee SM, Lim SK, Kim KS, Kim WI
Veterinary microbiology182187-95(2016 Jan)
Expression profiling of the GBP1 gene as a candidate gene for porcine reproductive and respiratory syndrome resistance.
Gol S, Estany J, Fraile LJ, Pena RN
Animal genetics46(6)599-606(2015 Dec)
Molecular characterization of the porcine GBP1 and GBP2 genes.
Ma G, Huang J, Sun N, Liu X, Zhu M, Wu Z, Zhao S
Molecular immunology45(10)2797-807(2008 May)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
GBP1 is associated with resistance against porcine reproductive and respiratory syndrome infection and efficient T cell activation in pigs.
Title: Effect of polymorphisms in the GBP1, Mx1 and CD163 genes on host responses to PRRSV infection in pigs.
Allele A in GBP1, the unfavourable allele, is associated with higher PRRSV viremia levels and lower weight gain following infection
Title: Expression profiling of the GBP1 gene as a candidate gene for porcine reproductive and respiratory syndrome resistance.
cDNA sequences were cloned and the genomic structure of porcine GBP1 (poGBP1) and GBP2 (poGBP2), was analyzed.
Title: Molecular characterization of the porcine GBP1 and GBP2 genes.
The following GBP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GBP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe30044 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001128473.1 | |
| Accession Version | NM_001128473.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-30 | |
| Organism | Sus scrofa(pig) | |
| Product | interferon-induced guanylate-binding protein 1 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU259887.1. On Mar 29, 2010 this sequence version replaced XM_001929274.1. ##Evidence-Data-START## Transcript exon combination :: EU259887.1, AK239047.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2041072, SAMEA3179996 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCCTCAA AGGTGCACAT GCCCGAACCA CAGTGCCTCA TTGAGAACAT CAATGGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001121945.1 |
| CDS | 170..1942 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001128473.1 |
1 | ATGGCCTCAA AGGTGCACAT GCCCGAACCA CAGTGCCTCA TTGAGAACAT CAATGGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe247145 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021088503.1 , XM_021088504.1 | |
| Accession Version | XM_021088503.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1788bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | interferon-induced guanylate-binding protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAGACCCG GGGACATGGC CTCAAAGGTG CACATGCCCG AACCACAGTG CCTCATTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020944162.1 |
| CDS | 187..1974 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021088503.1 |
1 | ATGAGACCCG GGGACATGGC CTCAAAGGTG CACATGCCCG AACCACAGTG CCTCATTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe247145 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021088503.1 , XM_021088504.1 | |
| Accession Version | XM_021088504.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1788bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | interferon-induced guanylate-binding protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAGACCCG GGGACATGGC CTCAAAGGTG CACATGCCCG AACCACAGTG CCTCATTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020944163.1 |
| CDS | 174..1961 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021088504.1 |
1 | ATGAGACCCG GGGACATGGC CTCAAAGGTG CACATGCCCG AACCACAGTG CCTCATTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Effect of polymorphisms in the GBP1, Mx1 and CD163 genes on host responses to PRRSV infection in pigs. |
Expression profiling of the GBP1 gene as a candidate gene for porcine reproductive and respiratory syndrome resistance. |
Molecular characterization of the porcine GBP1 and GBP2 genes. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |