Ttc39d cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ttc39d
Entrez Gene ID	366531
Full Name	tetratricopeptide repeat domain 39D
Synonyms	RGD1311615
General protein information	Preferred Names tetratricopeptide repeat domain 39D Names tetratricopeptide repeat domain 39D
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 6 Map Location: 6q11

mRNA and Protein(s)

mRNA	Protein	Name
NM_001191906.1	NP_001178835.1	tetratricopeptide repeat domain 39D

Pathways from BioSystems

Homologies

	LOC713452	XP_001102811.2
Canis lupus familiaris (dog)	LOC100685565	XP_005630426.1
Mus musculus (house mouse)	Ttc39d	NP_080627.2
Rattus norvegicus (Norway rat)	Ttc39d	NP_001178835.1

Gene Ontology

The following Ttc39d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ttc39d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa07996	NM_001191906.1 Latest version!	Rattus norvegicus tetratricopeptide repeat domain 39D (Ttc39d), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ttc39d ( NM_001191906.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001178835.1 Rattus norvegicus tetratricopeptide repeat domain 39D (Ttc39d), mRNA.

Price & Availability↑

CloneID	ORa07996
Clone ID Related Accession (Same CDS sequence)	NM_001191906.1
Accession Version	NM_001191906.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-30
Organism	Rattus norvegicus(Norway rat)
Product	tetratricopeptide repeat domain 39D
Comment	Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from AABR07062677.1. On Jul 17, 2010 this sequence version replaced XM_345624.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CK470851.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMEA2689595 [ECO:0000348] ##Evidence-Data-END##

ATGTCACGGT ACCAAAGACA TGAGGACAAT GACGAGTACC TGTTAAATAC CCTTAGTCTG 
AGTGAAGGCG AAACTGAAAG AATGGCAAGA GTAACTAGAT CAGTCAATCT CAGGGACAGT 
GAAACAGAGG ACAAGTTTGA GGATGCCCAT GAAATTATCC CTGTGGCAAC AACAATGAGC 
CTCTTGTCCT CCTTGGAAGA ATGCACAACT GGATTGTATT TGTTTCTAAA TAACAGATTC 
TCAGACGCCA TCAATCTTAT TCACCCATGG TCAAAAAACA GTTCCTATCA TGCCCTAATA 
TACAGTATGT TTATGGTTGT CAAGGCCATC CTCACTTTTG AGCCACAGGA TATCCAGATC 
GGAATGAATG CTGCAAAGGA AGCTCTGAAA ACCTGCAACA ATTTCCGGAA AAAACCCAGG 
ATAATGACTT TATCTCGCCT AGTGAGTAGG CAGGGAATAA AGTCTATCAA AGAGGAGGAG 
TTACACGCAG AAGTATGCTA TGCCGAGTGT CTAGTCTTGA AGTCTGCCAT AACGTTTATA 
CAGGACGACA GTTTGCTGAA CTTCCTTAAA AGCGGTGTCA ATGTTGGGTC AAGCTATCAA 
ATATACAAAG ACTGCCAGCA GGTCTTAGAA CTTATGCCGG AGAACCAAAG TAAAACCCAC 
AGACACCTAA ATGGAGGGAT AAAATTTGGA GTTGGAGTAT TCAATCTGAT GTTTTCACTT 
GTTCCACCAA AATCACTTAA ACTTCTCAAT ATGGTTGGCT ATTCTGGAGA CAGAGAAGTG 
GGGCTGGCTT TGCTTCACGA CAGTGCATCG GAACCCCATA TAAATAACAT CTTAAGTGTG 
TTCACTCTTC TCTTTTATTA CAACTACGTG CGTGTAGTTG TTGGTGTTGA AAAGGCTTCT 
ACTGCTGCTA CAGAGAGTCT CTTCCTGGTC TACCTGGAGA AATTCCCCAA CTGTGTTGTA 
CTTAAATTTT TTCGTGCACG TTTTAACATG CTAAATGGAA ATTTTGAAAG TGCAAAGTTA 
AAGTTACAAG AGTGCATTAT TACTCAGAAT GAATGGAAGC AGGTTCATCA CCTCTGTTAC 
TGGGAACTCA TGTGGTGCCA TATTTTTTTG CAGAATTGGA AGCAGGCATA CAACTATGCC 
AATCTATTGT TTCAACACAG CAGGTGGTCT AAGGCGATCT ATACATACAG CAAAGCCATA 
ATACTGGCCT TGCTTCCTCC TGATTCCGTG GACTCAGAAA ACGAGAGCTT GAGCTCCTAC 
TTCTTACGTG TGGATAGCCT GAGAATCAAA TTTTTAGGCT CTTCTGTGCC GATAGAAAAG 
TTTATTGCTG AGAAGAGTCA GCGCTATGGT ACTACAACGG GCTGGTTTAC AGCACAGCCC 
CTTCTGGAAT TCATCTACGC CTGGAGTGGG TTCCGAGTCA TGAGCAAGAA AATAGAGCTT 
ATTTCAAGTT GGCTAATGAT AATTGACAAA GGAAAAGAGC TTTTGAATGA GAATCCAAAT 
GAGGAGTATG GTGTGGACGA CATGAGCTTG CTAAATTTGC TGAAAGGCCT GTGCCTGAAG 
CACCTGGGCA AACACCTGAA GGCTGAACAC TACTTCATCC GTGTGATCAG GAAGGAAAGG 
TCATTAAAGT ACGACCACTA TCTGGTGCCC TATAGCTACT ATGAACTGGG AATGCTACAC 
TATCTGAAAG GAGACTATAC TAATGCAACC AAAAACCTCG ACAACATAAA GAACTATAAG 
GACTATTCCA TGGAGGCCCG GCTACAGTTT AGGGCTCATA TTGCCCTTGA ACAGATAGCT 
AAATTAGAAA AGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001178835.1
CDS	290..2104
Translation	MSRYQRHEDNDEYLLNTLSLSEGETERMARVTRSVNLRDSETEDKFEDAHEIIPVATTMSLLSSLEECTTGLYLFLNNRFSDAINLIHPWSKNSSYHALIYSMFMVVKAILTFEPQDIQIGMNAAKEALKTCNNFRKKPRIMTLSRLVSRQGIKSIKEEELHAEVCYAECLVLKSAITFIQDDSLLNFLKSGVNVGSSYQIYKDCQQVLELMPENQSKTHRHLNGGIKFGVGVFNLMFSLVPPKSLKLLNMVGYSGDREVGLALLHDSASEPHINNILSVFTLLFYYNYVRVVVGVEKASTAATESLFLVYLEKFPNCVVLKFFRARFNMLNGNFESAKLKLQECIITQNEWKQVHHLCYWELMWCHIFLQNWKQAYNYANLLFQHSRWSKAIYTYSKAIILALLPPDSVDSENESLSSYFLRVDSLRIKFLGSSVPIEKFIAEKSQRYGTTTGWFTAQPLLEFIYAWSGFRVMSKKIELISSWLMIIDKGKELLNENPNEEYGVDDMSLLNLLKGLCLKHLGKHLKAEHYFIRVIRKERSLKYDHYLVPYSYYELGMLHYLKGDYTNATKNLDNIKNYKDYSMEARLQFRAHIALEQIAKLEK

Target ORF information:

RefSeq Version	NM_001191906.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tetratricopeptide repeat domain 39D (Ttc39d), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001191906.1

ORF Insert Sequence:

ATGTCACGGT ACCAAAGACA TGAGGACAAT GACGAGTACC TGTTAAATAC CCTTAGTCTG 
AGTGAAGGCG AAACTGAAAG AATGGCAAGA GTAACTAGAT CAGTCAATCT CAGGGACAGT 
GAAACAGAGG ACAAGTTTGA GGATGCCCAT GAAATTATCC CTGTGGCAAC AACAATGAGC 
CTCTTGTCCT CCTTGGAAGA ATGCACAACT GGATTGTATT TGTTTCTAAA TAACAGATTC 
TCAGACGCCA TCAATCTTAT TCACCCATGG TCAAAAAACA GTTCCTATCA TGCCCTAATA 
TACAGTATGT TTATGGTTGT CAAGGCCATC CTCACTTTTG AGCCACAGGA TATCCAGATC 
GGAATGAATG CTGCAAAGGA AGCTCTGAAA ACCTGCAACA ATTTCCGGAA AAAACCCAGG 
ATAATGACTT TATCTCGCCT AGTGAGTAGG CAGGGAATAA AGTCTATCAA AGAGGAGGAG 
TTACACGCAG AAGTATGCTA TGCCGAGTGT CTAGTCTTGA AGTCTGCCAT AACGTTTATA 
CAGGACGACA GTTTGCTGAA CTTCCTTAAA AGCGGTGTCA ATGTTGGGTC AAGCTATCAA 
ATATACAAAG ACTGCCAGCA GGTCTTAGAA CTTATGCCGG AGAACCAAAG TAAAACCCAC 
AGACACCTAA ATGGAGGGAT AAAATTTGGA GTTGGAGTAT TCAATCTGAT GTTTTCACTT 
GTTCCACCAA AATCACTTAA ACTTCTCAAT ATGGTTGGCT ATTCTGGAGA CAGAGAAGTG 
GGGCTGGCTT TGCTTCACGA CAGTGCATCG GAACCCCATA TAAATAACAT CTTAAGTGTG 
TTCACTCTTC TCTTTTATTA CAACTACGTG CGTGTAGTTG TTGGTGTTGA AAAGGCTTCT 
ACTGCTGCTA CAGAGAGTCT CTTCCTGGTC TACCTGGAGA AATTCCCCAA CTGTGTTGTA 
CTTAAATTTT TTCGTGCACG TTTTAACATG CTAAATGGAA ATTTTGAAAG TGCAAAGTTA 
AAGTTACAAG AGTGCATTAT TACTCAGAAT GAATGGAAGC AGGTTCATCA CCTCTGTTAC 
TGGGAACTCA TGTGGTGCCA TATTTTTTTG CAGAATTGGA AGCAGGCATA CAACTATGCC 
AATCTATTGT TTCAACACAG CAGGTGGTCT AAGGCGATCT ATACATACAG CAAAGCCATA 
ATACTGGCCT TGCTTCCTCC TGATTCCGTG GACTCAGAAA ACGAGAGCTT GAGCTCCTAC 
TTCTTACGTG TGGATAGCCT GAGAATCAAA TTTTTAGGCT CTTCTGTGCC GATAGAAAAG 
TTTATTGCTG AGAAGAGTCA GCGCTATGGT ACTACAACGG GCTGGTTTAC AGCACAGCCC 
CTTCTGGAAT TCATCTACGC CTGGAGTGGG TTCCGAGTCA TGAGCAAGAA AATAGAGCTT 
ATTTCAAGTT GGCTAATGAT AATTGACAAA GGAAAAGAGC TTTTGAATGA GAATCCAAAT 
GAGGAGTATG GTGTGGACGA CATGAGCTTG CTAAATTTGC TGAAAGGCCT GTGCCTGAAG 
CACCTGGGCA AACACCTGAA GGCTGAACAC TACTTCATCC GTGTGATCAG GAAGGAAAGG 
TCATTAAAGT ACGACCACTA TCTGGTGCCC TATAGCTACT ATGAACTGGG AATGCTACAC 
TATCTGAAAG GAGACTATAC TAATGCAACC AAAAACCTCG ACAACATAAA GAACTATAAG 
GACTATTCCA TGGAGGCCCG GCTACAGTTT AGGGCTCATA TTGCCCTTGA ACAGATAGCT 
AAATTAGAAA AGTGA