Faap20 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Faap20
Entrez Gene ID	362678
Full Name	Fanconi anemia core complex associated protein 20
Synonyms	RGD1308923
General protein information	Preferred Names Fanconi anemia core complex associated protein 20 Names Fanconi anemia core complex-associated protein 20 FANCA-associated protein of 20 kDa Fanconi anemia-associated protein of 20 kDa
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5q36

mRNA and Protein(s)

mRNA	Protein	Name
NM_001108698.1	NP_001102168.1	Fanconi anemia core complex-associated protein 20
XM_006239585.3	XP_006239647.1	Fanconi anemia core complex-associated protein 20 isoform X1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	C1H1orf86	XP_003949324.1
Homo sapiens (human)	C1orf86	NP_001269599.1
Rattus norvegicus (Norway rat)	RGD1308923	NP_001102168.1
Mus musculus (house mouse)	2610002J02Rik	NP_001177374.1

Gene Ontology
Bibliography

Related articles in PubMed

A ubiquitin-binding protein, FAAP20, links RNF8-mediated ubiquitination to the Fanconi anemia DNA repair network.
Yan Z, Guo R, Paramasivam M, Shen W, Ling C, Fox D 3rd, Wang Y, Oostra AB, Kuehl J, Lee DY, Takata M, Hoatlin ME, Schindler D, Joenje H, de Winter JP, Li L, Seidman MM, Wang W
Molecular cell47(1)61-75(2012 Jul)

FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein required for functional integrity of the FA-BRCA DNA repair pathway.
Ali AM, Pradhan A, Singh TR, Du C, Li J, Wahengbam K, Grassman E, Auerbach AD, Pang Q, Meetei AR
Blood119(14)3285-94(2012 Apr)

Fanconi anemia (FA) binding protein FAAP20 stabilizes FA complementation group A (FANCA) and participates in interstrand cross-link repair.
Leung JW, Wang Y, Fong KW, Huen MS, Li L, Chen J
Proceedings of the National Academy of Sciences of the United States of America109(12)4491-6(2012 Mar)

Regulation of Rev1 by the Fanconi anemia core complex.
Kim H, Yang K, Dejsuphong D, D'Andrea AD
Nature structural & molecular biology19(2)164-70(2012 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Faap20 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Faap20 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa29018	XM_006239585.3 Latest version!	Rattus norvegicus Fanconi anemia core complex associated protein 20 (Faap20), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa08159	NM_001108698.1 Latest version!	Rattus norvegicus FA core complex associated protein 20 (Faap20), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$69.30 $99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Faap20 ( XM_006239585.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006239647.1 Rattus norvegicus Fanconi anemia core complex associated protein 20 (Faap20), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa29018
Clone ID Related Accession (Same CDS sequence)	XM_006239585.3
Accession Version	XM_006239585.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 738bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	Fanconi anemia core complex-associated protein 20 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239585.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAGCCC AGGCTCCAGG GTCTGCACAG GGTCGGGTGG GTCCAATCTC GCACCCCTGC 
AAACTGGAGG TCAGCTCCAC GCTGTCGCGA CTCTCCCTCA AGGCGGCAGC CTCGTGTTCC 
CAACGGTTGG GATCTCGGCG CCTTAGATTT CCAGCGCCAC AAAAGGGAGC TGGCACTTGG 
CAGAGCGGAG AGCGGGGGCT CTGGAAGCCT CCGGAGCGGG TCCCGGTCGG AGGGCGGGTC 
TGGCTGCCCC CTAACTGCCG CCCCTGGTTT CTCTCGGAGG AAAGTAAGAG TGAGCCGTGG 
GCTGCTCTGC TGCGCAGCAC CGTGGGCGGG AACACGGATT GGACCCCGAA CAGTCAGCCA 
TTACCACCGC TGCCTGCTTT TCCCAGCCAG GAATCTCTGC CTGACCCAGA GTCCACTGTG 
CCTCCTGAGG TCTTCACTGT AGGATCCAAG ACTTTTTCCT GGACGCCTTT TCCGCCTGCC 
CTTCGTGGCT CTGGAAGCTC CTGCCGCCTG TTACGTTGTC CTGAAGGCTC TCCGGGGTCA 
CCTGCTCCAT CCCTGAAAGG ATGCCCTGCA CTGGATTCCC GTCAAACTCC CAGCACCCAG 
GAGTGTGTGC AGAGTCAACT TGTGTTGCTG AACTGCCCAT TGTGCCAGAA GGCATTTGAC 
CCGAAGCTGA CCCAGCTAGA TGTGGATAGC CACCTTGCTC AGTGCTTGGC TGAAAGCACA 
GAAGACGTGG TGTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006239647.1
CDS	697..1434
Translation	MGAQAPGSAQGRVGPISHPCKLEVSSTLSRLSLKAAASCSQRLGSRRLRFPAPQKGAGTWQSGERGLWKPPERVPVGGRVWLPPNCRPWFLSEESKSEPWAALLRSTVGGNTDWTPNSQPLPPLPAFPSQESLPDPESTVPPEVFTVGSKTFSWTPFPPALRGSGSSCRLLRCPEGSPGSPAPSLKGCPALDSRQTPSTQECVQSQLVLLNCPLCQKAFDPKLTQLDVDSHLAQCLAESTEDVVW

Target ORF information:

RefSeq Version	XM_006239585.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus Fanconi anemia core complex associated protein 20 (Faap20), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006239585.3

ORF Insert Sequence:

ATGGGAGCCC AGGCTCCAGG GTCTGCACAG GGTCGGGTGG GTCCAATCTC GCACCCCTGC 
AAACTGGAGG TCAGCTCCAC GCTGTCGCGA CTCTCCCTCA AGGCGGCAGC CTCGTGTTCC 
CAACGGTTGG GATCTCGGCG CCTTAGATTT CCAGCGCCAC AAAAGGGAGC TGGCACTTGG 
CAGAGCGGAG AGCGGGGGCT CTGGAAGCCT CCGGAGCGGG TCCCGGTCGG AGGGCGGGTC 
TGGCTGCCCC CTAACTGCCG CCCCTGGTTT CTCTCGGAGG AAAGTAAGAG TGAGCCGTGG 
GCTGCTCTGC TGCGCAGCAC CGTGGGCGGG AACACGGATT GGACCCCGAA CAGTCAGCCA 
TTACCACCGC TGCCTGCTTT TCCCAGCCAG GAATCTCTGC CTGACCCAGA GTCCACTGTG 
CCTCCTGAGG TCTTCACTGT AGGATCCAAG ACTTTTTCCT GGACGCCTTT TCCGCCTGCC 
CTTCGTGGCT CTGGAAGCTC CTGCCGCCTG TTACGTTGTC CTGAAGGCTC TCCGGGGTCA 
CCTGCTCCAT CCCTGAAAGG ATGCCCTGCA CTGGATTCCC GTCAAACTCC CAGCACCCAG 
GAGTGTGTGC AGAGTCAACT TGTGTTGCTG AACTGCCCAT TGTGCCAGAA GGCATTTGAC 
CCGAAGCTGA CCCAGCTAGA TGTGGATAGC CACCTTGCTC AGTGCTTGGC TGAAAGCACA 
GAAGACGTGG TGTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Faap20 ( NM_001108698.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102168.1 Rattus norvegicus FA core complex associated protein 20 (Faap20), mRNA.

Price & Availability↑

CloneID	ORa08159
Clone ID Related Accession (Same CDS sequence)	NM_001108698.1
Accession Version	NM_001108698.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-20
Organism	Rattus norvegicus(Norway rat)
Product	Fanconi anemia core complex-associated protein 20
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473968.1. On or before Oct 4, 2007 this sequence version replaced XM_342994.2, XM_001076736.1, XM_001076708.1. ##Evidence-Data-START## Transcript exon combination :: CB608866.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGAGGAGG AGCGGAGGCT GCGGGGGAGG CTGAGCCGCC GCAGGCCGCC CGCAGGGGGC 
GGGCCCCCTA ACTGCCGCCC CTGGTTTCTC TCGGAGGAAA GTAAGAGTGA GCCGTGGGCT 
GCTCTGCTGC GCAGCACCGT GGGCGGGAAC ACGGATTGGA CCCCGAACAG TCAGCCATTA 
CCACCGCTGC CTGCTTTTCC CAGCCAGGAA TCTCTGCCTG ACCCAGAGTC CACTGTGCCT 
CCTGAGGTCT TCACTGTAGG ATCCAAGACT TTTTCCTGGA CGCCTTTTCC GCCTGCCCTT 
CGTGGCTCTG GAAGCTCCTG CCGCCTGTTA CGTTGTCCTG AAGGCTCTCC GGGGTCACCT 
GCTCCATCCC TGAAAGGATG CCCTGCACTG GATTCCCGTC AAACTCCCAG CACCCAGGAG 
TGTGTGCAGA GTCAACTTGT GTTGCTGAAC TGCCCATTGT GCCAGAAGGC ATTTGACCCG 
AAGCTGACCC AGCTAGATGT GGATAGCCAC CTTGCTCAGT GCTTGGCTGA AAGCACAGAA 
GACGTGGTGT GGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102168.1
CDS	200..754
Translation	MEEERRLRGRLSRRRPPAGGGPPNCRPWFLSEESKSEPWAALLRSTVGGNTDWTPNSQPLPPLPAFPSQESLPDPESTVPPEVFTVGSKTFSWTPFPPALRGSGSSCRLLRCPEGSPGSPAPSLKGCPALDSRQTPSTQECVQSQLVLLNCPLCQKAFDPKLTQLDVDSHLAQCLAESTEDVVW

Target ORF information:

RefSeq Version	NM_001108698.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus FA core complex associated protein 20 (Faap20), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001108698.1

ORF Insert Sequence:

ATGGAGGAGG AGCGGAGGCT GCGGGGGAGG CTGAGCCGCC GCAGGCCGCC CGCAGGGGGC 
GGGCCCCCTA ACTGCCGCCC CTGGTTTCTC TCGGAGGAAA GTAAGAGTGA GCCGTGGGCT 
GCTCTGCTGC GCAGCACCGT GGGCGGGAAC ACGGATTGGA CCCCGAACAG TCAGCCATTA 
CCACCGCTGC CTGCTTTTCC CAGCCAGGAA TCTCTGCCTG ACCCAGAGTC CACTGTGCCT 
CCTGAGGTCT TCACTGTAGG ATCCAAGACT TTTTCCTGGA CGCCTTTTCC GCCTGCCCTT 
CGTGGCTCTG GAAGCTCCTG CCGCCTGTTA CGTTGTCCTG AAGGCTCTCC GGGGTCACCT 
GCTCCATCCC TGAAAGGATG CCCTGCACTG GATTCCCGTC AAACTCCCAG CACCCAGGAG 
TGTGTGCAGA GTCAACTTGT GTTGCTGAAC TGCCCATTGT GCCAGAAGGC ATTTGACCCG 
AAGCTGACCC AGCTAGATGT GGATAGCCAC CTTGCTCAGT GCTTGGCTGA AAGCACAGAA 
GACGTGGTGT GGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A ubiquitin-binding protein, FAAP20, links RNF8-mediated ubiquitination to the Fanconi anemia DNA repair network.
Molecular cell47(1)61-75(2012 Jul)
Yan Z,Guo R,Paramasivam M,Shen W,Ling C,Fox D 3rd,Wang Y,Oostra AB,Kuehl J,Lee DY,Takata M,Hoatlin ME,Schindler D,Joenje H,de Winter JP,Li L,Seidman MM,Wang W

FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein required for functional integrity of the FA-BRCA DNA repair pathway.
Blood119(14)3285-94(2012 Apr)
Ali AM,Pradhan A,Singh TR,Du C,Li J,Wahengbam K,Grassman E,Auerbach AD,Pang Q,Meetei AR

Fanconi anemia (FA) binding protein FAAP20 stabilizes FA complementation group A (FANCA) and participates in interstrand cross-link repair.
Proceedings of the National Academy of Sciences of the United States of America109(12)4491-6(2012 Mar)
Leung JW,Wang Y,Fong KW,Huen MS,Li L,Chen J

Regulation of Rev1 by the Fanconi anemia core complex.
Nature structural & molecular biology19(2)164-70(2012 Jan)
Kim H,Yang K,Dejsuphong D,D'Andrea AD

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Faap20 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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