Gene Symbol | VPS21 |
Entrez Gene ID | 854256 |
Full Name | Rab family GTPase VPS21 |
Synonyms | VPS12,VPT12,YPT21,YPT51 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » VPS21 cDNA ORF clone
Gene Symbol | VPS21 |
Entrez Gene ID | 854256 |
Full Name | Rab family GTPase VPS21 |
Synonyms | VPS12,VPT12,YPT21,YPT51 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001183508.1 | NP_014732.1 | Rab family GTPase VPS21 |
LOC708347 | XP_001096821.2 | |
Bos taurus (cattle) | RAB5B | NP_001193120.1 |
Rattus norvegicus (Norway rat) | Rab5b | NP_001073405.1 |
Homo sapiens (human) | RAB5B | NP_001238965.1 |
Neurospora crassa | NCU06410 | XP_955952.1 |
Xenopus tropicalis (tropical clawed frog) | rab5b | NP_001005723.1 |
Gallus gallus (chicken) | RAB5B | NP_001186777.1 |
Saccharomyces cerevisiae (baker's yeast) | VPS21 | NP_014732.1 |
Mus musculus (house mouse) | Rab5b | NP_803130.1 |
Kluyveromyces lactis | KLLA0C13728g | XP_452813.1 |
Eremothecium gossypii | AGOS_ACL084C | NP_983320.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06241 | XP_003717353.1 |
Pan troglodytes (chimpanzee) | RAB5B | XP_003313654.1 |
Canis lupus familiaris (dog) | RAB5B | XP_531627.2 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonn? R, Boyer J, Camasses A, Casamayor A, Casas C, Ch?ret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K
Nature387(6632 Suppl)98-102(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data indicate that efficient Vps21 recycling requires both Ypt7 and endosome-vacuole fusion, thus suggesting extended control of a GAP cascade beyond Rab interactions.
Title: Identification of a Rab GTPase-activating protein cascade that controls recycling of the Rab5 GTPase Vps21 from the vacuole.
Finally, three sequential steps of this pathway are delineated: Atg9-dependent exit from the ER en route to autophagy, Ypt1- and core Atgs-mediated pre-autophagsomal-structure organization, and Ypt51-mediated delivery of APs to the vacuole
Title: A Role for Macro-ER-Phagy in ER Quality Control.
The endocytic traffic branches into two routes to reach the vacuole: a Rab5-dependent vacuolar protein sorting pathway and a Rab5-independent AP-3-mediated pathway.
Title: Bifurcation of the endocytic pathway into Rab5-dependent and -independent transport to the vacuole.
Data indicate that Cells lacking both Vps9 and Muk1 closely phenocopy double and triple knock-out strains lacking Rab5 paralogs.
Title: Vps9 family protein Muk1 is the second Rab5 guanosine nucleotide exchange factor in budding yeast.
CORVET (class C core vacuole/endosome tethering) binds to SNAREs and Rab5/Vps21-GTP and can specifically tether Vps21-positive membranes.
Title: The CORVET complex promotes tethering and fusion of Rab5/Vps21-positive membranes.
The following VPS21 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS21 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi03394 | |
Clone ID Related Accession (Same CDS sequence) | NM_001183508.1 | |
Accession Version | NM_001183508.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 633bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | Rab family GTPase VPS21 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001147). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGAACACAT CAGTCACTTC CATAAAGTTG GTACTGTTGG GTGAGGCAGC AGTTGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_014732.1 |
CDS | 1..633 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001183508.1 |
1 | ATGAACACAT CAGTCACTTC CATAAAGTTG GTACTGTTGG GTGAGGCAGC AGTTGGTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. |
Life with 6000 genes. |