Rogdi cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rogdi
Entrez Gene ID	287061
Full Name	rogdi homolog
General protein information	Preferred Names rogdi homolog Names protein rogdi homolog leucine zipper domain protein
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q12

mRNA and Protein(s)

mRNA	Protein	Name
NM_001024864.1	NP_001020035.1	protein rogdi homolog

Pathways from BioSystems

Homologies

Homo sapiens (human)	ROGDI	NP_078865.1
Bos taurus (cattle)	ROGDI	NP_001068920.1
Gallus gallus (chicken)	ROGDI	XP_424594.3
Danio rerio (zebrafish)	rogdi	NP_956257.1
Xenopus tropicalis (tropical clawed frog)	rogdi	XP_002941090.1
Pan troglodytes (chimpanzee)	ROGDI	XP_001173850.2
Drosophila melanogaster (fruit fly)	rogdi	NP_730244.1
	ROGDI	XP_001098809.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP006653	XP_001688944.1
Canis lupus familiaris (dog)	ROGDI	XP_536986.2
Mus musculus (house mouse)	Rogdi	NP_573448.2
Rattus norvegicus (Norway rat)	Rogdi	NP_001020035.1

Gene Ontology
Bibliography

Related articles in PubMed

The Kohlsch?tter-T?nz syndrome associated gene Rogdi encodes a novel presynaptic protein.
Riemann D, Wallrafen R, Dresbach T
Scientific reports7(1)15791(2017 Nov)

A Novel Mutation in the ROGDI Gene in a Patient with Kohlsch?tter-T?nz Syndrome.
Huckert M, Mecili H, Laugel-Haushalter V, Stoetzel C, Muller J, Flori E, Laugel V, Mani?re MC, Dollfus H, Bloch-Zupan A
Molecular syndromology5(6)293-8(2014 Dec)

Molecular profiling of synaptic vesicle docking sites reveals novel proteins but few differences between glutamatergic and GABAergic synapses.
Boyken J, Gr?nborg M, Riedel D, Urlaub H, Jahn R, Chua JJ
Neuron78(2)285-97(2013 Apr)

A nonsense mutation in the human homolog of Drosophila rogdi causes Kohlschutter-Tonz syndrome.
Mory A, Dagan E, Illi B, Duquesnoy P, Mordechai S, Shahor I, Romani S, Hawash-Moustafa N, Mandel H, Valente EM, Amselem S, Gershoni-Baruch R
American journal of human genetics90(4)708-14(2012 Apr)

Genetic approach and phenotype-based complementation screening for identification of stroma cell-derived proteins involved in cell proliferation.
Tulin EE, Onoda N, Hasegawa M, Nosaka T, Nomura H, Kitamura T
Experimental cell research272(1)23-31(2002 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rogdi gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rogdi cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa06700	NM_001024864.1 Latest version!	Rattus norvegicus rogdi atypical leucine zipper (Rogdi), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$188.30 $269.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rogdi ( NM_001024864.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001020035.1 Rattus norvegicus rogdi atypical leucine zipper (Rogdi), mRNA.

Price & Availability↑

CloneID	ORa06700
Clone ID Related Accession (Same CDS sequence)	NM_001024864.1
Accession Version	NM_001024864.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-25
Organism	Rattus norvegicus(Norway rat)
Product	protein rogdi homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098001.1. On Jun 17, 2005 this sequence version replaced XM_213213.3. ##Evidence-Data-START## Transcript exon combination :: BC098001.1, FQ213298.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGCGACCG CGATGGCTGC GAGCGCCGCG GAGCGGGCAG TACTGGAGGA GGAGTTTCGC 
TGGTTGCTGC ACGCTGAGGT GCACGCCGTG CTGAGACAGC TACAGGACAT CCTTAAGGAG 
GCCTCTCTTC GCTTCACTCT CCCCGGCCCC AGCACCGAGG GTCCTGCCAA GCAGGAGAAC 
TTCATCCTGG GCAGCTGTGG CACAGACCAG GTGAAAGGGG TGCTGACTCT GCAAGGGGAT 
GCCCTCAGCC AAGCGGATGT GAACTTGAAG ATGCCTCGGA ACAACCAGTT GTTGCACTTC 
GCCTTCCGGG AGGACAAGCA GTGGAAGCTA CAGCAGATTC AGGATGCCAG GAACCACGTG 
AGCCAAGCTA TTTATCTCCT GGCAAACCGG GATGAGAGCT ACCAGTTCAA GACAGGAGCG 
GAAGTCCTCA AGCTCATGGA TGCCGTTATG CTGCAACTGA CGAGAGCCAG AAACCGGCTC 
ACTACCCCAG CCACCCTCAC CCTGCCAGAG ATTGCCGCCA GCGGCCTCAC GCGGATGTTT 
GCCCCCACCC TACCCTCTGA CCTGCTGGTC AATGTCTACA TCAACCTCAA CAAGCTGTGC 
CTCACTGTGT ACCAGCTGCA CACTCTGCAG CCCACCTCCA CCAAGAACTT CCGCCCCGCC 
GGAGGTGCAG TGCTCCACAG CCCAGGGGCA ATGTTTGAAT GGGGCTCCCA GCGCCTCGAA 
GTGAGCCACG TACACAAGGT AGAATGTGTG ATCCCCTGGC TCAACGATGC CCTAGTGTAC 
TTCACCGTCT CACTGCAGCT CTGCCAGCAG CTCAAGGATA AGATCTCTGT GTTTTCCAGC 
TACTGGAGCT CCAGGCCCTT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001020035.1
CDS	191..1054
Translation	MATAMAASAAERAVLEEEFRWLLHAEVHAVLRQLQDILKEASLRFTLPGPSTEGPAKQENFILGSCGTDQVKGVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLANRDESYQFKTGAEVLKLMDAVMLQLTRARNRLTTPATLTLPEIAASGLTRMFAPTLPSDLLVNVYINLNKLCLTVYQLHTLQPTSTKNFRPAGGAVLHSPGAMFEWGSQRLEVSHVHKVECVIPWLNDALVYFTVSLQLCQQLKDKISVFSSYWSSRPF

Target ORF information:

RefSeq Version	NM_001024864.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus rogdi atypical leucine zipper (Rogdi), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001024864.1

ORF Insert Sequence:

ATGGCGACCG CGATGGCTGC GAGCGCCGCG GAGCGGGCAG TACTGGAGGA GGAGTTTCGC 
TGGTTGCTGC ACGCTGAGGT GCACGCCGTG CTGAGACAGC TACAGGACAT CCTTAAGGAG 
GCCTCTCTTC GCTTCACTCT CCCCGGCCCC AGCACCGAGG GTCCTGCCAA GCAGGAGAAC 
TTCATCCTGG GCAGCTGTGG CACAGACCAG GTGAAAGGGG TGCTGACTCT GCAAGGGGAT 
GCCCTCAGCC AAGCGGATGT GAACTTGAAG ATGCCTCGGA ACAACCAGTT GTTGCACTTC 
GCCTTCCGGG AGGACAAGCA GTGGAAGCTA CAGCAGATTC AGGATGCCAG GAACCACGTG 
AGCCAAGCTA TTTATCTCCT GGCAAACCGG GATGAGAGCT ACCAGTTCAA GACAGGAGCG 
GAAGTCCTCA AGCTCATGGA TGCCGTTATG CTGCAACTGA CGAGAGCCAG AAACCGGCTC 
ACTACCCCAG CCACCCTCAC CCTGCCAGAG ATTGCCGCCA GCGGCCTCAC GCGGATGTTT 
GCCCCCACCC TACCCTCTGA CCTGCTGGTC AATGTCTACA TCAACCTCAA CAAGCTGTGC 
CTCACTGTGT ACCAGCTGCA CACTCTGCAG CCCACCTCCA CCAAGAACTT CCGCCCCGCC 
GGAGGTGCAG TGCTCCACAG CCCAGGGGCA ATGTTTGAAT GGGGCTCCCA GCGCCTCGAA 
GTGAGCCACG TACACAAGGT AGAATGTGTG ATCCCCTGGC TCAACGATGC CCTAGTGTAC 
TTCACCGTCT CACTGCAGCT CTGCCAGCAG CTCAAGGATA AGATCTCTGT GTTTTCCAGC 
TACTGGAGCT CCAGGCCCTT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The Kohlsch?tter-T?nz syndrome associated gene Rogdi encodes a novel presynaptic protein.
Scientific reports7(1)15791(2017 Nov)
Riemann D,Wallrafen R,Dresbach T

A Novel Mutation in the ROGDI Gene in a Patient with Kohlsch?tter-T?nz Syndrome.
Molecular syndromology5(6)293-8(2014 Dec)
Huckert M,Mecili H,Laugel-Haushalter V,Stoetzel C,Muller J,Flori E,Laugel V,Mani?re MC,Dollfus H,Bloch-Zupan A

Molecular profiling of synaptic vesicle docking sites reveals novel proteins but few differences between glutamatergic and GABAergic synapses.
Neuron78(2)285-97(2013 Apr)
Boyken J,Gr?nborg M,Riedel D,Urlaub H,Jahn R,Chua JJ

A nonsense mutation in the human homolog of Drosophila rogdi causes Kohlschutter-Tonz syndrome.
American journal of human genetics90(4)708-14(2012 Apr)
Mory A,Dagan E,Illi B,Duquesnoy P,Mordechai S,Shahor I,Romani S,Hawash-Moustafa N,Mandel H,Valente EM,Amselem S,Gershoni-Baruch R

Genetic approach and phenotype-based complementation screening for identification of stroma cell-derived proteins involved in cell proliferation.
Experimental cell research272(1)23-31(2002 Jan)
Tulin EE,Onoda N,Hasegawa M,Nosaka T,Nomura H,Kitamura T