Gene Symbol | CHD1 |
Entrez Gene ID | 856911 |
Full Name | chromatin-remodeling ATPase CHD1 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » CHD1 cDNA ORF clone
Gene Symbol | CHD1 |
Entrez Gene ID | 856911 |
Full Name | chromatin-remodeling ATPase CHD1 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001179054.1 | NP_011091.1 | chromatin-remodeling ATPase CHD1 |
Pan troglodytes (chimpanzee) | CHD1 | XP_517850.2 |
CHD1 | XP_001097125.1 | |
Mus musculus (house mouse) | Chd1 | NP_031716.2 |
Eremothecium gossypii | AGOS_AGR123C | NP_986789.1 |
Rattus norvegicus (Norway rat) | Chd1 | NP_001100935.1 |
Danio rerio (zebrafish) | zgc:173506 | NP_001121770.2 |
Saccharomyces cerevisiae (baker's yeast) | CHD1 | NP_011091.1 |
Schizosaccharomyces pombe (fission yeast) | hrp3 | NP_594967.1 |
Homo sapiens (human) | CHD1 | NP_001261.2 |
Canis lupus familiaris (dog) | CHD1 | XP_848459.1 |
Gallus gallus (chicken) | CHD1 | NP_990272.1 |
Kluyveromyces lactis | KLLA0C17578g | XP_452985.1 |
Schizosaccharomyces pombe (fission yeast) | hrp1 | NP_593660.1 |
Bos taurus (cattle) | CHD1 | NP_001178977.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome V.
Dietrich FS, Mulligan J, Hennessy K, Yelton MA, Allen E, Araujo R, Aviles E, Berno A, Brennan T, Carpenter J, Chen E, Cherry JM, Chung E, Duncan M, Guzman E, Hartzell G, Hunicke-Smith S, Hyman RW, Kayser A, Komp C, Lashkari D, Lew H, Lin D, Mosedale D, Davis RW
Nature387(6632 Suppl)78-81(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
It has been shown that the monomeric Chd1 remodeler shifts DNA back and forth by dynamically alternating between different segments of the nucleosome.
Title: The Chd1 Chromatin Remodeler Shifts Nucleosomal DNA Bidirectionally as a Monomer.
Intron retention was significantly lower in the absence of CHD1, suggesting that CHD1 function as a chromatin remodeler could indirectly affect RNA splicing.
Title: The ATP-dependent chromatin remodeler Chd1 is recruited by transcription elongation factors and maintains H3K4me3/H3K36me3 domains at actively transcribed and spliced genes.
Kinetic and equilibrium experiments show that poly(dA:dT) tracts perturb remodeling reactions if within one and a half helical turns of superhelix location 2 (SHL2), where the Chd1 ATPase engages nucleosomal DNA.
Title: The Sequence of Nucleosomal DNA Modulates Sliding by the Chd1 Chromatin Remodeler.
The orientation of the DNA-binding domain is mediated by sequences in the N-terminus and mutations to this part of the protein have positive and negative effects on Chd1 activity.
Title: Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes.
Chd1 takes part in chromatin reorganization surrounding transcribing RNA polymerase II (Pol II) in asymmetric nucleosomes; ubiquitin-conjugated histone H2B stimulates nucleosome sliding by Chd1.
Title: The Chd1 chromatin remodeler shifts hexasomes unidirectionally.
The following CHD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CHD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi05659 | |
Clone ID Related Accession (Same CDS sequence) | NM_001179054.1 | |
Accession Version | NM_001179054.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | chromatin-remodeling ATPase CHD1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001137). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGGCAGCCA AGGATATTTC TACTGAAGTG CTGCAAAATC CTGAACTATA TGGGCTGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_011091.1 |
CDS | 1..4407 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001179054.1 |
1 | ATGGCAGCCA AGGATATTTC TACTGAAGTG CTGCAAAATC CTGAACTATA TGGGCTGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome V. |
Life with 6000 genes. |