Lcn5 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Lcn5
Entrez Gene ID	29552
Full Name	lipocalin 5
Synonyms	Erabp
General protein information	Preferred Names lipocalin 5 Names epididymal-specific lipocalin-5 E-RABP ESP-I androgen-dependent epididymal 18.5 kDa protein epididymal retinoic acid-binding protein epididymal secretory protein I
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 3 Map Location: 3p13
Summary	has a low galactosyltransferase modifying activity in vitro; however, this activity is predicted to be too low for physiological significance [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
NM_024136.1	NP_077050.1	epididymal-specific lipocalin-5 precursor
XM_008761580.2	XP_008759802.1	epididymal-specific lipocalin-5 isoform X1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	LOC100295548	XP_002691762.2
Mus musculus (house mouse)	Lcn5	NP_031973.2
Rattus norvegicus (Norway rat)	Lcn5	NP_077050.1

Gene Ontology
Bibliography

Related articles in PubMed

Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Newcomer ME
Structure (London, England : 1993)1(1)7-18(1993 Sep)

Structure and expression of the rat epididymal secretory protein I gene. An androgen-regulated member of the lipocalin superfamily with a rare splice donor site.
Girotti M, Jones R, Emery DC, Chia W, Hall L
The Biochemical journal281 ( Pt 1)203-10(1992 Jan)

An 18-kDa androgen-regulated protein that modifies galactosyltransferase activity is synthesized by the rat caput epididymidis, but has no structural similarity to rat milk alphalactalbumin.
Moore A, Hall L, Hamilton DW
Biology of reproduction43(3)497-506(1990 Sep)

Purification and crystallization of a retinoic acid-binding protein from rat epididymis. Identity with the major androgen-dependent epididymal proteins.
Newcomer ME, Ong DE
The Journal of biological chemistry265(22)12876-9(1990 Aug)

Molecular cloning of the cDNA for two major androgen-dependent secretory proteins of 18.5 kilodaltons synthesized by the rat epididymis.
Brooks DE, Means AR, Wright EJ, Singh SP, Tiver KK
The Journal of biological chemistry261(11)4956-61(1986 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Lcn5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Lcn5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa06802	NM_024136.1 Latest version!	Rattus norvegicus lipocalin 5 (Lcn5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
ORa06802	XM_008761580.2 Latest version!	Rattus norvegicus lipocalin 5 (Lcn5), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Lcn5 ( NM_024136.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_077050.1 Rattus norvegicus lipocalin 5 (Lcn5), mRNA.

Price & Availability↑

CloneID	ORa06802
Clone ID Related Accession (Same CDS sequence)	NM_024136.1 , XM_008761580.2
Accession Version	NM_024136.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-23
Organism	Rattus norvegicus(Norway rat)
Product	epididymal-specific lipocalin-5 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X59831.1. ##Evidence-Data-START## Transcript exon combination :: X59832.1, M12790.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02642719 [ECO:0000348] ##Evidence-Data-END##

ATGGAGAATA TCATGCCCTT CGCCTTGCTG GGACTGTGTG TGGGGCTGGC AGCTGGCACA 
GAGGGTGCAG TGGTGAAGGA CTTCGACATA AGCAAGTTTT TAGGCTTCTG GTATGAGATT 
GCCTTTGCCT CCAAGATGGG TACACCTGGC TTGGCACACA AGGAGGAGAA GATGGGAGCC 
ATGGTGGTCG AGCTGAAAGA GAACCTTCTG GCTCTGACCA CCACCTACTA CAGTGAGGAC 
CACTGTGTGC TGGAGAAGGT TACAGCTACT GAGGGGGATG GTCCGGCGAA GTTTCAGGTC 
ACCAGACTAT CAGGAAAGAA AGAAGTTGTT GTTGAAGCCA CCGACTACCT GACCTATGCC 
ATAATTGATA TCACCTCTTT GGTGGCTGGG GCAGTCCATC GGACCATGAA ACTGTACAGC 
CGGAGTTTGG ACGACAATGG GGAAGCCCTT TATAATTTCC GGAAGATAAC CTCGGACCAT 
GGCTTTTCAG AAACGGACCT ATACATCCTC AAGCATGACT TAACCTGTGT GAAGGTATTG 
CAATCGGCTG CTGAATCAAG GCCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_077050.1
CDS	45..611
Translation	MENIMPFALLGLCVGLAAGTEGAVVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVVELKENLLALTTTYYSEDHCVLEKVTATEGDGPAKFQVTRLSGKKEVVVEATDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKITSDHGFSETDLYILKHDLTCVKVLQSAAESRP

Target ORF information:

RefSeq Version	NM_024136.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus lipocalin 5 (Lcn5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_024136.1

ORF Insert Sequence:

ATGGAGAATA TCATGCCCTT CGCCTTGCTG GGACTGTGTG TGGGGCTGGC AGCTGGCACA 
GAGGGTGCAG TGGTGAAGGA CTTCGACATA AGCAAGTTTT TAGGCTTCTG GTATGAGATT 
GCCTTTGCCT CCAAGATGGG TACACCTGGC TTGGCACACA AGGAGGAGAA GATGGGAGCC 
ATGGTGGTCG AGCTGAAAGA GAACCTTCTG GCTCTGACCA CCACCTACTA CAGTGAGGAC 
CACTGTGTGC TGGAGAAGGT TACAGCTACT GAGGGGGATG GTCCGGCGAA GTTTCAGGTC 
ACCAGACTAT CAGGAAAGAA AGAAGTTGTT GTTGAAGCCA CCGACTACCT GACCTATGCC 
ATAATTGATA TCACCTCTTT GGTGGCTGGG GCAGTCCATC GGACCATGAA ACTGTACAGC 
CGGAGTTTGG ACGACAATGG GGAAGCCCTT TATAATTTCC GGAAGATAAC CTCGGACCAT 
GGCTTTTCAG AAACGGACCT ATACATCCTC AAGCATGACT TAACCTGTGT GAAGGTATTG 
CAATCGGCTG CTGAATCAAG GCCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Lcn5 ( XM_008761580.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008759802.1 Rattus norvegicus lipocalin 5 (Lcn5), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa06802
Clone ID Related Accession (Same CDS sequence)	NM_024136.1 , XM_008761580.2
Accession Version	XM_008761580.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	epididymal-specific lipocalin-5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761580.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAATA TCATGCCCTT CGCCTTGCTG GGACTGTGTG TGGGGCTGGC AGCTGGCACA 
GAGGGTGCAG TGGTGAAGGA CTTCGACATA AGCAAGTTTT TAGGCTTCTG GTATGAGATT 
GCCTTTGCCT CCAAGATGGG TACACCTGGC TTGGCACACA AGGAGGAGAA GATGGGAGCC 
ATGGTGGTCG AGCTGAAAGA GAACCTTCTG GCTCTGACCA CCACCTACTA CAGTGAGGAC 
CACTGTGTGC TGGAGAAGGT TACAGCTACT GAGGGGGATG GTCCGGCGAA GTTTCAGGTC 
ACCAGACTAT CAGGAAAGAA AGAAGTTGTT GTTGAAGCCA CCGACTACCT GACCTATGCC 
ATAATTGATA TCACCTCTTT GGTGGCTGGG GCAGTCCATC GGACCATGAA ACTGTACAGC 
CGGAGTTTGG ACGACAATGG GGAAGCCCTT TATAATTTCC GGAAGATAAC CTCGGACCAT 
GGCTTTTCAG AAACGGACCT ATACATCCTC AAGCATGACT TAACCTGTGT GAAGGTATTG 
CAATCGGCTG CTGAATCAAG GCCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008759802.1
CDS	779..1345
Translation	MENIMPFALLGLCVGLAAGTEGAVVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVVELKENLLALTTTYYSEDHCVLEKVTATEGDGPAKFQVTRLSGKKEVVVEATDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKITSDHGFSETDLYILKHDLTCVKVLQSAAESRP

Target ORF information:

RefSeq Version	XM_008761580.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus lipocalin 5 (Lcn5), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761580.2

ORF Insert Sequence:

ATGGAGAATA TCATGCCCTT CGCCTTGCTG GGACTGTGTG TGGGGCTGGC AGCTGGCACA 
GAGGGTGCAG TGGTGAAGGA CTTCGACATA AGCAAGTTTT TAGGCTTCTG GTATGAGATT 
GCCTTTGCCT CCAAGATGGG TACACCTGGC TTGGCACACA AGGAGGAGAA GATGGGAGCC 
ATGGTGGTCG AGCTGAAAGA GAACCTTCTG GCTCTGACCA CCACCTACTA CAGTGAGGAC 
CACTGTGTGC TGGAGAAGGT TACAGCTACT GAGGGGGATG GTCCGGCGAA GTTTCAGGTC 
ACCAGACTAT CAGGAAAGAA AGAAGTTGTT GTTGAAGCCA CCGACTACCT GACCTATGCC 
ATAATTGATA TCACCTCTTT GGTGGCTGGG GCAGTCCATC GGACCATGAA ACTGTACAGC 
CGGAGTTTGG ACGACAATGG GGAAGCCCTT TATAATTTCC GGAAGATAAC CTCGGACCAT 
GGCTTTTCAG AAACGGACCT ATACATCCTC AAGCATGACT TAACCTGTGT GAAGGTATTG 
CAATCGGCTG CTGAATCAAG GCCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Structure (London, England : 1993)1(1)7-18(1993 Sep)
Newcomer ME

Structure and expression of the rat epididymal secretory protein I gene. An androgen-regulated member of the lipocalin superfamily with a rare splice donor site.
The Biochemical journal281 ( Pt 1)203-10(1992 Jan)
Girotti M,Jones R,Emery DC,Chia W,Hall L

An 18-kDa androgen-regulated protein that modifies galactosyltransferase activity is synthesized by the rat caput epididymidis, but has no structural similarity to rat milk alphalactalbumin.
Biology of reproduction43(3)497-506(1990 Sep)
Moore A,Hall L,Hamilton DW

Purification and crystallization of a retinoic acid-binding protein from rat epididymis. Identity with the major androgen-dependent epididymal proteins.
The Journal of biological chemistry265(22)12876-9(1990 Aug)
Newcomer ME,Ong DE

Molecular cloning of the cDNA for two major androgen-dependent secretory proteins of 18.5 kilodaltons synthesized by the rat epididymis.
The Journal of biological chemistry261(11)4956-61(1986 Apr)
Brooks DE,Means AR,Wright EJ,Singh SP,Tiver KK