Gene Symbol | SLA-2 |
Entrez Gene ID | 100135031 |
Full Name | MHC class I antigen 2 |
Synonyms | SLA-1,SLA-14,SLA-B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » SLA-2 cDNA ORF clone
Gene Symbol | SLA-2 |
Entrez Gene ID | 100135031 |
Full Name | MHC class I antigen 2 |
Synonyms | SLA-1,SLA-14,SLA-B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021097876.1 | XP_020953535.1 | MHC class I antigen 2 isoform X4 |
XM_021097877.1 | XP_020953536.1 | MHC class I antigen 2 isoform X5 |
XM_021097872.1 | XP_020953531.1 | MHC class I antigen 2 isoform X1 |
NM_001113702.1 | NP_001107174.1 | MHC class I antigen 2 precursor |
XM_021097874.1 | XP_020953533.1 | MHC class I antigen 2 isoform X2 |
XM_021097875.1 | XP_020953534.1 | MHC class I antigen 2 isoform X3 |
Characterization of swine leukocyte antigen alleles and haplotypes on a novel miniature pig line, Microminipig.
Ando A, Imaeda N, Ohshima S, Miyamoto A, Kaneko N, Takasu M, Shiina T, Kulski JK, Inoko H, Kitagawa H
Animal genetics45(6)791-8(2014 Dec)
Characterization of swine leukocyte antigen (SLA) polymorphism by sequence-based and PCR-SSP methods in Chinese Bama miniature pigs.
Gao C, Jiang Q, Guo D, Liu J, Han L, Qu L
Developmental and comparative immunology45(1)87-96(2014 Jul)
Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine.
Ho CS, Martens GW, Amoss MS Jr, Gomez-Raya L, Beattie CW, Smith DM
Developmental and comparative immunology34(3)250-7(2010 Mar)
Sequence-based characterization of swine leucocyte antigen alleles in commercially available porcine cell lines.
Ho CS, Franzo-Romain MH, Lee YJ, Lee JH, Smith DM
International journal of immunogenetics36(4)231-4(2009 Aug)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
we identified a total of 29 alleles at five polymorphic SLA loci (SLA-1, SLA-3, SLA-2, DRB1 and DQB1 and followed the SLA types in a series of SinclairxHanford swine crosses
Title: Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine.
The following SLA-2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SLA-2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe01284 | |
Clone ID Related Accession (Same CDS sequence) | NM_001113702.1 | |
Accession Version | NM_001113702.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1095bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-16 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB231907.1. ##Evidence-Data-START## Transcript exon combination :: AB231907.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107174.1 |
CDS | 3..1097 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001113702.1 |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222261 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097872.1 | |
Accession Version | XM_021097872.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953531.1 |
CDS | 16..1317 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097872.1 |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222262 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097874.1 | |
Accession Version | XM_021097874.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1269bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953533.1 |
CDS | 16..1284 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097874.1 |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222263 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097875.1 | |
Accession Version | XM_021097875.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953534.1 |
CDS | 86..1147 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097875.1 |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222264 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097876.1 | |
Accession Version | XM_021097876.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953535.1 |
CDS | 16..1041 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097876.1 |
1 | ATGTTGGAGT CCCCGTGTCC CCAGTTTCAC TTCGCCATCT CCCAACCTGT GTGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222265 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097877.1 | |
Accession Version | XM_021097877.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 819bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 2 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953536.1 |
CDS | 86..904 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097877.1 |
1 | ATGCGGGTCA GGGGCCCTCA AGCCATCCTC ATTCTGCTGT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Characterization of swine leukocyte antigen alleles and haplotypes on a novel miniature pig line, Microminipig. |
Characterization of swine leukocyte antigen (SLA) polymorphism by sequence-based and PCR-SSP methods in Chinese Bama miniature pigs. |
Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine. |
Sequence-based characterization of swine leucocyte antigen alleles in commercially available porcine cell lines. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |