Cideb cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cideb
Entrez Gene ID	364388
Full Name	cell death-inducing DFFA-like effector b
General protein information	Preferred Names cell death-inducing DFFA-like effector b Names cell death activator CIDE-B cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 15 Map Location: 15p13

mRNA and Protein(s)

mRNA	Protein	Name
XM_006252002.2	XP_006252064.1	cell death activator CIDE-B isoform X1
NM_001108869.1	NP_001102339.1	cell death activator CIDE-B

Pathways from BioSystems

Homologies

Homo sapiens (human)	CIDEB	NP_055245.2
Pan troglodytes (chimpanzee)	CIDEB	XP_003314324.1
Mus musculus (house mouse)	Cideb	NP_034024.2
Xenopus tropicalis (tropical clawed frog)	cideb	NP_001011434.1
	CIDEB	XP_002805043.1
Rattus norvegicus (Norway rat)	Cideb	NP_001102339.1
Bos taurus (cattle)	CIDEB	NP_001029739.1
Danio rerio (zebrafish)	cideb	NP_001243186.1

Gene Ontology
Bibliography

Related articles in PubMed

CideB protein is required for the biogenesis of very low density lipoprotein (VLDL) transport vesicle.
Tiwari S, Siddiqi S, Siddiqi SA
The Journal of biological chemistry288(7)5157-65(2013 Feb)

The hepatitis C virus NS2 protein is an inhibitor of CIDE-B-induced apoptosis.
Erdtmann L, Franck N, Lerat H, Le Seyec J, Gilot D, Cannie I, Gripon P, Hibner U, Guguen-Guillouzo C
The Journal of biological chemistry278(20)18256-64(2003 May)

Molecular cloning and characterization of CIDE-3, a novel member of the cell-death-inducing DNA-fragmentation-factor (DFF45)-like effector family.
Liang L, Zhao M, Xu Z, Yokoyama KK, Li T
The Biochemical journal370(Pt 1)195-203(2003 Feb)

CIDE, a novel family of cell death activators with homology to the 45 kDa subunit of the DNA fragmentation factor.
Inohara N, Koseki T, Chen S, Wu X, N??ez G
The EMBO journal17(9)2526-33(1998 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

CideB protein is required for the biogenesis of very low density lipoprotein (VLDL) transport vesicle
Title: CideB protein is required for the biogenesis of very low density lipoprotein (VLDL) transport vesicle.

The following Cideb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cideb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa00400	NM_001108869.1 Latest version!	Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa36696	XM_006252002.2 Latest version!	Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cideb ( NM_001108869.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102339.1 Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), mRNA.

Price & Availability↑

CloneID	ORa00400
Clone ID Related Accession (Same CDS sequence)	NM_001108869.1
Accession Version	NM_001108869.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 747bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	cell death activator CIDE-B
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474049.1. On or before Oct 4, 2007 this sequence version replaced XM_001056289.1, XM_344410.3. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN01906351, SAMN01906353 [ECO:0000350] ##Evidence-Data-END##

ATGCTTGACT CATCTCTCAC TTTACCAGAG CTAAGATCTC AGCTCTATAC AAAAACACAA 
GACTTCAGCC TCCACACAAC AGAAGTGCCC AGCCCCGAAG CAATAGGGGG GCGACTCGCC 
GTCTCTCACC CAGCCATGGA ATACCTTTCA GCCTTGAGCT CCAATGGCCT GCTAAGGTCA 
GTGTCTACTA TGAGCTCCGA GCTTAGCCGT AGGGTCTGGA ACTCGGCTCC TCCACCTCAG 
CGACCCTTCC GTGTCTGTGA TCATAAGCGG ACAGTCCGGA AAGGACTAAC AGCCGCCACC 
CGCCAGGAAC TGCTAGATAA GGAGGATGGG ACTGCGGTGG AGACTGAAGA CTTCTTCGAG 
CTGCTAGAGG ATGACACATG CTTGATGGCT CTAGAGCAGG GACAGAGCTG GAGCCCAAAG 
AGTGGGATGT TGTCATACGG CCTAGGACGG GAGAAGCCAA AACATAGCAA GGACATCGCC 
CGCATCACCT TTGATGTGTA TAAGCAAAAT CCTCGAGACC TCTTCGGCAG CCTCAACGTG 
AAAGCTACAT TCTACGGGCT CTACTCCATG AGCTGCGATT TTCAAGGAGT TGGCCCTAAA 
AAAGTACTCA GGGAGCTCCT TCGTTGGACT TCCTCACTGC TGCAAGGCCT GGGCCATATG 
CTGCTGGGAA TCTCATCTAC TCTGCGCCAT GTGGTGGAGG GGGCTGAGCG ATGGCAGTGG 
CACCGGCAGA GTCACCTCCA TTCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102339.1
CDS	42..788
Translation	MLDSSLTLPELRSQLYTKTQDFSLHTTEVPSPEAIGGRLAVSHPAMEYLSALSSNGLLRSVSTMSSELSRRVWNSAPPPQRPFRVCDHKRTVRKGLTAATRQELLDKEDGTAVETEDFFELLEDDTCLMALEQGQSWSPKSGMLSYGLGREKPKHSKDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHRQSHLHS

Target ORF information:

RefSeq Version	NM_001108869.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001108869.1

ORF Insert Sequence:

ATGCTTGACT CATCTCTCAC TTTACCAGAG CTAAGATCTC AGCTCTATAC AAAAACACAA 
GACTTCAGCC TCCACACAAC AGAAGTGCCC AGCCCCGAAG CAATAGGGGG GCGACTCGCC 
GTCTCTCACC CAGCCATGGA ATACCTTTCA GCCTTGAGCT CCAATGGCCT GCTAAGGTCA 
GTGTCTACTA TGAGCTCCGA GCTTAGCCGT AGGGTCTGGA ACTCGGCTCC TCCACCTCAG 
CGACCCTTCC GTGTCTGTGA TCATAAGCGG ACAGTCCGGA AAGGACTAAC AGCCGCCACC 
CGCCAGGAAC TGCTAGATAA GGAGGATGGG ACTGCGGTGG AGACTGAAGA CTTCTTCGAG 
CTGCTAGAGG ATGACACATG CTTGATGGCT CTAGAGCAGG GACAGAGCTG GAGCCCAAAG 
AGTGGGATGT TGTCATACGG CCTAGGACGG GAGAAGCCAA AACATAGCAA GGACATCGCC 
CGCATCACCT TTGATGTGTA TAAGCAAAAT CCTCGAGACC TCTTCGGCAG CCTCAACGTG 
AAAGCTACAT TCTACGGGCT CTACTCCATG AGCTGCGATT TTCAAGGAGT TGGCCCTAAA 
AAAGTACTCA GGGAGCTCCT TCGTTGGACT TCCTCACTGC TGCAAGGCCT GGGCCATATG 
CTGCTGGGAA TCTCATCTAC TCTGCGCCAT GTGGTGGAGG GGGCTGAGCG ATGGCAGTGG 
CACCGGCAGA GTCACCTCCA TTCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cideb ( XM_006252002.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006252064.1 Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa36696
Clone ID Related Accession (Same CDS sequence)	XM_006252002.2
Accession Version	XM_006252002.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 795bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	cell death activator CIDE-B isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006252002.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTTGACT CATCTCTCAC TTTACCAGAG CTAAGATCTC AGCTCTATAC AAAAACACAA 
GACTTCAGCC TCCACACAAC AGAAGTGCCC AGCCCCGAAG CAATAGGGGG GCGACTCGCC 
GTCTCTCACC CAGCCATGGA ATACCTTTCA GCCTTGAGCT CCAATGGCCT GCTAAGGTCA 
GTGTCTACTA TGAGCTCCGA GCTTAGCCGT AGGGTCTGGA ACTCGGCTCC TCCACCTCAG 
CGACCCTTCC GTGTCTGTGA TCATAAGCGG ACAGTCCGGA AAGGACTAAC AGCCGCCACC 
CGCCAGGAAC TGCTAGATAA GGTAGTGGAG ACCTTGCTGC TAAGCGGAGT GCTAACGCTG 
GTCCTGGAGG AGGATGGGAC TGCGGTGGAG ACTGAAGACT TCTTCGAGCT GCTAGAGGAT 
GACACATGCT TGATGGCTCT AGAGCAGGGA CAGAGCTGGA GCCCAAAGAG TGGGATGTTG 
TCATACGGCC TAGGACGGGA GAAGCCAAAA CATAGCAAGG ACATCGCCCG CATCACCTTT 
GATGTGTATA AGCAAAATCC TCGAGACCTC TTCGGCAGCC TCAACGTGAA AGCTACATTC 
TACGGGCTCT ACTCCATGAG CTGCGATTTT CAAGGAGTTG GCCCTAAAAA AGTACTCAGG 
GAGCTCCTTC GTTGGACTTC CTCACTGCTG CAAGGCCTGG GCCATATGCT GCTGGGAATC 
TCATCTACTC TGCGCCATGT GGTGGAGGGG GCTGAGCGAT GGCAGTGGCA CCGGCAGAGT 
CACCTCCATT CATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006252064.1
CDS	37..831
Translation	MLDSSLTLPELRSQLYTKTQDFSLHTTEVPSPEAIGGRLAVSHPAMEYLSALSSNGLLRSVSTMSSELSRRVWNSAPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVVETLLLSGVLTLVLEEDGTAVETEDFFELLEDDTCLMALEQGQSWSPKSGMLSYGLGREKPKHSKDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHRQSHLHS

Target ORF information:

RefSeq Version	XM_006252002.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus cell death-inducing DFFA-like effector b (Cideb), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006252002.2

ORF Insert Sequence:

ATGCTTGACT CATCTCTCAC TTTACCAGAG CTAAGATCTC AGCTCTATAC AAAAACACAA 
GACTTCAGCC TCCACACAAC AGAAGTGCCC AGCCCCGAAG CAATAGGGGG GCGACTCGCC 
GTCTCTCACC CAGCCATGGA ATACCTTTCA GCCTTGAGCT CCAATGGCCT GCTAAGGTCA 
GTGTCTACTA TGAGCTCCGA GCTTAGCCGT AGGGTCTGGA ACTCGGCTCC TCCACCTCAG 
CGACCCTTCC GTGTCTGTGA TCATAAGCGG ACAGTCCGGA AAGGACTAAC AGCCGCCACC 
CGCCAGGAAC TGCTAGATAA GGTAGTGGAG ACCTTGCTGC TAAGCGGAGT GCTAACGCTG 
GTCCTGGAGG AGGATGGGAC TGCGGTGGAG ACTGAAGACT TCTTCGAGCT GCTAGAGGAT 
GACACATGCT TGATGGCTCT AGAGCAGGGA CAGAGCTGGA GCCCAAAGAG TGGGATGTTG 
TCATACGGCC TAGGACGGGA GAAGCCAAAA CATAGCAAGG ACATCGCCCG CATCACCTTT 
GATGTGTATA AGCAAAATCC TCGAGACCTC TTCGGCAGCC TCAACGTGAA AGCTACATTC 
TACGGGCTCT ACTCCATGAG CTGCGATTTT CAAGGAGTTG GCCCTAAAAA AGTACTCAGG 
GAGCTCCTTC GTTGGACTTC CTCACTGCTG CAAGGCCTGG GCCATATGCT GCTGGGAATC 
TCATCTACTC TGCGCCATGT GGTGGAGGGG GCTGAGCGAT GGCAGTGGCA CCGGCAGAGT 
CACCTCCATT CATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

CideB protein is required for the biogenesis of very low density lipoprotein (VLDL) transport vesicle.
The Journal of biological chemistry288(7)5157-65(2013 Feb)
Tiwari S,Siddiqi S,Siddiqi SA

The hepatitis C virus NS2 protein is an inhibitor of CIDE-B-induced apoptosis.
The Journal of biological chemistry278(20)18256-64(2003 May)
Erdtmann L,Franck N,Lerat H,Le Seyec J,Gilot D,Cannie I,Gripon P,Hibner U,Guguen-Guillouzo C

Molecular cloning and characterization of CIDE-3, a novel member of the cell-death-inducing DNA-fragmentation-factor (DFF45)-like effector family.
The Biochemical journal370(Pt 1)195-203(2003 Feb)
Liang L,Zhao M,Xu Z,Yokoyama KK,Li T

CIDE, a novel family of cell death activators with homology to the 45 kDa subunit of the DNA fragmentation factor.
The EMBO journal17(9)2526-33(1998 May)
Inohara N,Koseki T,Chen S,Wu X,N??ez G