Gene Symbol | SLA-3 |
Entrez Gene ID | 100037288 |
Full Name | MHC class I antigen 3 |
Synonyms | SLA-1,SLA-7 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » SLA-3 cDNA ORF clone
Gene Symbol | SLA-3 |
Entrez Gene ID | 100037288 |
Full Name | MHC class I antigen 3 |
Synonyms | SLA-1,SLA-7 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021097850.1 | XP_020953509.1 | MHC class I antigen 3 isoform X2 |
NM_001097427.1 | NP_001090896.1 | MHC class I antigen 3 precursor |
XM_021097849.1 | XP_020953508.1 | MHC class I antigen 3 isoform X1 |
Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine.
Ho CS, Martens GW, Amoss MS Jr, Gomez-Raya L, Beattie CW, Smith DM
Developmental and comparative immunology34(3)250-7(2010 Mar)
Sequence-based characterization of swine leucocyte antigen alleles in commercially available porcine cell lines.
Ho CS, Franzo-Romain MH, Lee YJ, Lee JH, Smith DM
International journal of immunogenetics36(4)231-4(2009 Aug)
Sequence-based characterization of the eight SLA loci in Korean native pigs.
Lee YJ, Cho KH, Kim MJ, Smith DM, Ho CS, Jung KC, Jin DI, Park CS, Jeon JT, Lee JH
International journal of immunogenetics35(4-5)333-4(2008 Aug)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Characterization of swine leukocyte antigen polymorphism by sequence-based and PCR-SSP methods in Meishan pigs.
Ho CS, Rochelle ES, Martens GW, Schook LB, Smith DM
Immunogenetics58(11)873-82(2006 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
we identified a total of 29 alleles at five polymorphic SLA loci (SLA-1, SLA-3, SLA-2, DRB1 and DQB1 and followed the SLA types in a series of SinclairxHanford swine crosses
Title: Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine.
The following SLA-3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SLA-3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29284 | |
Clone ID Related Accession (Same CDS sequence) | NM_001097427.1 | |
Accession Version | NM_001097427.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-23 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 3 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF464010.1. ##Evidence-Data-START## Transcript exon combination :: AF464010.1, AF464009.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01048242, SAMN01048299 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001090896.1 |
CDS | 84..1169 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001097427.1 |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222251 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097849.1 | |
Accession Version | XM_021097849.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953508.1 |
CDS | 109..1230 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097849.1 |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222252 | |
Clone ID Related Accession (Same CDS sequence) | XM_021097850.1 | |
Accession Version | XM_021097850.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1053bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | MHC class I antigen 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953509.1 |
CDS | 109..1161 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021097850.1 |
1 | ATGGGGCCCC GAGCCCTCTT CTTGCTGCTG TCGGGGACCC TGGCCCTGAC TGGTACCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Swine leukocyte antigen (SLA) diversity in Sinclair and Hanford swine. |
Sequence-based characterization of swine leucocyte antigen alleles in commercially available porcine cell lines. |
Sequence-based characterization of the eight SLA loci in Korean native pigs. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
Characterization of swine leukocyte antigen polymorphism by sequence-based and PCR-SSP methods in Meishan pigs. |