Cd9 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cd9
Entrez Gene ID	24936
Full Name	CD9 molecule
General protein information	Preferred Names CD9 molecule Names CD9 antigen CD9 antigen (p24)
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 4 Map Location: 4q42
Summary	major platelet cell surface glycoprotein; may play a role in intercellular signaling in the nervous system [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_017592476.1	XP_017447965.1	CD9 antigen isoform X1
NM_053018.1	NP_444177.1	CD9 antigen

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CD9	XP_508947.2
Rattus norvegicus (Norway rat)	Cd9	NP_444177.1
Danio rerio (zebrafish)	cd9a	NP_997784.1
Gallus gallus (chicken)	CD9	NP_990093.1
Canis lupus familiaris (dog)	CD9	XP_005637497.1
Bos taurus (cattle)	CD9	NP_776325.1
Homo sapiens (human)	CD9	NP_001760.1
Mus musculus (house mouse)	Cd9	NP_031683.1
Xenopus tropicalis (tropical clawed frog)	cd9	NP_001016989.1

Gene Ontology
Bibliography

Related articles in PubMed

The CD9, CD81, and CD151 EC2 domains bind to the classical RGD-binding site of integrin ?v?3.
Yu J, Lee CY, Changou CA, Cedano-Prieto DM, Takada YK, Takada Y
The Biochemical journal474(4)589-596(2017 02)

Exosomes secreted from GATA-4 overexpressing mesenchymal stem cells serve as a reservoir of anti-apoptotic microRNAs for cardioprotection.
Yu B, Kim HW, Gong M, Wang J, Millard RW, Wang Y, Ashraf M, Xu M
International journal of cardiology182349-60(2015 Mar)

Identification of alternative transcripts of rat CD9 expressed by tumorigenic neural cell lines and in normal tissues.
Wolfahrt S, Herman S, Scholz CJ, Sauer G, Deissler H
Genetics and molecular biology36(2)276-81(2013 Jul)

Profiling circulating microRNA expression in experimental sepsis using cecal ligation and puncture.
Wu SC, Yang JC, Rau CS, Chen YC, Lu TH, Lin MW, Tzeng SL, Wu YC, Wu CJ, Hsieh CH
PloS one8(10)e77936(2013)

Characterization of rat NCA/CD9 cell surface antigen and its expression by normal and malignant neural cells.
Deissler H, Blass-Kampmann S, Kindler-R?hrborn A, Meyer HE, Rajewsky MF
Journal of neuroscience research43(6)664-74(1996 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

chemotaxis toward antigen is controlled in mast cells by a cross-talk among FcepsilonRI, tetraspanin CD9, transmembrane adaptor proteins NTAL and LAT, and cytoskeleton-regulatory proteins of the ERM family
Title: Cross-talk between tetraspanin CD9 and transmembrane adaptor protein non-T cell activation linker (NTAL) in mast cell activation and chemotaxis.

During spermatogenic cell apoptosis, integrin beta1, alpha3, and alpha6 subunits, and tetraspanins CD9 and C81 become displaced away from the developing apoptotic bodies.
Title: Role of integrins, tetraspanins, and ADAM proteins during the development of apoptotic bodies by spermatogenic cells.

The following Cd9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cd9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa13138	NM_053018.1 Latest version!	Rattus norvegicus CD9 molecule (Cd9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$188.30 $269.00
ORa60756	XM_017592476.1 Latest version!	Rattus norvegicus CD9 molecule (Cd9), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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5 or more Clone	50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cd9 ( NM_053018.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_444177.1 Rattus norvegicus CD9 molecule (Cd9), mRNA.

Price & Availability↑

CloneID	ORa13138
Clone ID Related Accession (Same CDS sequence)	NM_053018.1
Accession Version	NM_053018.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-25
Organism	Rattus norvegicus(Norway rat)
Product	CD9 antigen
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CF111078.1, X76489.1, BG670145.1 and BQ202980.1. On May 24, 2007 this sequence version replaced XM_001063955.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: CF111078.1, FQ220476.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGCCGGTCA AAGGAGGTAG CAAGTGCATC AAATACCTGC TCTTTGGATT TAACTTCATC 
TTCTGGCTCG CCGGCATCGC AGTGCTTGCC ATTGGACTAT GGCTGCGGTT CGACTCTCAG 
ACCAAGAGCA TCTTCGAGCA AGAAACTAAT CATTCCAGCT TCTACACAGG AGTGTACATT 
CTGATTGGAG CTGGGGCCCT CATGATGCTA GTTGGTTTCC TGGGCTGCTG TGGAGCTGTA 
CAAGAGTCAC AGTGCATGCT GGGATTGTTC TTCGGATTCC TCTTGGTGAT ATTCGCCATT 
GAGATCGCCG CAGCCGTCTG GGGCTATACC CACAAGGACG AGGTGATTAA AGAACTCCAG 
GAGTTTTACA AGGACACCTA CCAAAAGTTA AGGAACAAGG ATGAGCCCCA GCGGGAAACA 
CTCAAAGCCA TCCATATGGC GTTGAACTGC TGTGGCATAG CTGGTGGTGT GGAGCAGTTT 
ATCTCGGACA TCTGCCCCAA AAAGCAGGTT CTGGAATCCT TCCAGGTTAA GTCCTGCCCG 
GATGCCATCG ATGAGGTCTT CCACAGCAAG TTCCACATCA TTGGAGCAGT GGGCATCGGT 
ATCGCCGTGG TGATGATCTT CGGTATGATT TTCAGCATGA TTCTGTGCTG CGCCATCCGC 
AGGAGCCGAG AAATGGTCTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_444177.1
CDS	62..742
Translation	MPVKGGSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRNKDEPQRETLKAIHMALNCCGIAGGVEQFISDICPKKQVLESFQVKSCPDAIDEVFHSKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRSREMV

Target ORF information:

RefSeq Version	NM_053018.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus CD9 molecule (Cd9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_053018.1

ORF Insert Sequence:

ATGCCGGTCA AAGGAGGTAG CAAGTGCATC AAATACCTGC TCTTTGGATT TAACTTCATC 
TTCTGGCTCG CCGGCATCGC AGTGCTTGCC ATTGGACTAT GGCTGCGGTT CGACTCTCAG 
ACCAAGAGCA TCTTCGAGCA AGAAACTAAT CATTCCAGCT TCTACACAGG AGTGTACATT 
CTGATTGGAG CTGGGGCCCT CATGATGCTA GTTGGTTTCC TGGGCTGCTG TGGAGCTGTA 
CAAGAGTCAC AGTGCATGCT GGGATTGTTC TTCGGATTCC TCTTGGTGAT ATTCGCCATT 
GAGATCGCCG CAGCCGTCTG GGGCTATACC CACAAGGACG AGGTGATTAA AGAACTCCAG 
GAGTTTTACA AGGACACCTA CCAAAAGTTA AGGAACAAGG ATGAGCCCCA GCGGGAAACA 
CTCAAAGCCA TCCATATGGC GTTGAACTGC TGTGGCATAG CTGGTGGTGT GGAGCAGTTT 
ATCTCGGACA TCTGCCCCAA AAAGCAGGTT CTGGAATCCT TCCAGGTTAA GTCCTGCCCG 
GATGCCATCG ATGAGGTCTT CCACAGCAAG TTCCACATCA TTGGAGCAGT GGGCATCGGT 
ATCGCCGTGG TGATGATCTT CGGTATGATT TTCAGCATGA TTCTGTGCTG CGCCATCCGC 
AGGAGCCGAG AAATGGTCTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cd9 ( XM_017592476.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017447965.1 Rattus norvegicus CD9 molecule (Cd9), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa60756
Clone ID Related Accession (Same CDS sequence)	XM_017592476.1
Accession Version	XM_017592476.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 633bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	CD9 antigen isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACTTCT TCTTCTGGCT CGCCGGCATC GCAGTGCTTG CCATTGGACT ATGGCTGCGG 
TTCGACTCTC AGACCAAGAG CATCTTCGAG CAAGAAACTA ATCATTCCAG CTTCTACACA 
GGAGTGTACA TTCTGATTGG AGCTGGGGCC CTCATGATGC TAGTTGGTTT CCTGGGCTGC 
TGTGGAGCTG TACAAGAGTC ACAGTGCATG CTGGGATTGT TCTTCGGATT CCTCTTGGTG 
ATATTCGCCA TTGAGATCGC CGCAGCCGTC TGGGGCTATA CCCACAAGGA CGAGGTGATT 
AAAGAACTCC AGGAGTTTTA CAAGGACACC TACCAAAAGT TAAGGAACAA GGATGAGCCC 
CAGCGGGAAA CACTCAAAGC CATCCATATG GCGTTGAACT GCTGTGGCAT AGCTGGTGGT 
GTGGAGCAGT TTATCTCGGA CATCTGCCCC AAAAAGCAGG TTCTGGAATC CTTCCAGGTT 
AAGTCCTGCC CGGATGCCAT CGATGAGGTC TTCCACAGCA AGTTCCACAT CATTGGAGCA 
GTGGGCATCG GTATCGCCGT GGTGATGATC TTCGGTATGA TTTTCAGCAT GATTCTGTGC 
TGCGCCATCC GCAGGAGCCG AGAAATGGTC TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017447965.1
CDS	16..648
Translation	MNFFFWLAGIAVLAIGLWLRFDSQTKSIFEQETNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRNKDEPQRETLKAIHMALNCCGIAGGVEQFISDICPKKQVLESFQVKSCPDAIDEVFHSKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRSREMV

Target ORF information:

RefSeq Version	XM_017592476.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus CD9 molecule (Cd9), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017592476.1

ORF Insert Sequence:

ATGAACTTCT TCTTCTGGCT CGCCGGCATC GCAGTGCTTG CCATTGGACT ATGGCTGCGG 
TTCGACTCTC AGACCAAGAG CATCTTCGAG CAAGAAACTA ATCATTCCAG CTTCTACACA 
GGAGTGTACA TTCTGATTGG AGCTGGGGCC CTCATGATGC TAGTTGGTTT CCTGGGCTGC 
TGTGGAGCTG TACAAGAGTC ACAGTGCATG CTGGGATTGT TCTTCGGATT CCTCTTGGTG 
ATATTCGCCA TTGAGATCGC CGCAGCCGTC TGGGGCTATA CCCACAAGGA CGAGGTGATT 
AAAGAACTCC AGGAGTTTTA CAAGGACACC TACCAAAAGT TAAGGAACAA GGATGAGCCC 
CAGCGGGAAA CACTCAAAGC CATCCATATG GCGTTGAACT GCTGTGGCAT AGCTGGTGGT 
GTGGAGCAGT TTATCTCGGA CATCTGCCCC AAAAAGCAGG TTCTGGAATC CTTCCAGGTT 
AAGTCCTGCC CGGATGCCAT CGATGAGGTC TTCCACAGCA AGTTCCACAT CATTGGAGCA 
GTGGGCATCG GTATCGCCGT GGTGATGATC TTCGGTATGA TTTTCAGCAT GATTCTGTGC 
TGCGCCATCC GCAGGAGCCG AGAAATGGTC TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The CD9, CD81, and CD151 EC2 domains bind to the classical RGD-binding site of integrin ?v?3.
The Biochemical journal474(4)589-596(2017 02)
Yu J,Lee CY,Changou CA,Cedano-Prieto DM,Takada YK,Takada Y

Exosomes secreted from GATA-4 overexpressing mesenchymal stem cells serve as a reservoir of anti-apoptotic microRNAs for cardioprotection.
International journal of cardiology182349-60(2015 Mar)
Yu B,Kim HW,Gong M,Wang J,Millard RW,Wang Y,Ashraf M,Xu M

Identification of alternative transcripts of rat CD9 expressed by tumorigenic neural cell lines and in normal tissues.
Genetics and molecular biology36(2)276-81(2013 Jul)
Wolfahrt S,Herman S,Scholz CJ,Sauer G,Deissler H

Profiling circulating microRNA expression in experimental sepsis using cecal ligation and puncture.
PloS one8(10)e77936(2013)
Wu SC,Yang JC,Rau CS,Chen YC,Lu TH,Lin MW,Tzeng SL,Wu YC,Wu CJ,Hsieh CH

Characterization of rat NCA/CD9 cell surface antigen and its expression by normal and malignant neural cells.
Journal of neuroscience research43(6)664-74(1996 Mar)
Deissler H,Blass-Kampmann S,Kindler-R?hrborn A,Meyer HE,Rajewsky MF